# Assembly name:  jaPocDami1.2
# Organism name:  Pocillopora damicornis (cauliflower coral)
# Taxid:          46731
# BioSample:      SAMEA115388654
# BioProject:     PRJEB77925
# Submitter:      WELLCOME SANGER INSTITUTE
# Date:           2026-09-09
# Assembly type:  haploid (principal pseudohaplotype of diploid)
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    CAXNCK02
# Assembly method: various
# Genome coverage: 203x
# Sequencing technology: PacBio,Arima2
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_964200805.2
# RefSeq assembly accession: GCF_964200805.1
# RefSeq assembly and GenBank assemblies identical: no
# Linked assembly: GCA_964200845.2 (alternate pseudohaplotype of diploid)
#
## Assembly-Unit names:
## Primary Assembly
## non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	OZ123161.1	=	NC_142670.1	Primary Assembly	41075638	na
SUPER_2	assembled-molecule	2	Chromosome	OZ123162.1	=	NC_142671.1	Primary Assembly	37914753	na
SUPER_3	assembled-molecule	3	Chromosome	OZ123163.1	=	NC_142672.1	Primary Assembly	32406301	na
SUPER_4	assembled-molecule	4	Chromosome	OZ123164.1	=	NC_142673.1	Primary Assembly	31015512	na
SUPER_5	assembled-molecule	5	Chromosome	OZ123165.1	=	NC_142674.1	Primary Assembly	28867666	na
SUPER_6	assembled-molecule	6	Chromosome	OZ123166.1	=	NC_142675.1	Primary Assembly	25611475	na
SUPER_7	assembled-molecule	7	Chromosome	OZ123167.1	=	NC_142676.1	Primary Assembly	25599548	na
SUPER_8	assembled-molecule	8	Chromosome	OZ123168.1	=	NC_142677.1	Primary Assembly	24362985	na
SUPER_9	assembled-molecule	9	Chromosome	OZ123169.1	=	NC_142678.1	Primary Assembly	23700713	na
SUPER_10	assembled-molecule	10	Chromosome	OZ123170.1	=	NC_142679.1	Primary Assembly	23565400	na
SUPER_11	assembled-molecule	11	Chromosome	OZ123171.1	=	NC_142680.1	Primary Assembly	23453960	na
SUPER_12	assembled-molecule	12	Chromosome	OZ123172.1	=	NC_142681.1	Primary Assembly	21362752	na
SUPER_13	assembled-molecule	13	Chromosome	OZ123173.1	=	NC_142682.1	Primary Assembly	21266790	na
SUPER_14	assembled-molecule	14	Chromosome	OZ123174.1	=	NC_142683.1	Primary Assembly	19711087	na
SCAFFOLD_5001	unplaced-scaffold	na	na	CAXNCK020000001.1	=	NW_028292479.1	Primary Assembly	1000	na
SCAFFOLD_2922	unplaced-scaffold	na	na	CAXNCK020000002.1	=	NW_028292480.1	Primary Assembly	21722	na
SCAFFOLD_5093	unplaced-scaffold	na	na	CAXNCK020000003.1	=	NW_028292481.1	Primary Assembly	1000	na
SCAFFOLD_4649	unplaced-scaffold	na	na	CAXNCK020000004.1	=	NW_028292482.1	Primary Assembly	2000	na
SCAFFOLD_5056	unplaced-scaffold	na	na	CAXNCK020000005.1	=	NW_028292483.1	Primary Assembly	1000	na
SCAFFOLD_2400	unplaced-scaffold	na	na	CAXNCK020000006.1	=	NW_028292484.1	Primary Assembly	28759	na
SCAFFOLD_4113	unplaced-scaffold	na	na	CAXNCK020000007.1	=	NW_028292485.1	Primary Assembly	5439	na
SCAFFOLD_1841	unplaced-scaffold	na	na	CAXNCK020000008.1	=	NW_028292486.1	Primary Assembly	35000	na
SCAFFOLD_5072	unplaced-scaffold	na	na	CAXNCK020000009.1	=	NW_028292487.1	Primary Assembly	1000	na
SCAFFOLD_4158	unplaced-scaffold	na	na	CAXNCK020000010.1	=	NW_028292488.1	Primary Assembly	5000	na
SCAFFOLD_4998	unplaced-scaffold	na	na	CAXNCK020000011.1	=	NW_028292489.1	Primary Assembly	1000	na
SCAFFOLD_4225	unplaced-scaffold	na	na	CAXNCK020000012.1	=	NW_028292490.1	Primary Assembly	4000	na
SCAFFOLD_4034	unplaced-scaffold	na	na	CAXNCK020000013.1	=	NW_028292491.1	Primary Assembly	6235	na
SCAFFOLD_4563	unplaced-scaffold	na	na	CAXNCK020000014.1	=	NW_028292492.1	Primary Assembly	2000	na
SCAFFOLD_3778	unplaced-scaffold	na	na	CAXNCK020000015.1	=	NW_028292493.1	Primary Assembly	11380	na
SCAFFOLD_1885	unplaced-scaffold	na	na	CAXNCK020000016.1	=	NW_028292494.1	Primary Assembly	34494	na
SCAFFOLD_4194	unplaced-scaffold	na	na	CAXNCK020000017.1	=	NW_028292495.1	Primary Assembly	4938	na
SCAFFOLD_3766	unplaced-scaffold	na	na	CAXNCK020000018.1	=	NW_028292496.1	Primary Assembly	11697	na
SCAFFOLD_4954	unplaced-scaffold	na	na	CAXNCK020000019.1	=	NW_028292497.1	Primary Assembly	1000	na
SCAFFOLD_5046	unplaced-scaffold	na	na	CAXNCK020000020.1	=	NW_028292498.1	Primary Assembly	1000	na
SCAFFOLD_4848	unplaced-scaffold	na	na	CAXNCK020000021.1	=	NW_028292499.1	Primary Assembly	1000	na
SCAFFOLD_4387	unplaced-scaffold	na	na	CAXNCK020000022.1	=	NW_028292500.1	Primary Assembly	3000	na
SCAFFOLD_4804	unplaced-scaffold	na	na	CAXNCK020000023.1	=	NW_028292501.1	Primary Assembly	1000	na
SCAFFOLD_4972	unplaced-scaffold	na	na	CAXNCK020000024.1	=	NW_028292502.1	Primary Assembly	1000	na
SCAFFOLD_5065	unplaced-scaffold	na	na	CAXNCK020000025.1	=	NW_028292503.1	Primary Assembly	1000	na
SCAFFOLD_4432	unplaced-scaffold	na	na	CAXNCK020000026.1	=	NW_028292504.1	Primary Assembly	3000	na
SCAFFOLD_4762	unplaced-scaffold	na	na	CAXNCK020000027.1	=	NW_028292505.1	Primary Assembly	1000	na
SCAFFOLD_4915	unplaced-scaffold	na	na	CAXNCK020000028.1	=	NW_028292506.1	Primary Assembly	1000	na
SCAFFOLD_4199	unplaced-scaffold	na	na	CAXNCK020000029.1	=	NW_028292507.1	Primary Assembly	4119	na
SCAFFOLD_4850	unplaced-scaffold	na	na	CAXNCK020000030.1	=	NW_028292508.1	Primary Assembly	1000	na
SCAFFOLD_4786	unplaced-scaffold	na	na	CAXNCK020000031.1	=	NW_028292509.1	Primary Assembly	1000	na
SCAFFOLD_4587	unplaced-scaffold	na	na	CAXNCK020000032.1	=	NW_028292510.1	Primary Assembly	2000	na
SCAFFOLD_3880	unplaced-scaffold	na	na	CAXNCK020000033.1	=	NW_028292511.1	Primary Assembly	9636	na
SCAFFOLD_3559	unplaced-scaffold	na	na	CAXNCK020000034.1	=	NW_028292512.1	Primary Assembly	14143	na
SCAFFOLD_4812	unplaced-scaffold	na	na	CAXNCK020000035.1	=	NW_028292513.1	Primary Assembly	1000	na
SCAFFOLD_3846	unplaced-scaffold	na	na	CAXNCK020000036.1	=	NW_028292514.1	Primary Assembly	10762	na
SCAFFOLD_3962	unplaced-scaffold	na	na	CAXNCK020000037.1	=	NW_028292515.1	Primary Assembly	8000	na
SCAFFOLD_4197	unplaced-scaffold	na	na	CAXNCK020000038.1	=	NW_028292516.1	Primary Assembly	4577	na
SCAFFOLD_3883	unplaced-scaffold	na	na	CAXNCK020000039.1	=	NW_028292517.1	Primary Assembly	9472	na
SCAFFOLD_3926	unplaced-scaffold	na	na	CAXNCK020000040.1	=	NW_028292518.1	Primary Assembly	8569	na
SCAFFOLD_2283	unplaced-scaffold	na	na	CAXNCK020000041.1	=	NW_028292519.1	Primary Assembly	30060	na
SCAFFOLD_4823	unplaced-scaffold	na	na	CAXNCK020000042.1	=	NW_028292520.1	Primary Assembly	1000	na
SCAFFOLD_4984	unplaced-scaffold	na	na	CAXNCK020000043.1	=	NW_028292521.1	Primary Assembly	1000	na
SCAFFOLD_4108	unplaced-scaffold	na	na	CAXNCK020000044.1	=	NW_028292522.1	Primary Assembly	5682	na
SCAFFOLD_4855	unplaced-scaffold	na	na	CAXNCK020000045.1	=	NW_028292523.1	Primary Assembly	1000	na
SCAFFOLD_4695	unplaced-scaffold	na	na	CAXNCK020000046.1	=	NW_028292524.1	Primary Assembly	2000	na
SCAFFOLD_2392	unplaced-scaffold	na	na	CAXNCK020000047.1	=	NW_028292525.1	Primary Assembly	28843	na
SCAFFOLD_4745	unplaced-scaffold	na	na	CAXNCK020000048.1	=	NW_028292526.1	Primary Assembly	1000	na
SCAFFOLD_4501	unplaced-scaffold	na	na	CAXNCK020000049.1	=	NW_028292527.1	Primary Assembly	2000	na
SCAFFOLD_3982	unplaced-scaffold	na	na	CAXNCK020000050.1	=	NW_028292528.1	Primary Assembly	7216	na
SCAFFOLD_3932	unplaced-scaffold	na	na	CAXNCK020000051.1	=	NW_028292529.1	Primary Assembly	8143	na
SCAFFOLD_4940	unplaced-scaffold	na	na	CAXNCK020000052.1	=	NW_028292530.1	Primary Assembly	1000	na
SCAFFOLD_4356	unplaced-scaffold	na	na	CAXNCK020000053.1	=	NW_028292531.1	Primary Assembly	3000	na
SCAFFOLD_4892	unplaced-scaffold	na	na	CAXNCK020000054.1	=	NW_028292532.1	Primary Assembly	1000	na
SCAFFOLD_4201	unplaced-scaffold	na	na	CAXNCK020000055.1	=	NW_028292533.1	Primary Assembly	4000	na
SCAFFOLD_3978	unplaced-scaffold	na	na	CAXNCK020000056.1	=	NW_028292534.1	Primary Assembly	7804	na
SCAFFOLD_3850	unplaced-scaffold	na	na	CAXNCK020000057.1	=	NW_028292535.1	Primary Assembly	10442	na
SCAFFOLD_4643	unplaced-scaffold	na	na	CAXNCK020000058.1	=	NW_028292536.1	Primary Assembly	2000	na
SCAFFOLD_4354	unplaced-scaffold	na	na	CAXNCK020000059.1	=	NW_028292537.1	Primary Assembly	3000	na
SCAFFOLD_4732	unplaced-scaffold	na	na	CAXNCK020000060.1	=	NW_028292538.1	Primary Assembly	1000	na
SCAFFOLD_4267	unplaced-scaffold	na	na	CAXNCK020000061.1	=	NW_028292539.1	Primary Assembly	4000	na
SCAFFOLD_5097	unplaced-scaffold	na	na	CAXNCK020000062.1	=	NW_028292540.1	Primary Assembly	1000	na
SCAFFOLD_4578	unplaced-scaffold	na	na	CAXNCK020000063.1	=	NW_028292541.1	Primary Assembly	2000	na
SCAFFOLD_4123	unplaced-scaffold	na	na	CAXNCK020000064.1	=	NW_028292542.1	Primary Assembly	5000	na
SCAFFOLD_5085	unplaced-scaffold	na	na	CAXNCK020000065.1	=	NW_028292543.1	Primary Assembly	1000	na
SCAFFOLD_9_1	unplaced-scaffold	na	na	CAXNCK020000066.1	=	NW_028292544.1	Primary Assembly	7264	na
SCAFFOLD_3632	unplaced-scaffold	na	na	CAXNCK020000067.1	=	NW_028292545.1	Primary Assembly	13373	na
SCAFFOLD_1732	unplaced-scaffold	na	na	CAXNCK020000068.1	=	NW_028292546.1	Primary Assembly	36284	na
SCAFFOLD_4926	unplaced-scaffold	na	na	CAXNCK020000069.1	=	NW_028292547.1	Primary Assembly	1000	na
SCAFFOLD_3507	unplaced-scaffold	na	na	CAXNCK020000070.1	=	NW_028292548.1	Primary Assembly	15000	na
SCAFFOLD_4953	unplaced-scaffold	na	na	CAXNCK020000071.1	=	NW_028292549.1	Primary Assembly	1000	na
SCAFFOLD_4961	unplaced-scaffold	na	na	CAXNCK020000072.1	=	NW_028292550.1	Primary Assembly	1000	na
SCAFFOLD_1516	unplaced-scaffold	na	na	CAXNCK020000073.1	=	NW_028292551.1	Primary Assembly	39183	na
SCAFFOLD_4838	unplaced-scaffold	na	na	CAXNCK020000074.1	=	NW_028292552.1	Primary Assembly	1000	na
SCAFFOLD_4323	unplaced-scaffold	na	na	CAXNCK020000075.1	=	NW_028292553.1	Primary Assembly	3784	na
SCAFFOLD_4219	unplaced-scaffold	na	na	CAXNCK020000076.1	=	NW_028292554.1	Primary Assembly	4000	na
SCAFFOLD_3980	unplaced-scaffold	na	na	CAXNCK020000077.1	=	NW_028292555.1	Primary Assembly	7541	na
SCAFFOLD_3775	unplaced-scaffold	na	na	CAXNCK020000078.1	=	NW_028292556.1	Primary Assembly	11461	na
SCAFFOLD_4618	unplaced-scaffold	na	na	CAXNCK020000079.1	=	NW_028292557.1	Primary Assembly	2000	na
SCAFFOLD_4064	unplaced-scaffold	na	na	CAXNCK020000080.1	=	NW_028292558.1	Primary Assembly	6000	na
SCAFFOLD_4697	unplaced-scaffold	na	na	CAXNCK020000081.1	=	NW_028292559.1	Primary Assembly	2000	na
SCAFFOLD_4223	unplaced-scaffold	na	na	CAXNCK020000082.1	=	NW_028292560.1	Primary Assembly	4000	na
SCAFFOLD_4904	unplaced-scaffold	na	na	CAXNCK020000083.1	=	NW_028292561.1	Primary Assembly	1000	na
SCAFFOLD_4028	unplaced-scaffold	na	na	CAXNCK020000084.1	=	NW_028292562.1	Primary Assembly	6711	na
SCAFFOLD_3981	unplaced-scaffold	na	na	CAXNCK020000085.1	=	NW_028292563.1	Primary Assembly	7485	na
SCAFFOLD_5089	unplaced-scaffold	na	na	CAXNCK020000086.1	=	NW_028292564.1	Primary Assembly	1000	na
SCAFFOLD_2427	unplaced-scaffold	na	na	CAXNCK020000087.1	=	NW_028292565.1	Primary Assembly	28373	na
SCAFFOLD_5041	unplaced-scaffold	na	na	CAXNCK020000088.1	=	NW_028292566.1	Primary Assembly	1000	na
SCAFFOLD_3876	unplaced-scaffold	na	na	CAXNCK020000089.1	=	NW_028292567.1	Primary Assembly	9985	na
SCAFFOLD_1100	unplaced-scaffold	na	na	CAXNCK020000090.1	=	NW_028292568.1	Primary Assembly	38880	na
scaffold_MT_1	assembled-molecule	MT	Mitochondrion	OZ123175.1	<>	na	non-nuclear	17317	na