# Assembly name: idAnoNiliSN_F5_01 # Organism name: Anopheles nili (mosquitos) # Taxid: 185578 # BioSample: SAMEA12928243 # BioProject: PRJEB53353 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2022-06-24 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CALSGA01 # Genome coverage: 48x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_943737925.1 # RefSeq assembly accession: GCF_943737925.1 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_943737935.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_943737924.1 GCF_943737924.1 Primary Assembly ## GCA_943737926.1 GCF_943737926.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 2RL assembled-molecule 2 Chromosome OX031310.1 = NC_071291.1 Primary Assembly 78106464 na 3RL assembled-molecule 3 Chromosome OX031311.1 = NC_071292.1 Primary Assembly 75938266 na X assembled-molecule X Chromosome OX031312.1 = NC_071293.1 Primary Assembly 15967621 na X_unloc_1 unlocalized-scaffold X Chromosome CALSGA010000001.1 = NW_026525467.1 Primary Assembly 1531555 na X_unloc_2 unlocalized-scaffold X Chromosome CALSGA010000002.1 = NW_026525478.1 Primary Assembly 1265936 na X_unloc_3 unlocalized-scaffold X Chromosome CALSGA010000003.1 = NW_026525489.1 Primary Assembly 1158647 na X_unloc_4 unlocalized-scaffold X Chromosome CALSGA010000004.1 = NW_026525500.1 Primary Assembly 902493 na X_unloc_5 unlocalized-scaffold X Chromosome CALSGA010000005.1 = NW_026525511.1 Primary Assembly 732961 na X_unloc_6 unlocalized-scaffold X Chromosome CALSGA010000006.1 = NW_026525516.1 Primary Assembly 662812 na X_unloc_7 unlocalized-scaffold X Chromosome CALSGA010000007.1 = NW_026525517.1 Primary Assembly 601328 na X_unloc_8 unlocalized-scaffold X Chromosome CALSGA010000008.1 = NW_026525518.1 Primary Assembly 280644 na X_unloc_9 unlocalized-scaffold X Chromosome CALSGA010000009.1 = NW_026525519.1 Primary Assembly 242258 na X_unloc_10 unlocalized-scaffold X Chromosome CALSGA010000010.1 = NW_026525468.1 Primary Assembly 233277 na X_unloc_11 unlocalized-scaffold X Chromosome CALSGA010000011.1 = NW_026525469.1 Primary Assembly 218801 na X_unloc_12 unlocalized-scaffold X Chromosome CALSGA010000012.1 = NW_026525470.1 Primary Assembly 204682 na X_unloc_13 unlocalized-scaffold X Chromosome CALSGA010000013.1 = NW_026525471.1 Primary Assembly 204621 na X_unloc_14 unlocalized-scaffold X Chromosome CALSGA010000014.1 = NW_026525472.1 Primary Assembly 198230 na X_unloc_15 unlocalized-scaffold X Chromosome CALSGA010000015.1 = NW_026525473.1 Primary Assembly 195263 na X_unloc_16 unlocalized-scaffold X Chromosome CALSGA010000016.1 = NW_026525474.1 Primary Assembly 172140 na X_unloc_17 unlocalized-scaffold X Chromosome CALSGA010000017.1 = NW_026525475.1 Primary Assembly 170809 na X_unloc_18 unlocalized-scaffold X Chromosome CALSGA010000018.1 = NW_026525476.1 Primary Assembly 135055 na X_unloc_19 unlocalized-scaffold X Chromosome CALSGA010000019.1 = NW_026525477.1 Primary Assembly 134759 na X_unloc_20 unlocalized-scaffold X Chromosome CALSGA010000020.1 = NW_026525479.1 Primary Assembly 131764 na X_unloc_21 unlocalized-scaffold X Chromosome CALSGA010000021.1 = NW_026525480.1 Primary Assembly 122316 na X_unloc_22 unlocalized-scaffold X Chromosome CALSGA010000022.1 = NW_026525481.1 Primary Assembly 120925 na X_unloc_23 unlocalized-scaffold X Chromosome CALSGA010000023.1 = NW_026525482.1 Primary Assembly 119651 na X_unloc_24 unlocalized-scaffold X Chromosome CALSGA010000024.1 = NW_026525483.1 Primary Assembly 115931 na X_unloc_25 unlocalized-scaffold X Chromosome CALSGA010000025.1 = NW_026525484.1 Primary Assembly 112726 na X_unloc_26 unlocalized-scaffold X Chromosome CALSGA010000026.1 = NW_026525485.1 Primary Assembly 108297 na X_unloc_27 unlocalized-scaffold X Chromosome CALSGA010000027.1 = NW_026525486.1 Primary Assembly 88631 na X_unloc_28 unlocalized-scaffold X Chromosome CALSGA010000028.1 = NW_026525487.1 Primary Assembly 81338 na X_unloc_29 unlocalized-scaffold X Chromosome CALSGA010000029.1 = NW_026525488.1 Primary Assembly 80804 na X_unloc_30 unlocalized-scaffold X Chromosome CALSGA010000030.1 = NW_026525490.1 Primary Assembly 70477 na X_unloc_31 unlocalized-scaffold X Chromosome CALSGA010000031.1 = NW_026525491.1 Primary Assembly 64640 na X_unloc_32 unlocalized-scaffold X Chromosome CALSGA010000032.1 = NW_026525492.1 Primary Assembly 54894 na X_unloc_33 unlocalized-scaffold X Chromosome CALSGA010000033.1 = NW_026525493.1 Primary Assembly 54722 na X_unloc_34 unlocalized-scaffold X Chromosome CALSGA010000034.1 = NW_026525494.1 Primary Assembly 52911 na X_unloc_35 unlocalized-scaffold X Chromosome CALSGA010000035.1 = NW_026525495.1 Primary Assembly 51392 na X_unloc_36 unlocalized-scaffold X Chromosome CALSGA010000036.1 = NW_026525496.1 Primary Assembly 47262 na X_unloc_37 unlocalized-scaffold X Chromosome CALSGA010000037.1 = NW_026525497.1 Primary Assembly 39456 na X_unloc_38 unlocalized-scaffold X Chromosome CALSGA010000038.1 = NW_026525498.1 Primary Assembly 31483 na X_unloc_39 unlocalized-scaffold X Chromosome CALSGA010000039.1 = NW_026525499.1 Primary Assembly 29398 na X_unloc_40 unlocalized-scaffold X Chromosome CALSGA010000040.1 = NW_026525501.1 Primary Assembly 28281 na X_unloc_41 unlocalized-scaffold X Chromosome CALSGA010000041.1 = NW_026525502.1 Primary Assembly 27760 na X_unloc_42 unlocalized-scaffold X Chromosome CALSGA010000042.1 = NW_026525503.1 Primary Assembly 25923 na X_unloc_43 unlocalized-scaffold X Chromosome CALSGA010000043.1 = NW_026525504.1 Primary Assembly 25158 na X_unloc_44 unlocalized-scaffold X Chromosome CALSGA010000044.1 = NW_026525505.1 Primary Assembly 25058 na X_unloc_45 unlocalized-scaffold X Chromosome CALSGA010000045.1 = NW_026525506.1 Primary Assembly 24747 na X_unloc_46 unlocalized-scaffold X Chromosome CALSGA010000046.1 = NW_026525507.1 Primary Assembly 23844 na X_unloc_47 unlocalized-scaffold X Chromosome CALSGA010000047.1 = NW_026525508.1 Primary Assembly 21491 na X_unloc_48 unlocalized-scaffold X Chromosome CALSGA010000048.1 = NW_026525509.1 Primary Assembly 21033 na X_unloc_49 unlocalized-scaffold X Chromosome CALSGA010000049.1 = NW_026525510.1 Primary Assembly 20651 na X_unloc_50 unlocalized-scaffold X Chromosome CALSGA010000050.1 = NW_026525512.1 Primary Assembly 17348 na X_unloc_51 unlocalized-scaffold X Chromosome CALSGA010000051.1 = NW_026525513.1 Primary Assembly 16713 na X_unloc_52 unlocalized-scaffold X Chromosome CALSGA010000052.1 = NW_026525514.1 Primary Assembly 9798 na X_unloc_53 unlocalized-scaffold X Chromosome CALSGA010000053.1 = NW_026525515.1 Primary Assembly 9315 na scaffold_28 unplaced-scaffold na na CALSGA010000054.1 = NW_026525520.1 Primary Assembly 320162 na scaffold_60 unplaced-scaffold na na CALSGA010000055.1 = NW_026525521.1 Primary Assembly 145011 na scaffold_98 unplaced-scaffold na na CALSGA010000056.1 = NW_026525522.1 Primary Assembly 82044 na scaffold_119 unplaced-scaffold na na CALSGA010000057.1 = NW_026525523.1 Primary Assembly 55999 na scaffold_145 unplaced-scaffold na na CALSGA010000058.1 = NW_026525524.1 Primary Assembly 36394 na scaffold_159 unplaced-scaffold na na CALSGA010000059.1 = NW_026525525.1 Primary Assembly 30700 na scaffold_126 unplaced-scaffold na na CALSGA010000060.1 = NW_026525526.1 Primary Assembly 51261 na scaffold_5 unplaced-scaffold na na CALSGA010000061.1 = NW_026525527.1 Primary Assembly 1505435 na scaffold_11 unplaced-scaffold na na CALSGA010000062.1 = NW_026525528.1 Primary Assembly 848425 na scaffold_21 unplaced-scaffold na na CALSGA010000063.1 = NW_026525529.1 Primary Assembly 465958 na scaffold_208 unplaced-scaffold na na CALSGA010000064.1 = NW_026525530.1 Primary Assembly 8944 na scaffold_130 unplaced-scaffold na na CALSGA010000065.1 = NW_026525531.1 Primary Assembly 48934 na scaffold_140 unplaced-scaffold na na CALSGA010000066.1 = NW_026525532.1 Primary Assembly 40658 na scaffold_176 unplaced-scaffold na na CALSGA010000067.1 = NW_026525533.1 Primary Assembly 24575 na scaffold_177 unplaced-scaffold na na CALSGA010000068.1 = NW_026525534.1 Primary Assembly 24324 na scaffold_178 unplaced-scaffold na na CALSGA010000069.1 = NW_026525535.1 Primary Assembly 24210 na scaffold_195 unplaced-scaffold na na CALSGA010000070.1 = NW_026525536.1 Primary Assembly 17157 na scaffold_198 unplaced-scaffold na na CALSGA010000071.1 = NW_026525537.1 Primary Assembly 15663 na scaffold_210 unplaced-scaffold na na CALSGA010000072.1 = NW_026525538.1 Primary Assembly 7138 na U_low_cov_1 unplaced-scaffold na na CALSGA010000073.1 = NW_026525539.1 Primary Assembly 1451339 na U_low_cov_2 unplaced-scaffold na na CALSGA010000074.1 = NW_026525540.1 Primary Assembly 730764 na U_low_cov_3 unplaced-scaffold na na CALSGA010000075.1 = NW_026525541.1 Primary Assembly 478738 na U_low_cov_4 unplaced-scaffold na na CALSGA010000076.1 = NW_026525542.1 Primary Assembly 449445 na U_low_cov_5 unplaced-scaffold na na CALSGA010000077.1 = NW_026525543.1 Primary Assembly 362011 na U_low_cov_6 unplaced-scaffold na na CALSGA010000078.1 = NW_026525544.1 Primary Assembly 309202 na U_low_cov_7 unplaced-scaffold na na CALSGA010000079.1 = NW_026525545.1 Primary Assembly 299075 na U_low_cov_8 unplaced-scaffold na na CALSGA010000080.1 = NW_026525546.1 Primary Assembly 295245 na U_low_cov_9 unplaced-scaffold na na CALSGA010000081.1 = NW_026525547.1 Primary Assembly 291767 na U_low_cov_10 unplaced-scaffold na na CALSGA010000082.1 = NW_026525548.1 Primary Assembly 288334 na U_low_cov_11 unplaced-scaffold na na CALSGA010000083.1 = NW_026525549.1 Primary Assembly 241391 na U_low_cov_12 unplaced-scaffold na na CALSGA010000084.1 = NW_026525550.1 Primary Assembly 194636 na U_low_cov_13 unplaced-scaffold na na CALSGA010000085.1 = NW_026525551.1 Primary Assembly 192923 na U_low_cov_14 unplaced-scaffold na na CALSGA010000086.1 = NW_026525552.1 Primary Assembly 176536 na U_low_cov_15 unplaced-scaffold na na CALSGA010000087.1 = NW_026525553.1 Primary Assembly 172766 na U_low_cov_16 unplaced-scaffold na na CALSGA010000088.1 = NW_026525554.1 Primary Assembly 163587 na U_low_cov_17 unplaced-scaffold na na CALSGA010000089.1 = NW_026525555.1 Primary Assembly 157439 na U_low_cov_18 unplaced-scaffold na na CALSGA010000090.1 = NW_026525556.1 Primary Assembly 157149 na U_low_cov_19 unplaced-scaffold na na CALSGA010000091.1 = NW_026525557.1 Primary Assembly 155905 na U_low_cov_20 unplaced-scaffold na na CALSGA010000092.1 = NW_026525558.1 Primary Assembly 154389 na U_low_cov_21 unplaced-scaffold na na CALSGA010000093.1 = NW_026525559.1 Primary Assembly 146381 na U_low_cov_22 unplaced-scaffold na na CALSGA010000094.1 = NW_026525560.1 Primary Assembly 141689 na U_low_cov_23 unplaced-scaffold na na CALSGA010000095.1 = NW_026525561.1 Primary Assembly 141493 na U_low_cov_24 unplaced-scaffold na na CALSGA010000096.1 = NW_026525562.1 Primary Assembly 135717 na U_low_cov_25 unplaced-scaffold na na CALSGA010000097.1 = NW_026525563.1 Primary Assembly 109673 na U_low_cov_26 unplaced-scaffold na na CALSGA010000098.1 = NW_026525564.1 Primary Assembly 108141 na U_low_cov_27 unplaced-scaffold na na CALSGA010000099.1 = NW_026525565.1 Primary Assembly 104349 na U_low_cov_28 unplaced-scaffold na na CALSGA010000100.1 = NW_026525566.1 Primary Assembly 101124 na U_low_cov_29 unplaced-scaffold na na CALSGA010000101.1 = NW_026525567.1 Primary Assembly 98952 na U_low_cov_30 unplaced-scaffold na na CALSGA010000102.1 = NW_026525568.1 Primary Assembly 98055 na U_low_cov_31 unplaced-scaffold na na CALSGA010000103.1 = NW_026525569.1 Primary Assembly 97220 na U_low_cov_32 unplaced-scaffold na na CALSGA010000104.1 = NW_026525570.1 Primary Assembly 96258 na U_low_cov_33 unplaced-scaffold na na CALSGA010000105.1 = NW_026525571.1 Primary Assembly 95103 na U_low_cov_34 unplaced-scaffold na na CALSGA010000106.1 = NW_026525572.1 Primary Assembly 93846 na U_low_cov_35 unplaced-scaffold na na CALSGA010000107.1 = NW_026525573.1 Primary Assembly 91290 na U_low_cov_36 unplaced-scaffold na na CALSGA010000108.1 = NW_026525574.1 Primary Assembly 87433 na U_low_cov_37 unplaced-scaffold na na CALSGA010000109.1 = NW_026525575.1 Primary Assembly 87334 na U_low_cov_38 unplaced-scaffold na na CALSGA010000110.1 = NW_026525576.1 Primary Assembly 83873 na U_low_cov_39 unplaced-scaffold na na CALSGA010000111.1 = NW_026525577.1 Primary Assembly 83623 na U_low_cov_40 unplaced-scaffold na na CALSGA010000112.1 = NW_026525578.1 Primary Assembly 83409 na U_low_cov_41 unplaced-scaffold na na CALSGA010000113.1 = NW_026525579.1 Primary Assembly 82086 na U_low_cov_42 unplaced-scaffold na na CALSGA010000114.1 = NW_026525580.1 Primary Assembly 78481 na U_low_cov_43 unplaced-scaffold na na CALSGA010000115.1 = NW_026525581.1 Primary Assembly 73746 na U_low_cov_44 unplaced-scaffold na na CALSGA010000116.1 = NW_026525582.1 Primary Assembly 71709 na U_low_cov_45 unplaced-scaffold na na CALSGA010000117.1 = NW_026525583.1 Primary Assembly 70924 na U_low_cov_46 unplaced-scaffold na na CALSGA010000118.1 = NW_026525584.1 Primary Assembly 60890 na U_low_cov_47 unplaced-scaffold na na CALSGA010000119.1 = NW_026525585.1 Primary Assembly 59019 na U_low_cov_48 unplaced-scaffold na na CALSGA010000120.1 = NW_026525586.1 Primary Assembly 54954 na U_low_cov_49 unplaced-scaffold na na CALSGA010000121.1 = NW_026525587.1 Primary Assembly 53682 na U_low_cov_50 unplaced-scaffold na na CALSGA010000122.1 = NW_026525588.1 Primary Assembly 48654 na U_low_cov_51 unplaced-scaffold na na CALSGA010000123.1 = NW_026525589.1 Primary Assembly 47771 na U_low_cov_52 unplaced-scaffold na na CALSGA010000124.1 = NW_026525590.1 Primary Assembly 47547 na U_low_cov_53 unplaced-scaffold na na CALSGA010000125.1 = NW_026525591.1 Primary Assembly 42064 na U_low_cov_54 unplaced-scaffold na na CALSGA010000126.1 = NW_026525592.1 Primary Assembly 41708 na U_low_cov_55 unplaced-scaffold na na CALSGA010000127.1 = NW_026525593.1 Primary Assembly 41697 na U_low_cov_56 unplaced-scaffold na na CALSGA010000128.1 = NW_026525594.1 Primary Assembly 40698 na U_low_cov_57 unplaced-scaffold na na CALSGA010000129.1 = NW_026525595.1 Primary Assembly 37431 na U_low_cov_58 unplaced-scaffold na na CALSGA010000130.1 = NW_026525596.1 Primary Assembly 35634 na U_low_cov_59 unplaced-scaffold na na CALSGA010000131.1 = NW_026525597.1 Primary Assembly 34429 na U_low_cov_60 unplaced-scaffold na na CALSGA010000132.1 = NW_026525598.1 Primary Assembly 34044 na U_low_cov_61 unplaced-scaffold na na CALSGA010000133.1 = NW_026525599.1 Primary Assembly 33254 na U_low_cov_62 unplaced-scaffold na na CALSGA010000134.1 = NW_026525600.1 Primary Assembly 33051 na U_low_cov_63 unplaced-scaffold na na CALSGA010000135.1 = NW_026525601.1 Primary Assembly 32948 na U_low_cov_64 unplaced-scaffold na na CALSGA010000136.1 = NW_026525602.1 Primary Assembly 31356 na U_low_cov_65 unplaced-scaffold na na CALSGA010000137.1 = NW_026525603.1 Primary Assembly 30605 na U_low_cov_66 unplaced-scaffold na na CALSGA010000138.1 = NW_026525604.1 Primary Assembly 28864 na U_low_cov_67 unplaced-scaffold na na CALSGA010000139.1 = NW_026525605.1 Primary Assembly 28251 na U_low_cov_68 unplaced-scaffold na na CALSGA010000140.1 = NW_026525606.1 Primary Assembly 27947 na U_low_cov_69 unplaced-scaffold na na CALSGA010000141.1 = NW_026525607.1 Primary Assembly 27772 na U_low_cov_70 unplaced-scaffold na na CALSGA010000142.1 = NW_026525608.1 Primary Assembly 26431 na U_low_cov_71 unplaced-scaffold na na CALSGA010000143.1 = NW_026525609.1 Primary Assembly 22603 na U_low_cov_72 unplaced-scaffold na na CALSGA010000144.1 = NW_026525610.1 Primary Assembly 20088 na U_low_cov_73 unplaced-scaffold na na CALSGA010000145.1 = NW_026525611.1 Primary Assembly 20016 na U_low_cov_74 unplaced-scaffold na na CALSGA010000146.1 = NW_026525612.1 Primary Assembly 19439 na U_low_cov_75 unplaced-scaffold na na CALSGA010000147.1 = NW_026525613.1 Primary Assembly 17856 na U_low_cov_76 unplaced-scaffold na na CALSGA010000148.1 = NW_026525614.1 Primary Assembly 14258 na U_low_cov_77 unplaced-scaffold na na CALSGA010000149.1 = NW_026525615.1 Primary Assembly 13415 na U_low_cov_78 unplaced-scaffold na na CALSGA010000150.1 = NW_026525616.1 Primary Assembly 11740 na U_low_cov_79 unplaced-scaffold na na CALSGA010000151.1 = NW_026525617.1 Primary Assembly 11016 na U_low_cov_80 unplaced-scaffold na na CALSGA010000152.1 = NW_026525618.1 Primary Assembly 9231 na U_low_cov_81 unplaced-scaffold na na CALSGA010000153.1 = NW_026525619.1 Primary Assembly 8036 na scaffold_MT assembled-molecule MT Mitochondrion OX031313.1 = NC_064610.1 non-nuclear 15347 na