hub GCF_902374465.1 genome assembly shortLabel Ralstonia pickettii (2019) longLabel Ralstonia pickettii (2019)/Ralstonia pickettii/GCF_902374465.1_MGYG-HGUT-01384 genome assembly useOneFile on email genome-www@soe.ucsc.edu descriptionUrl html/GCF_902374465.1_MGYG-HGUT-01384.description.html genome GCF_902374465.1 taxId 329 groups groups.txt description Ralstonia pickettii (2019) twoBitPath GCF_902374465.1.2bit twoBitBptUrl GCF_902374465.1.2bit.bpt chromSizes GCF_902374465.1.chrom.sizes.txt chromAliasBb GCF_902374465.1.chromAlias.bb organism MGYG-HGUT-01384 Aug. 2019 defaultPos NZ_CABKQE010000001.1:724585-734585 scientificName Ralstonia pickettii htmlPath html/GCF_902374465.1_MGYG-HGUT-01384.description.html blat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/902/374/465/GCF_902374465.1 transBlat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/902/374/465/GCF_902374465.1 isPcr dynablat-01.soe.ucsc.edu 4040 dynamic GCF/902/374/465/GCF_902374465.1 track assembly longLabel Assembly shortLabel Assembly visibility hide colorByStrand 150,100,30 230,170,40 color 150,100,30 altColor 230,170,40 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.assembly.bb type bigBed 6 html html/GCF_902374465.1_MGYG-HGUT-01384.assembly searchIndex name searchTrix ixIxx/GCF_902374465.1_MGYG-HGUT-01384.assembly.ix url https://www.ncbi.nlm.nih.gov/nuccore/$$ urlLabel NCBI Nucleotide database: group map track cytoBandIdeo shortLabel Chromosome Band (Ideogram) longLabel Ideogram for Orientation group map visibility dense type bigBed 4 + bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.cytoBand.bb track gc5Base shortLabel GC Percent longLabel GC Percent in 5-Base Windows group map visibility dense autoScale Off maxHeightPixels 128:36:16 graphTypeDefault Bar gridDefault OFF windowingFunction Mean color 0,0,0 altColor 128,128,128 viewLimits 30:70 type bigWig 0 100 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.gc5Base.bw html html/GCF_902374465.1_MGYG-HGUT-01384.gc5Base track tanDups shortLabel Tandem Dups longLabel Paired identical sequences compositeTrack on visibility hide type bigBed 12 group map html html/GCF_902374465.1_MGYG-HGUT-01384.tanDups track gapOverlap parent tanDups on shortLabel Gap Overlaps longLabel Paired exactly identical sequence on each side of a gap bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.gapOverlap.bb type bigBed 12 track tandemDups parent tanDups on shortLabel Tandem Dups longLabel Paired exactly identical sequence survey over entire genome assembly bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.tandemDups.bb type bigBed 12 track simpleRepeat shortLabel Simple Repeats longLabel Simple Tandem Repeats by TRF group varRep visibility dense type bigBed 4 + bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.simpleRepeat.bb html html/GCF_902374465.1_MGYG-HGUT-01384.simpleRepeat track ncbiGene longLabel NCBI gene predictions shortLabel NCBI Genes visibility pack color 0,80,150 altColor 150,80,0 colorByStrand 0,80,150 150,80,0 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.ncbiGene.bb type bigGenePred urls name2="https://www.ncbi.nlm.nih.gov/gene/?term=$$" geneName="https://www.ncbi.nlm.nih.gov/gene/$$" geneName2="https://www.ncbi.nlm.nih.gov/nuccore/$$" html html/GCF_902374465.1_MGYG-HGUT-01384.ncbiGene searchIndex name searchTrix ixIxx/GCF_902374465.1_MGYG-HGUT-01384.ncbiGene.ix urlLabel Entrez gene: labelFields name,geneName,geneName2 defaultLabelFields geneName2 group genes track cpgIslands compositeTrack on shortLabel CpG Islands longLabel CpG Islands (Islands < 300 Bases are Light Green) group regulation visibility dense type bigBed 4 + html html/GCF_902374465.1_MGYG-HGUT-01384.cpgIslands track cpgIslandExt parent cpgIslands off shortLabel CpG Islands longLabel CpG Islands (Islands < 300 Bases are Light Green) type bigBed 4 + priority 1 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.cpgIslandExt.bb track cpgIslandExtUnmasked parent cpgIslands on shortLabel Unmasked CpG longLabel CpG Islands on All Sequence (Islands < 300 Bases are Light Green) type bigBed 4 + priority 2 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.cpgIslandExtUnmasked.bb track windowMasker shortLabel WM + SDust longLabel Genomic Intervals Masked by WindowMasker + SDust group varRep visibility dense type bigBed 3 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.windowMasker.bb html html/GCF_902374465.1_MGYG-HGUT-01384.windowMasker track allGaps shortLabel All Gaps longLabel All gaps of unknown nucleotides (N's), including AGP annotated gaps group map visibility hide type bigBed 3 bigDataUrl bbi/GCF_902374465.1_MGYG-HGUT-01384.allGaps.bb html html/GCF_902374465.1_MGYG-HGUT-01384.allGaps