Description

This track shows the alignment of a random subset of 500 individual genomic instances (hg38) of this repeat type to the consensus. Only 500 instances are shown as this track tends to crash the browser otherwise.

Methods

As part of the buildLiftOver step, psl files for each consensus and all it's individual instances are generated. 500 of these elements were randomly taken from each file using the bash shuf command and combined into a bigPsl track.

Email:markd@ucsc.edu or max@soe.ucsc.edu