# Assembly name: aGeoSer1.1 # Organism name: Geotrypetes seraphini (caecilians) # Taxid: 260995 # BioSample: SAMEA104387963 # BioProject: PRJEB33992 # Submitter: SC # Date: 2019-08-18 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CABPRQ01 # Genome coverage: 67x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_902459505.1 # RefSeq assembly accession: GCF_902459505.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_902459495.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_902459504.1 GCF_902459504.1 Primary Assembly ## GCF_012597735.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Super_scaffold_4 assembled-molecule 1 Chromosome LR699146.1 = NC_047084.1 Primary Assembly 550518975 na Super_scaffold_3 assembled-molecule 2 Chromosome LR699147.1 = NC_047085.1 Primary Assembly 529596002 na Super_scaffold_1 assembled-molecule 3 Chromosome LR699148.1 = NC_047086.1 Primary Assembly 413748038 na Super_scaffold_2 assembled-molecule 4 Chromosome LR699149.1 = NC_047087.1 Primary Assembly 326378286 na Super_scaffold_11 assembled-molecule 5 Chromosome LR699150.1 = NC_047088.1 Primary Assembly 272612222 na Super_scaffold_7 assembled-molecule 6 Chromosome LR699151.1 = NC_047089.1 Primary Assembly 260396842 na Super_scaffold_5 assembled-molecule 7 Chromosome LR699152.1 = NC_047090.1 Primary Assembly 197956435 na Super_scaffold_10 assembled-molecule 8 Chromosome LR699153.1 = NC_047091.1 Primary Assembly 193861807 na Super_scaffold_6 assembled-molecule 9 Chromosome LR699154.1 = NC_047092.1 Primary Assembly 190287894 na Super_scaffold_8 assembled-molecule 10 Chromosome LR699155.1 = NC_047093.1 Primary Assembly 146679521 na Super_scaffold_9 assembled-molecule 11 Chromosome LR699156.1 = NC_047094.1 Primary Assembly 141378785 na Super_scaffold_12 assembled-molecule 12 Chromosome LR699157.1 = NC_047095.1 Primary Assembly 120913266 na Super_scaffold_15 assembled-molecule 13 Chromosome LR699158.1 = NC_047096.1 Primary Assembly 83871185 na Super_scaffold_16 assembled-molecule 14 Chromosome LR699159.1 = NC_047097.1 Primary Assembly 77083272 na Super_scaffold_13 assembled-molecule 15 Chromosome LR699160.1 = NC_047098.1 Primary Assembly 72115941 na Super_scaffold_14 assembled-molecule 16 Chromosome LR699161.1 = NC_047099.1 Primary Assembly 55233140 na Super_scaffold_18 assembled-molecule 17 Chromosome LR699162.1 = NC_047100.1 Primary Assembly 51856302 na Super_scaffold_17 assembled-molecule 18 Chromosome LR699163.1 = NC_047101.1 Primary Assembly 48055223 na Super_scaffold_19 assembled-molecule 19 Chromosome LR699164.1 = NC_047102.1 Primary Assembly 41053462 na contig1 unplaced-scaffold na na CABPRQ010000001.1 = NW_022985840.1 Primary Assembly 102122 na contig2 unplaced-scaffold na na CABPRQ010000002.1 = NW_022985841.1 Primary Assembly 95532 na contig3 unplaced-scaffold na na CABPRQ010000003.1 = NW_022985842.1 Primary Assembly 92114 na contig4 unplaced-scaffold na na CABPRQ010000004.1 = NW_022985843.1 Primary Assembly 89192 na contig5 unplaced-scaffold na na CABPRQ010000005.1 = NW_022985844.1 Primary Assembly 86707 na contig6 unplaced-scaffold na na CABPRQ010000006.1 = NW_022985845.1 Primary Assembly 83285 na contig7 unplaced-scaffold na na CABPRQ010000007.1 = NW_022985846.1 Primary Assembly 82427 na contig8 unplaced-scaffold na na CABPRQ010000008.1 = NW_022985847.1 Primary Assembly 81035 na contig9 unplaced-scaffold na na CABPRQ010000009.1 = NW_022985848.1 Primary Assembly 77195 na contig10 unplaced-scaffold na na CABPRQ010000010.1 = NW_022985849.1 Primary Assembly 70611 na contig11 unplaced-scaffold na na CABPRQ010000011.1 = NW_022985850.1 Primary Assembly 62060 na contig12 unplaced-scaffold na na CABPRQ010000012.1 = NW_022985851.1 Primary Assembly 61641 na contig13 unplaced-scaffold na na CABPRQ010000013.1 = NW_022985852.1 Primary Assembly 61882 na contig14 unplaced-scaffold na na CABPRQ010000014.1 = NW_022985853.1 Primary Assembly 62011 na contig15 unplaced-scaffold na na CABPRQ010000015.1 = NW_022985854.1 Primary Assembly 60811 na contig16 unplaced-scaffold na na CABPRQ010000016.1 = NW_022985855.1 Primary Assembly 59551 na contig17 unplaced-scaffold na na CABPRQ010000017.1 = NW_022985856.1 Primary Assembly 58659 na contig18 unplaced-scaffold na na CABPRQ010000018.1 = NW_022985857.1 Primary Assembly 57909 na contig19 unplaced-scaffold na na CABPRQ010000019.1 = NW_022985858.1 Primary Assembly 57504 na contig20 unplaced-scaffold na na CABPRQ010000020.1 = NW_022985859.1 Primary Assembly 56745 na contig21 unplaced-scaffold na na CABPRQ010000021.1 = NW_022985860.1 Primary Assembly 56711 na contig22 unplaced-scaffold na na CABPRQ010000022.1 = NW_022985861.1 Primary Assembly 56552 na contig23 unplaced-scaffold na na CABPRQ010000023.1 = NW_022985862.1 Primary Assembly 56168 na contig24 unplaced-scaffold na na CABPRQ010000024.1 = NW_022985863.1 Primary Assembly 54492 na contig25 unplaced-scaffold na na CABPRQ010000025.1 = NW_022985864.1 Primary Assembly 54258 na contig26 unplaced-scaffold na na CABPRQ010000026.1 = NW_022985865.1 Primary Assembly 52736 na contig27 unplaced-scaffold na na CABPRQ010000027.1 = NW_022985866.1 Primary Assembly 52086 na contig28 unplaced-scaffold na na CABPRQ010000028.1 = NW_022985867.1 Primary Assembly 52098 na contig29 unplaced-scaffold na na CABPRQ010000029.1 = NW_022985868.1 Primary Assembly 51836 na contig30 unplaced-scaffold na na CABPRQ010000030.1 = NW_022985869.1 Primary Assembly 51298 na contig31 unplaced-scaffold na na CABPRQ010000031.1 = NW_022985870.1 Primary Assembly 49464 na contig32 unplaced-scaffold na na CABPRQ010000032.1 = NW_022985871.1 Primary Assembly 48283 na contig33 unplaced-scaffold na na CABPRQ010000033.1 = NW_022985872.1 Primary Assembly 48067 na contig34 unplaced-scaffold na na CABPRQ010000034.1 = NW_022985873.1 Primary Assembly 46644 na contig35 unplaced-scaffold na na CABPRQ010000035.1 = NW_022985874.1 Primary Assembly 44871 na contig36 unplaced-scaffold na na CABPRQ010000036.1 = NW_022985875.1 Primary Assembly 43968 na contig37 unplaced-scaffold na na CABPRQ010000037.1 = NW_022985876.1 Primary Assembly 43070 na contig38 unplaced-scaffold na na CABPRQ010000038.1 = NW_022985877.1 Primary Assembly 43616 na contig39 unplaced-scaffold na na CABPRQ010000039.1 = NW_022985878.1 Primary Assembly 43399 na contig40 unplaced-scaffold na na CABPRQ010000040.1 = NW_022985879.1 Primary Assembly 43127 na contig41 unplaced-scaffold na na CABPRQ010000041.1 = NW_022985880.1 Primary Assembly 42255 na contig42 unplaced-scaffold na na CABPRQ010000042.1 = NW_022985881.1 Primary Assembly 41439 na contig43 unplaced-scaffold na na CABPRQ010000043.1 = NW_022985882.1 Primary Assembly 41335 na contig44 unplaced-scaffold na na CABPRQ010000044.1 = NW_022985883.1 Primary Assembly 41189 na contig45 unplaced-scaffold na na CABPRQ010000045.1 = NW_022985884.1 Primary Assembly 39860 na contig46 unplaced-scaffold na na CABPRQ010000046.1 = NW_022985885.1 Primary Assembly 39613 na contig47 unplaced-scaffold na na CABPRQ010000047.1 = NW_022985886.1 Primary Assembly 38346 na contig48 unplaced-scaffold na na CABPRQ010000048.1 = NW_022985887.1 Primary Assembly 37368 na contig49 unplaced-scaffold na na CABPRQ010000049.1 = NW_022985888.1 Primary Assembly 37288 na contig50 unplaced-scaffold na na CABPRQ010000050.1 = NW_022985889.1 Primary Assembly 36837 na contig51 unplaced-scaffold na na CABPRQ010000051.1 = NW_022985890.1 Primary Assembly 36185 na contig52 unplaced-scaffold na na CABPRQ010000052.1 = NW_022985891.1 Primary Assembly 36197 na contig53 unplaced-scaffold na na CABPRQ010000053.1 = NW_022985892.1 Primary Assembly 36179 na contig54 unplaced-scaffold na na CABPRQ010000054.1 = NW_022985893.1 Primary Assembly 35949 na contig55 unplaced-scaffold na na CABPRQ010000055.1 = NW_022985894.1 Primary Assembly 36286 na contig56 unplaced-scaffold na na CABPRQ010000056.1 = NW_022985895.1 Primary Assembly 35746 na contig57 unplaced-scaffold na na CABPRQ010000057.1 = NW_022985896.1 Primary Assembly 34509 na contig58 unplaced-scaffold na na CABPRQ010000058.1 = NW_022985897.1 Primary Assembly 33884 na contig59 unplaced-scaffold na na CABPRQ010000059.1 = NW_022985898.1 Primary Assembly 33712 na contig60 unplaced-scaffold na na CABPRQ010000060.1 = NW_022985899.1 Primary Assembly 32856 na contig61 unplaced-scaffold na na CABPRQ010000061.1 = NW_022985900.1 Primary Assembly 32693 na contig62 unplaced-scaffold na na CABPRQ010000062.1 = NW_022985901.1 Primary Assembly 32229 na contig63 unplaced-scaffold na na CABPRQ010000063.1 = NW_022985902.1 Primary Assembly 32021 na contig64 unplaced-scaffold na na CABPRQ010000064.1 = NW_022985903.1 Primary Assembly 31999 na contig65 unplaced-scaffold na na CABPRQ010000065.1 = NW_022985904.1 Primary Assembly 31462 na contig66 unplaced-scaffold na na CABPRQ010000066.1 = NW_022985905.1 Primary Assembly 31433 na contig67 unplaced-scaffold na na CABPRQ010000067.1 = NW_022985906.1 Primary Assembly 29833 na contig68 unplaced-scaffold na na CABPRQ010000068.1 = NW_022985907.1 Primary Assembly 29386 na contig69 unplaced-scaffold na na CABPRQ010000069.1 = NW_022985908.1 Primary Assembly 29012 na contig70 unplaced-scaffold na na CABPRQ010000070.1 = NW_022985909.1 Primary Assembly 27577 na contig71 unplaced-scaffold na na CABPRQ010000071.1 = NW_022985910.1 Primary Assembly 27522 na contig72 unplaced-scaffold na na CABPRQ010000072.1 = NW_022985911.1 Primary Assembly 27410 na contig73 unplaced-scaffold na na CABPRQ010000073.1 = NW_022985912.1 Primary Assembly 27143 na contig74 unplaced-scaffold na na CABPRQ010000074.1 = NW_022985913.1 Primary Assembly 27258 na contig75 unplaced-scaffold na na CABPRQ010000075.1 = NW_022985914.1 Primary Assembly 26993 na contig76 unplaced-scaffold na na CABPRQ010000076.1 = NW_022985915.1 Primary Assembly 26827 na contig77 unplaced-scaffold na na CABPRQ010000077.1 = NW_022985916.1 Primary Assembly 26493 na contig78 unplaced-scaffold na na CABPRQ010000078.1 = NW_022985917.1 Primary Assembly 26474 na contig79 unplaced-scaffold na na CABPRQ010000079.1 = NW_022985918.1 Primary Assembly 26067 na contig80 unplaced-scaffold na na CABPRQ010000080.1 = NW_022985919.1 Primary Assembly 25325 na contig81 unplaced-scaffold na na CABPRQ010000081.1 = NW_022985920.1 Primary Assembly 24908 na contig82 unplaced-scaffold na na CABPRQ010000082.1 = NW_022985921.1 Primary Assembly 24757 na contig83 unplaced-scaffold na na CABPRQ010000083.1 = NW_022985922.1 Primary Assembly 24690 na contig84 unplaced-scaffold na na CABPRQ010000084.1 = NW_022985923.1 Primary Assembly 24490 na contig85 unplaced-scaffold na na CABPRQ010000085.1 = NW_022985924.1 Primary Assembly 24369 na contig86 unplaced-scaffold na na CABPRQ010000086.1 = NW_022985925.1 Primary Assembly 24434 na contig87 unplaced-scaffold na na CABPRQ010000087.1 = NW_022985926.1 Primary Assembly 24284 na contig88 unplaced-scaffold na na CABPRQ010000088.1 = NW_022985927.1 Primary Assembly 24238 na contig89 unplaced-scaffold na na CABPRQ010000089.1 = NW_022985928.1 Primary Assembly 23916 na contig90 unplaced-scaffold na na CABPRQ010000090.1 = NW_022985929.1 Primary Assembly 23324 na contig91 unplaced-scaffold na na CABPRQ010000091.1 = NW_022985930.1 Primary Assembly 23143 na contig92 unplaced-scaffold na na CABPRQ010000092.1 = NW_022985931.1 Primary Assembly 22846 na contig93 unplaced-scaffold na na CABPRQ010000093.1 = NW_022985932.1 Primary Assembly 22848 na contig94 unplaced-scaffold na na CABPRQ010000094.1 = NW_022985933.1 Primary Assembly 22701 na contig95 unplaced-scaffold na na CABPRQ010000095.1 = NW_022985934.1 Primary Assembly 22550 na contig96 unplaced-scaffold na na CABPRQ010000096.1 = NW_022985935.1 Primary Assembly 21797 na contig97 unplaced-scaffold na na CABPRQ010000097.1 = NW_022985936.1 Primary Assembly 21665 na contig98 unplaced-scaffold na na CABPRQ010000098.1 = NW_022985937.1 Primary Assembly 21650 na contig99 unplaced-scaffold na na CABPRQ010000099.1 = NW_022985938.1 Primary Assembly 21318 na contig100 unplaced-scaffold na na CABPRQ010000100.1 = NW_022985939.1 Primary Assembly 20993 na contig101 unplaced-scaffold na na CABPRQ010000101.1 = NW_022985940.1 Primary Assembly 20754 na contig102 unplaced-scaffold na na CABPRQ010000102.1 = NW_022985941.1 Primary Assembly 20405 na contig103 unplaced-scaffold na na CABPRQ010000103.1 = NW_022985942.1 Primary Assembly 20310 na contig104 unplaced-scaffold na na CABPRQ010000104.1 = NW_022985943.1 Primary Assembly 19892 na contig105 unplaced-scaffold na na CABPRQ010000105.1 = NW_022985944.1 Primary Assembly 19753 na contig106 unplaced-scaffold na na CABPRQ010000106.1 = NW_022985945.1 Primary Assembly 19102 na contig107 unplaced-scaffold na na CABPRQ010000107.1 = NW_022985946.1 Primary Assembly 18097 na contig108 unplaced-scaffold na na CABPRQ010000108.1 = NW_022985947.1 Primary Assembly 18519 na contig109 unplaced-scaffold na na CABPRQ010000109.1 = NW_022985948.1 Primary Assembly 18309 na contig110 unplaced-scaffold na na CABPRQ010000110.1 = NW_022985949.1 Primary Assembly 18047 na contig111 unplaced-scaffold na na CABPRQ010000111.1 = NW_022985950.1 Primary Assembly 18024 na contig112 unplaced-scaffold na na CABPRQ010000112.1 = NW_022985951.1 Primary Assembly 17843 na contig113 unplaced-scaffold na na CABPRQ010000113.1 = NW_022985952.1 Primary Assembly 17555 na contig114 unplaced-scaffold na na CABPRQ010000114.1 = NW_022985953.1 Primary Assembly 17376 na contig115 unplaced-scaffold na na CABPRQ010000115.1 = NW_022985954.1 Primary Assembly 17325 na contig116 unplaced-scaffold na na CABPRQ010000116.1 = NW_022985955.1 Primary Assembly 17293 na contig117 unplaced-scaffold na na CABPRQ010000117.1 = NW_022985956.1 Primary Assembly 17123 na contig118 unplaced-scaffold na na CABPRQ010000118.1 = NW_022985957.1 Primary Assembly 17027 na contig119 unplaced-scaffold na na CABPRQ010000119.1 = NW_022985958.1 Primary Assembly 16954 na contig120 unplaced-scaffold na na CABPRQ010000120.1 = NW_022985959.1 Primary Assembly 16648 na contig121 unplaced-scaffold na na CABPRQ010000121.1 = NW_022985960.1 Primary Assembly 16240 na contig122 unplaced-scaffold na na CABPRQ010000122.1 = NW_022985961.1 Primary Assembly 16156 na contig123 unplaced-scaffold na na CABPRQ010000123.1 = NW_022985962.1 Primary Assembly 16075 na contig124 unplaced-scaffold na na CABPRQ010000124.1 = NW_022985963.1 Primary Assembly 15933 na contig125 unplaced-scaffold na na CABPRQ010000125.1 = NW_022985964.1 Primary Assembly 15902 na contig126 unplaced-scaffold na na CABPRQ010000126.1 = NW_022985965.1 Primary Assembly 15750 na contig127 unplaced-scaffold na na CABPRQ010000127.1 = NW_022985966.1 Primary Assembly 15139 na contig128 unplaced-scaffold na na CABPRQ010000128.1 = NW_022985967.1 Primary Assembly 15151 na contig129 unplaced-scaffold na na CABPRQ010000129.1 = NW_022985968.1 Primary Assembly 14909 na contig130 unplaced-scaffold na na CABPRQ010000130.1 = NW_022985969.1 Primary Assembly 14077 na contig131 unplaced-scaffold na na CABPRQ010000131.1 = NW_022985970.1 Primary Assembly 14436 na contig132 unplaced-scaffold na na CABPRQ010000132.1 = NW_022985971.1 Primary Assembly 13156 na contig133 unplaced-scaffold na na CABPRQ010000133.1 = NW_022985972.1 Primary Assembly 10189 na contig134 unplaced-scaffold na na CABPRQ010000134.1 = NW_022985973.1 Primary Assembly 10179 na contig135 unplaced-scaffold na na CABPRQ010000135.1 = NW_022985974.1 Primary Assembly 6895 na contig136 unplaced-scaffold na na CABPRQ010000136.1 = NW_022985975.1 Primary Assembly 6845 na contig137 unplaced-scaffold na na CABPRQ010000137.1 = NW_022985976.1 Primary Assembly 6016 na contig138 unplaced-scaffold na na CABPRQ010000138.1 = NW_022985977.1 Primary Assembly 3941 na contig139 unplaced-scaffold na na CABPRQ010000139.1 = NW_022985978.1 Primary Assembly 2557 na contig140 unplaced-scaffold na na CABPRQ010000140.1 = NW_022985979.1 Primary Assembly 2393 na contig141 unplaced-scaffold na na CABPRQ010000141.1 = NW_022985980.1 Primary Assembly 399123 na contig142 unplaced-scaffold na na CABPRQ010000142.1 = NW_022985981.1 Primary Assembly 238679 na contig143 unplaced-scaffold na na CABPRQ010000143.1 = NW_022985982.1 Primary Assembly 200511 na contig144 unplaced-scaffold na na CABPRQ010000144.1 = NW_022985983.1 Primary Assembly 141672 na MT assembled-molecule MT Mitochondrion na <> NC_020155.1 non-nuclear 16293 na