Description

This track shows a multiple alignment of 577 vertebrate genomes made with Cactus. This alignment represents the largest and most taxonomically diverse vertebrate alignment to date, spanning mammals, birds, fishes, reptiles, and amphibians from the Vertebrate Genomes Project (VGP) and related sequencing initiatives.

All alignments were performed using the Cactus toolkit, which uses a reference-free approach to construct genome alignments and ancestral reconstructions. Unlike traditional progressive alignment methods, Cactus simultaneously considers all input genomes to minimize reference bias and improve alignment accuracy across diverse evolutionary distances.

The alignment includes:

This broad phylogenetic sampling enables comparative genomics studies across the vertebrate tree of life, supporting research in evolution, conservation, and functional genomics.

Data Access

Downloads for data in this track are available from the directories:

Display Conventions and Configuration

Pairwise alignments of each species to the reference genome are displayed as a grayscale density plot (in pack mode) or as a wiggle (in full mode) that indicates alignment quality. In dense display mode, alignments are shown in grayscale using darker values to indicate higher levels of coverage.

Checkboxes on the track configuration page allow selection of the species to include in the pairwise display. Note that excluding species from the pairwise display does not alter the underlying alignment data.

To view detailed information about the alignments at a specific position, zoom the display in to 30,000 or fewer bases, then click on the alignment.

Gap Annotation

The Display chains between alignments configuration option enables display of gaps between alignment blocks in the pairwise alignments in a manner similar to the Chain track display. Missing sequence in any assembly is highlighted in the track display by regions of yellow when zoomed out and by Ns when displayed at base level. The following conventions are used:

Genomic Breaks

Discontinuities in the genomic context (chromosome, scaffold or region) of the aligned DNA in the aligning species are shown as follows:

Base Level

When zoomed-in to the base-level display, the track shows the base composition of each alignment. The numbers and symbols on the Gaps line indicate the lengths of gaps in the reference sequence at those alignment positions relative to the longest non-reference sequence. If there is sufficient space in the display, the size of the gap is shown. If the space is insufficient and the gap size is a multiple of 3, a "*" is displayed; other gap sizes are indicated by "+".

Methods

The VGP 577-way alignment was created using the Cactus multiple genome alignment tool. Cactus employs a reference-free progressive alignment strategy that constructs a series of pairwise alignments organized according to a guide tree, then uses these to build progressively larger alignments up to the full multiple alignment.

Unlike traditional progressive alignment approaches, Cactus performs an additional "bar" phase that identifies and resolves alignment conflicts by considering all genomes simultaneously. This helps reduce reference bias and improves accuracy across diverse evolutionary distances present in vertebrate genomes.

The input genomes represent high-quality chromosome-level assemblies primarily from the Vertebrate Genomes Project, with additional assemblies from NCBI RefSeq and GenBank that meet quality standards for whole-genome alignment.

Sequences (click on header labels to sort by that column)

Default order is by similarity to the reference

count accession
(link to browser)
common
name
scientific name VGP grouping
001GCA_901765095.2tiny cayenne caecilianMicrocaecilia unicolor
reference species
Amphibians
002GCF_902459505.1Gaboon caecilianGeotrypetes seraphiniAmphibians
003GCF_901001135.1two-lined caecilianRhinatrema bivittatumAmphibians
004GCA_040894355.2Bellinger river turtleMyuchelys georgesiReptiles
005GCA_965152275.1Australian flatback sea turtleNatator depressusReptiles
006GCF_015237465.2green sea turtleChelonia mydasReptiles
007GCF_028017835.1European pond turtleEmys orbicularisReptiles
008GCA_965140235.1loggerhead sea turtleCaretta carettaReptiles
009GCA_965140285.1Kemp's ridley sea turtleLepidochelys kempiiReptiles
010GCA_965140295.1Pacific ridleyLepidochelys olivaceaReptiles
011GCF_025201925.1Mexican gopher tortoiseGopherus flavomarginatusReptiles
012GCF_007399415.2Goode's Thornscrub TortoiseGopherus evgoodeiReptiles
013GCA_965152235.1Hawksbill sea turtleEretmochelys imbricataReptiles
014GCF_009764565.3leatherback sea turtleDermochelys coriaceaReptiles
015GCA_045781085.1Indian roofed turtlePangshura tectaReptiles
016GCA_045364815.1arrau turtlePodocnemis expansaReptiles
017GCA_033958435.1pig-nosed turtleCarettochelys insculptaReptiles
018GCA_030020295.1Indian gharialGavialis gangeticusReptiles
019GCF_030867095.1American alligatorAlligator mississippiensisReptiles
020GCA_032164245.1eastern musk turtleSternotherus odoratusReptiles
021GCA_040206685.1coastal tailed frogAscaphus trueiAmphibians
022GCA_033349115.1Suwannee snapping turtleMacrochelys suwanniensisReptiles
023GCF_040807025.1common ostrichStruthio camelus australisBirds Other
024GCF_036417845.1North Island brown kiwiApteryx mantelliBirds Other
025GCA_037962945.1king vultureSarcoramphus papaBirds Landbirds
026GCF_036370855.1emuDromaius novaehollandiaeBirds Other
027GCF_027887155.1diamondback terrapinMalaclemys terrapinReptiles
028GCA_028022735.1bearded vultureGypaetus barbatusBirds Landbirds
029GCF_900496995.4European golden eagleAquila chrysaetosBirds Landbirds
030GCA_964188355.1common buzzardButeo buteoBirds Landbirds
031GCF_026419915.1harpy eagleHarpia harpyjaBirds Landbirds
032GCA_045345515.1crested eagleMorphnus guianensisBirds Landbirds
033GCF_028389875.1lesser rhea Rhea pennataBirds Other
034GCF_929443795.1Northern goshawkAccipiter gentilisBirds Landbirds
035GCF_947461875.1white-tailed eagleHaliaeetus albicillaBirds Landbirds
036GCA_964195595.2Cory's shearwaterCalonectris borealisBirds Waterbirds
037GCF_028858705.1whooping craneGrus americanaBirds Waterbirds
038GCA_964106855.1Eurasian craneGrus grusBirds Waterbirds
039GCA_031877795.1tawny owlStrix alucoBirds Landbirds
040GCA_009819775.1American flamingoPhoenicopterus ruberBirds Other
041GCA_965140245.1little owlAthene noctuaBirds Landbirds
042GCF_030936135.1red-throated LoonGavia stellataBirds Waterbirds
043GCA_965183815.1Eurasian spoonbillPlatalea leucorodiaBirds Waterbirds
044GCA_017639555.1Maguari storkCiconia maguariBirds Waterbirds
045GCA_009819825.1red-legged seriemaCariama cristataBirds Landbirds
046GCA_011004875.1grey crowned-craneBalearica regulorum gibbericepsBirds Waterbirds
047GCA_027474245.1Humboldt penguinSpheniscus humboldtiBirds Waterbirds
048GCA_030463565.1dalmatian pelicanPelecanus crispusBirds Waterbirds
049GCA_020745775.1plumbeous ibisTheristicus caerulescensBirds Waterbirds
050GCA_031468815.1Northern gannetMorus bassanusBirds Waterbirds
051GCA_964199755.1yellow-legged gullLarus michahellisBirds Waterbirds
052GCA_963932225.1lesser black-backed gullLarus fuscusBirds Waterbirds
053GCF_963924245.1black-headed gullChroicocephalus ridibundusBirds Waterbirds
054GCA_964417175.1herring gullLarus argentatusBirds Waterbirds
055GCF_028500815.1black-legged kittiwakeRissa tridactylaBirds Waterbirds
056GCA_009819605.1common ternSterna hirundoBirds Waterbirds
057GCF_963921805.1great cormorantPhalacrocorax carboBirds Waterbirds
058GCA_965231255.1Northern LapwingVanellus vanellusBirds Waterbirds
059GCA_965151615.1tundra swanCygnus columbianusBirds Other
060GCF_013368605.1great potooNyctibius grandisBirds Other
061GCA_949628215.1European shagGulosus aristotelisBirds Waterbirds
062GCA_965231335.1Canada gooseBranta canadensisBirds Other
063GCA_034619465.1cuckoo-rollerLeptosomus discolorBirds Landbirds
064GCF_017639655.2lesser kestrelFalco naumanniBirds Landbirds
065GCA_964106895.1Eurasian curlewNumenius arquataBirds Waterbirds
066GCA_963210335.1Mauritius kestrelFalco punctatusBirds Landbirds
067GCF_023634155.1peregrine falconFalco peregrinusBirds Landbirds
068GCF_015220075.1gyrfalconFalco rusticolusBirds Landbirds
069GCA_008658365.1razorbillAlca TordaBirds Waterbirds
070GCF_023634085.1saker falconFalco cherrugBirds Landbirds
071GCF_040182565.1swan gooseAnser cygnoidesBirds Other
072GCA_964211835.1domestic gooseAnser anserBirds Other
073GCA_907165065.1Eurasian nightjarCaprimulgus europaeusBirds Other
074GCA_963989345.1long-tailed duckClangula hyemalisBirds Other
075GCA_964034855.1pink-footed gooseAnser brachyrhynchusBirds Other
076GCA_964211825.1common pochardAythya ferinaBirds Other
077GCA_964059595.1common goldeneyeBucephala clangulaBirds Other
078GCA_036417535.1MacQueen's bustardChlamydotis macqueeniiBirds Other
079GCA_964188345.1mallardAnas platyrhynchosBirds Other
080GCF_036013445.1Nicobar pigeonCaloenas nicobaricaBirds Other
081GCF_023638135.1Lanner falconFalco biarmicusBirds Landbirds
082GCA_030867145.1hoatzinOpisthocomus hoazinBirds Waterbirds
083GCF_009769625.2mute swanCygnus olorBirds Other
084GCA_964289735.1red-billed tropicbirdPhaethon aethereusBirds Waterbirds
085GCA_009769465.1red-crested turacoTauraco erythrolophusBirds Other
086GCA_964035555.1red-crested pochardNetta rufinaBirds Other
087GCA_028020825.1tawny frogmouthPodargus strigoidesBirds Other
088GCA_965140915.1greater scaupAythya marilaBirds Other
089GCF_963932015.1northern pintailAnas acutaBirds Other
090GCF_009819795.1tufted duckAythya fuligulaBirds Other
091GCA_027574665.1KaguRhynochetos jubatusBirds Waterbirds
092GCF_004027225.2kakapoStrigops habroptilusBirds Landbirds
093GCF_037038585.1band-tailed pigeonPatagioenas fasciataBirds Other
094GCA_009769525.1yellow-throated sandgrousePterocles gutturalisBirds Other
095GCA_039906565.1mountain owlet-nightjarAegotheles albertisiBirds Other
096GCF_017976375.1common cuckooCuculus canorusBirds Other
097GCA_009769605.1Abyssinian ground hornbillBucorvus abyssinicusBirds Landbirds
098GCA_036873955.1Brazilian merganserMergus octosetaceusBirds Other
099GCA_964237585.1common moorhenGallinula chloropusBirds Waterbirds
100GCA_020800305.1takahePorphyrio hochstetteriBirds Waterbirds
101GCA_964273445.1Eurasian collared-doveStreptopelia decaoctoBirds Other
102GCA_963264785.1Mauritius parakeetPsittacula echoBirds Landbirds
103GCF_036013475.1rock doveColumba liviaBirds Other
104GCA_020746105.1surucua trogonTrogon surrucuraBirds Landbirds
105GCA_963082525.1pink pigeonNesoenas mayeriBirds Other
106GCA_045345405.1golden parakeetGuaruba guarubaBirds Landbirds
107GCA_028858755.1blue-and-gold macawAra araraunaBirds Landbirds
108GCA_039720435.1yellow-crowned amazonAmazona ochrocephala Birds Landbirds
109GCF_037157495.1swift parrotLathamus discolorBirds Landbirds
110GCA_020745705.1whiskered treeswiftHemiprocne comataBirds Other
111GCF_012275295.1budgerigarMelopsittacus undulatusBirds Landbirds
112GCA_009819595.1carmine bee-eaterMerops nubicusBirds Landbirds
113GCA_021292165.1Chinese crocodile lizardShinisaurus crocodilurusReptiles
114GCF_028858725.1speckled mousebirdColius striatusBirds Landbirds
115GCA_047922985.1elegant crested tinamouEudromia elegansBirds Other
116GCA_965178545.1Western jackdawColoeus monedulaBirds Landbirds
117GCF_016700215.2white leghorn layer chickenGallus gallusBirds Other
118GCA_046129655.1blue jayCyanocitta cristataBirds Landbirds
119GCF_020740795.1common swiftApus apusBirds Other
120GCF_030035675.1Florida worm lizardRhineura floridanaReptiles
121GCF_009829145.1lanced-tailed manakinChiroxiphia lanceolataBirds Landbirds
122GCF_020740725.1Hawaiian crowCorvus hawaiiensisBirds Landbirds
123GCF_036250125.1white-crowned manakinDixiphia pipraBirds Landbirds
124GCF_009650955.1New Caledonian crowCorvus moneduloidesBirds Landbirds
125GCA_023637945.2long-tailed hermitPhaethornis superciliosusBirds Other
126GCA_016904835.1riflemanAcanthisitta chlorisBirds Other
127GCF_028583425.1leopard geckoEublepharis maculariusReptiles
128GCA_014706295.1Obi paradise-crowLycocorax pyrrhopterus obiensisBirds Landbirds
129GCA_901699155.2European turtle doveStreptopelia turturBirds Other
130GCF_023343835.1rock ptarmiganLagopus mutaBirds Other
131GCA_045364795.1Xingu scale-backed antbirdWillisornis viduaBirds Landbirds
132GCF_023053635.1Southern alligator lizardElgaria multicarinata webbiiReptiles
133GCA_029215775.1San Diegan legless lizardAnniella stebbinsiReptiles
134GCF_036169615.1tourmaline sunangelHeliangelus exortisBirds Other
135GCA_951394365.1Western capercaillieTetrao urogallusBirds Other
136GCF_026979565.1village indigobirdVidua chalybeataBirds Landbirds
137GCF_030490865.1black-capped chickadeePoecile atricapillusBirds Landbirds
138GCF_003957555.1Anna's hummingbirdCalypte annaBirds Other
139GCA_017639485.1European golden ploverPluvialis apricariaBirds Waterbirds
140GCF_029931775.1European leaf-toed geckoEuleptes europaeaReptiles
141GCF_963662255.1white-throated dipperCinclus cinclusBirds Landbirds
142GCA_964188175.1Italian wall lizardPodarcis siculusReptiles
143GCF_027172205.1Aeolian wall lizardPodarcis raffoneiReptiles
144GCA_964270895.1Filfola wall lizardPodarcis filfolensisReptiles
145GCA_964188315.1common wall lizardPodarcis muralisReptiles
146GCA_963513975.1common chaffinchFringilla coelebsBirds Landbirds
147GCA_048771995.1zebra finchTaeniopygia guttataBirds Landbirds
148GCA_965153285.1Tyrrhenian wall lizardPodarcis tiliguertaReptiles
149GCA_964106915.2Skyros wall lizardPodarcis gaigeaeReptiles
150GCA_965231275.1silver-eyeZosterops lateralisBirds Landbirds
151GCA_027559615.1common mynaAcridotheres tristisBirds Landbirds
152GCA_964234715.1Dalmatian wall lizardPodarcis melisellensisReptiles
153GCA_965112155.1Columbretes wall lizardPodarcis liolepisReptiles
154GCF_020745825.1red-winged blackbirdAgelaius phoeniceusBirds Landbirds
155GCA_965113315.1Andalusian wall lizardPodarcis vaucheriReptiles
156GCF_036417665.1house sparrowPasser domesticusBirds Landbirds
157GCA_964106645.2Ibiza wall lizardPodarcis pityusensisReptiles
158GCA_951804945.1Cretan wall lizardPodarcis cretensisReptiles
159GCF_009819885.2Swainson's thrushCatharus ustulatusBirds Landbirds
160GCA_036010785.1seaside sparrowAmmospiza maritimaBirds Landbirds
161GCA_039878825.1king quailCoturnix chinensisBirds Other
162GCF_027477595.1house finchHaemorhous mexicanusBirds Landbirds
163GCA_031885435.1Savannah sparrowPasserculus sandwichensisBirds Landbirds
164GCF_027887145.1saltmarsh sparrowAmmodramus caudacutusBirds Landbirds
165GCA_047830755.1white-throated sparrowZonotrichia albicollisBirds Landbirds
166GCA_014839755.1garden warblerSylvia borinBirds Landbirds
167GCF_009819535.1sand lizardLacerta agilisReptiles
168GCF_027579445.1Nelson's sparrowAmmospiza nelsoniBirds Landbirds
169GCF_029582105.1eastern black-eared wheatearOenanthe melanoleucaBirds Landbirds
170GCF_009819655.1European blackcapSylvia atricapillaBirds Landbirds
171GCA_046129695.1Bengalese finchLonchura striata domesticaBirds Landbirds
172GCF_963506605.1European common lizardZootoca viviparaReptiles
173GCA_035046505.1blue-tongue skinkTiliqua scincoidesReptiles
174GCF_014839835.1downy woodpeckerDryobates pubescensBirds Landbirds
175GCF_028018845.1swamp sparrowMelospiza georgianaBirds Landbirds
176GCA_903797595.2European robinErithacus rubeculaBirds Landbirds
177GCA_046126795.1Smith's blind skinkDibamus smithiReptiles
178GCF_015227805.1barn swallowHirundo rusticaBirds Landbirds
179GCA_964188305.1Bocage's wall lizardPodarcis bocageiReptiles
180GCF_015220805.1red-fronted tinkerbirdPogoniulus pusillusBirds Landbirds
181GCF_035770615.1song sparrowMelospiza melodiaBirds Landbirds
182GCA_964252035.1Aegean wall lizardPodarcis erhardiiReptiles
183GCA_009764595.1common yellowthroatGeothlypis trichasBirds Landbirds
184GCF_019393635.1monito del montesDromiciops gliroidesMammals Other
185GCA_003287225.2koalaPhascolarctos cinereusMammals Other
186GCA_030412105.1stout iguanaCyclura pinguisReptiles
187GCF_027887165.1gray short-tailed opossumMonodelphis domesticaMammals Other
188GCF_028372415.1Tammar wallabyMacropus eugeniiMammals Other
189GCF_011100635.1common brushtail possumTrichosurus vulpeculaMammals Other
190GCF_015852505.1short-beaked echidnaTachyglossus aculeatusMammals Other
191GCA_030867105.1olive pythonLiasis olivaceusReptiles
192GCF_004115215.2platypusOrnithorhynchus anatinusMammals Other
193GCA_048126345.1marsupial moleNotoryctes typhlopsMammals Other
194GCF_035149785.1viper boaCandoia asperaReptiles
195GCF_020826845.1Southern black rhinocerosDiceros bicornis minorMammals Laurasiatheria
196GCA_031878705.1Malayan tapirTapirus indicusMammals Laurasiatheria
197GCA_037893015.1greater bilbyMacrotis lagotisMammals Other
198GCA_046562895.1Amazon manateeTrichechus inunguisMammals Other
199GCA_023333525.2Western whiptail stejnegeriAspidoscelis tigris stejnegeriReptiles
200GCA_030035585.1dugongDugong dugonMammals Other
201GCA_036426135.1Arabian horseEquus caballusMammals Laurasiatheria
202GCF_024166365.1Asian elephantElephas maximus indicusMammals Other
203GCF_030014295.1African elephantLoxodonta africanaMammals Other
204GCF_027409185.1Philippine flying lemurCynocephalus volansMammals Euarchontoglires
205GCF_028885655.2Sumatran orangutanPongo abelii Mammals Euarchontoglires
206GCF_028885625.2Bornean orangutanPongo pygmaeusMammals Euarchontoglires
207GCA_048593235.1fat-tailed dunnartSminthopsis crassicaudataMammals Other
208GCF_029281585.2gorillaGorilla gorillaMammals Euarchontoglires
209GCF_037993035.1crab-eating macaqueMacaca fascicularisMammals Euarchontoglires
210hs1humanHomo sapiensMammals Euarchontoglires
211GCF_028858775.2chimpanzeePan troglodytesMammals Euarchontoglires
212GCF_029289425.2bonoboPan paniscusMammals Euarchontoglires
213GCA_030440675.1panther chameleonFurcifer pardalisReptiles
214hg38humanHomo sapiensMammals Euarchontoglires
215GCF_028878055.3siamang gibbonSymphalangus syndactylusMammals Euarchontoglires
216GCA_043880545.1Greater mouse-tailed batRhinopoma microphyllumMammals Laurasiatheria
217GCF_015220235.1Linnaeus's two-toed slothCholoepus didactylusMammals Other
218GCA_047715975.1lizards B.pumilumBradypodion pumilumReptiles
219GCF_028564815.1North Atlantic right whaleEubalaena glacialisMammals Laurasiatheria
220GCF_004115265.2greater horseshoe batRhinolophus ferrumequinumMammals Laurasiatheria
221GCA_043728065.1intermediate horseshoe batRhinolophus affinisMammals Laurasiatheria
222GCF_009762305.2California sea lionZalophus californianusMammals Laurasiatheria
223GCF_028021215.1gray whaleEschrichtius robustusMammals Laurasiatheria
224GCF_037176765.1brown anoleAnolis sagreiReptiles
225GCA_049354715.1common marmosetCallithrix jacchusMammals Euarchontoglires
226GCA_041834305.1humpback whaleMegaptera novaeangliaeMammals Laurasiatheria
227GCA_048565385.1Bolivian squirrel monkeySaimiri boliviensisMammals Euarchontoglires
228GCF_949987535.1common minke whaleBalaenoptera acutorostrataMammals Laurasiatheria
229GCF_030028045.1common hippopotamusHippopotamus amphibiusMammals Laurasiatheria
230GCA_031876335.1intermediate roundleaf batHipposideros larvatusMammals Laurasiatheria
231GCA_023851605.1Southern tamandua Tamandua tetradactylaMammals Other
232GCA_965194805.1sei whaleBalaenoptera borealisMammals Laurasiatheria
233GCF_028018385.1clouded leopardNeofelis nebulosaMammals Laurasiatheria
234GCA_965194825.1finback whaleBalaenoptera physalusMammals Laurasiatheria
235GCA_964656455.1grey sealHalichoerus grypusMammals Laurasiatheria
236GCF_009873245.2blue whaleBalaenoptera musculusMammals Laurasiatheria
237GCF_030445035.2nine-banded armadilloDasypus novemcinctusMammals Other
238GCF_028023285.1Rice's whaleBalaenoptera riceiMammals Laurasiatheria
239GCA_964194185.1lesser horseshoe batRhinolophus hipposiderosMammals Laurasiatheria
240GCF_043159975.1pig-tailed macaqueMacaca nemestrinaMammals Euarchontoglires
241GCF_937001465.1killer whaleOrcinus orcaMammals Laurasiatheria
242GCA_005190385.3narwhalMonodon monocerosMammals Laurasiatheria
243GCF_039906515.1false killer whalePseudorca crassidensMammals Laurasiatheria
244GCA_964270905.1Atlantic white-sided dolphinLagenorhynchus acutusMammals Laurasiatheria
245GCA_036417435.1Amazon river dolphinInia geoffrensisMammals Laurasiatheria
246GCA_964165515.1Sowerby's beaked whaleMesoplodon bidensMammals Laurasiatheria
247GCF_025265405.1Blainville's beaked whaleMesoplodon densirostrisMammals Laurasiatheria
248GCA_964341445.1True's beaked whaleMesoplodon mirusMammals Laurasiatheria
249GCA_949752795.1North Atlantic bottlenose whaleHyperoodon ampullatusMammals Laurasiatheria
250GCA_964374135.1Risso's dolphinGrampus griseusMammals Laurasiatheria
251GCA_905319855.2gray wolfCanis lupusMammals Laurasiatheria
252GCF_011100685.1dogCanis lupus familiarisMammals Laurasiatheria
253GCF_963924675.1harbor porpoisePhocoena phocoenaMammals Laurasiatheria
254GCA_040955705.1African hunting dogLycaon pictusMammals Laurasiatheria
255GCF_949774975.1white-beaked dolphinLagenorhynchus albirostrisMammals Laurasiatheria
256GCF_008692025.1vaquitaPhocoena sinusMammals Laurasiatheria
257GCA_043727835.1Stoliczka's trident batAselliscus stoliczkanusMammals Laurasiatheria
258GCF_011762595.1common bottlenose dolphinTursiops truncatusMammals Laurasiatheria
259GCF_963455315.2long-finned pilot whaleGlobicephala melasMammals Laurasiatheria
260GCF_949987515.2saddleback dolphinDelphinus delphisMammals Laurasiatheria
261GCA_043748575.1Northern woolly horseshoe batRhinolophus perniger lanosusMammals Laurasiatheria
262GCA_951394435.1striped dolphinStenella coeruleoalbaMammals Laurasiatheria
263GCA_963455335.1European pine martenMartes martesMammals Laurasiatheria
264GCA_043880425.1Yong hoi sen's woolly horseshoe batRhinolophus yonghoiseniMammals Laurasiatheria
265GCA_048593285.1tiger quollDasyurus maculatusMammals Other
266GCF_048164855.1Mexican gray wolfCanis lupusMammals Laurasiatheria
267GCF_026419965.1pygmy sperm whaleKogia brevicepsMammals Laurasiatheria
268GCF_030020395.1Chinese pangolinManis pentadactylaMammals Laurasiatheria
269GCF_922984935.1European badgerMeles melesMammals Laurasiatheria
270GCA_048593225.1Tasmanian devilSarcophilus harrisiiMammals Other
271GCA_043880285.1Cyclops roundleaf batDoryrhina cyclopsMammals Laurasiatheria
272GCA_964106825.2red foxVulpes vulpesMammals Laurasiatheria
273GCA_048338725.1pigSus scrofaMammals Laurasiatheria
274GCF_007474595.2Canada lynxLynx canadensisMammals Laurasiatheria
275GCF_009829155.1stoutMustela ermineaMammals Laurasiatheria
276GCF_030435805.1European minkMustela lutreolaMammals Laurasiatheria
277GCF_014176215.1Egyptian rousetteRousettus aegyptiacusMammals Laurasiatheria
278GCA_964106545.1American minkNeogale visonMammals Laurasiatheria
279GCF_902655055.1Eurasian otterLutra lutraMammals Laurasiatheria
280GCA_043728145.1trefoil horseshoe batRhinolophus trifoliatusMammals Laurasiatheria
281GCF_020740605.2ring-tailed lemurLemur cattaMammals Euarchontoglires
282GCF_902686445.1grey squirrelSciurus carolinensis Mammals Euarchontoglires
283GCA_026018925.1large tree shrewTupaia tanaMammals Euarchontoglires
284GCA_902686455.2Eurasian red squirrelSciurus vulgarisMammals Euarchontoglires
285GCA_964662115.1least weasel Mustela nivalis vulgarisMammals Laurasiatheria
286GCA_028571685.1yellow-spotted rock hyraxHeterohyrax bruceiMammals Other
287GCF_910594005.1red deerCervus elaphusMammals Laurasiatheria
288GCA_048126745.1fallow deerDama damaMammals Laurasiatheria
289GCF_036321535.1Dromedary camelCamelus dromedariusMammals Laurasiatheria
290GCF_027406575.1sunda slow lorisNycticebus coucangMammals Euarchontoglires
291GCA_030848825.1Brazilian free-tailed batTadarida brasiliensisMammals Laurasiatheria
292GCF_963930625.1Reeves' muntjacMuntiacus reevesiMammals Laurasiatheria
293GCF_003369695.1Brahman cowBos taurusMammals Laurasiatheria
294GCA_041735815.1goatCapra hircusMammals Laurasiatheria
295GCA_040805955.1domestic sheepOvis ariesMammals Laurasiatheria
296GCF_042477335.2bighorn sheepOvis canadensisMammals Laurasiatheria
297GCA_964194105.1European ground squirrelSpermophilus citellusMammals Euarchontoglires
298GCF_047511675.1yellow bellied marmotMarmota flaviventrisMammals Euarchontoglires
299GCA_037157525.1Alvarez's mastiff batMolossus alvarezi Mammals Laurasiatheria
300GCA_039880945.1Ebon mastiff batMolossus nigricansMammals Laurasiatheria
301GCA_024294585.1snub-nosed viberVipera latasteiReptiles
302GCF_014108415.1Pallas's mastiff batMolossus molossusMammals Laurasiatheria
303GCA_964146895.2Schreibers' long-fingered batMiniopterus schreibersiiMammals Laurasiatheria
304GCA_048772815.1golden-mantled ground squirrelCallospermophilus lateralisMammals Euarchontoglires
305GCF_036850765.1greater sac-winged batSaccopteryx bilineataMammals Laurasiatheria
306GCF_036850995.1lesser sac-winged batSaccopteryx lepturaMammals Laurasiatheria
307GCA_037038545.1proboscis batRhynchonycteris nasoMammals Laurasiatheria
308GCA_964194415.1adderVipera berusReptiles
309GCA_022682495.2common vampire batDesmodus rotundusMammals Laurasiatheria
310GCA_043880595.1Lesser false vampire batMegaderma spasmaMammals Laurasiatheria
311GCA_039655065.1Merriam's long-tongued batGlossophaga muticaMammals Laurasiatheria
312GCA_045843805.1Arctic ground squirrelUrocitellus parryiiMammals Euarchontoglires
313GCA_047511655.1North American beaverCastor canadensisMammals Euarchontoglires
314GCA_028451465.1North American porcupineErethizon dorsatumMammals Euarchontoglires
315GCA_043748645.1Angolan free-tailed batMops condylurusMammals Laurasiatheria
316GCA_964194135.1European moleTalpa europaeaMammals Laurasiatheria
317GCA_038363095.2great fruit-eating batArtibeus lituratusMammals Laurasiatheria
318GCA_043290085.1black and rufous elephant shrewRhynchocyon petersiMammals Other
319GCF_004126475.2pale spear-nosed batPhyllostomus discolorMammals Laurasiatheria
320GCA_964094495.2whiskered batMyotis mystacinusMammals Laurasiatheria
321GCA_947247035.1Hungarian meadow viperVipera ursiniiReptiles
322GCA_963455305.1brown big-eared batPlecotus auritusMammals Laurasiatheria
323GCA_038363145.1intermediate fruit-eating batArtibeus intermediusMammals Laurasiatheria
324GCF_027574615.1big brown batEptesicus fuscusMammals Laurasiatheria
325GCF_014108235.1greater mouse-eared batMyotis myotisMammals Laurasiatheria
326GCF_963259705.1Daubenton's batMyotis daubentoniiMammals Laurasiatheria
327GCA_951640355.1northern batEptesicus nilssonii Mammals Laurasiatheria
328GCA_964212035.2Natterer's batMyotis nattereriMammals Laurasiatheria
329GCA_965115925.1Geoffroy's batMyotis emarginatusMammals Laurasiatheria
330GCA_026230055.1Townsend's big-eared batCorynorhinus townsendiiMammals Laurasiatheria
331GCA_046562885.1jaguarPanthera oncaMammals Laurasiatheria
332GCF_964237555.1European rabbitOryctolagus cuniculusMammals Euarchontoglires
333GCA_963383645.1common dormouseMuscardinus avellanariusMammals Euarchontoglires
334GCA_027563665.1pallid batAntrozous pallidusMammals Laurasiatheria
335GCA_048771875.1common gundiCtenodactylus gundiMammals Euarchontoglires
336GCA_964273705.1barred grass snakeNatrix helveticaReptiles
337GCA_964264875.2lesser noctuleNyctalus leisleriMammals Laurasiatheria
338GCF_020740685.1Lesser Egyptian jerboaJaculus jaculusMammals Euarchontoglires
339GCA_949987585.1soprano pipistrellePipistrellus pygmaeusMammals Laurasiatheria
340GCF_014108245.1Kuhl's pipistrellePipistrellus kuhliiMammals Laurasiatheria
341GCA_964656225.1Nathusius's pipistrellePipistrellus nathusiiMammals Laurasiatheria
342GCA_963924515.1particolored batVespertilio murinusMammals Laurasiatheria
343GCA_027410445.1painted frogDiscoglossus pictusAmphibians
344GCA_964339955.1Hanaki's dwarf batPipistrellus hanakiMammals Laurasiatheria
345GCF_030435755.1American pikaOchotona princepsMammals Euarchontoglires
346GCF_009769535.1Western terrestrial garter snakeThamnophis elegansReptiles
347GCF_031021105.1royal ground snakeErythrolamprus reginaeReptiles
348GCF_903992535.2European water voleArvicola amphibiusMammals Euarchontoglires
349GCA_011762505.3Nile ratArvicanthis niloticusMammals Euarchontoglires
350GCF_950005125.1European snow voleChionomys nivalisMammals Euarchontoglires
351GCA_037038515.1Eastern meadow voleMicrotus pennsylvanicusMammals Euarchontoglires
352GCA_964271855.1Crete spiny mouseAcomys minousMammals Euarchontoglires
353GCF_903995425.1Southern grasshopper mouseOnychomys torridusMammals Euarchontoglires
354GCA_026229955.1North American deer mousePeromyscus maniculatus sonoriensisMammals Euarchontoglires
355GCF_903995435.1golden spiny mouseAcomys russatusMammals Euarchontoglires
356mm39mouseMus musculusMammals Euarchontoglires
357GCF_015227675.2Norway ratRattus norvegicusMammals Euarchontoglires
358GCA_949316315.1house mouseMus musculusMammals Euarchontoglires
359GCF_947179515.1European woodmouseApodemus sylvaticusMammals Euarchontoglires
360GCA_031878675.1Botta's pocket gopherThomomys bottaeMammals Euarchontoglires
361GCA_903992545.1common pipistrellePipistrellus pipistrellusMammals Laurasiatheria
362GCF_950295315.1European hedgehogErinaceus europaeusMammals Laurasiatheria
363GCA_963924665.1European harvest mouseMicromys minutusMammals Euarchontoglires
364GCF_027595985.1European shrewSorex araneusMammals Laurasiatheria
365GCF_024139225.1Etruscan shrewSuncus etruscusMammals Laurasiatheria
366GCA_038501925.1Peter's clawed frogXenopus petersiiAmphibians
367GCF_027358695.1plain spadefoot toadSpea bombifronsAmphibians
368GCF_037176945.1African coelacanthLatimeria chalumnaeFishes Other
369GCF_027789765.1hourglass treefrogDendropsophus ebraccatusAmphibians
370GCA_038048845.1Fleay's barred frogMixophyes fleayiAmphibians
371GCF_035609145.1coquiEleutherodactylus coquiAmphibians
372GCF_905171765.1European toadBufo bufoAmphibians
373GCF_029499605.1Sardinian treefrogHyla sardaAmphibians
374GCA_031893055.1rufous frogLeptodactylus fuscusAmphibians
375GCF_040894005.1tungara frogEngystomops pustulosusAmphibians
376GCF_028390025.1Southern corroboree frogPseudophryne corroboreeAmphibians
377GCF_036172605.1common spadefoot toadPelobates fuscusAmphibians
378GCA_048565345.1golden mantellaMantella aurantiacaAmphibians
379GCF_040937935.1Riggenbach's reed frogHyperolius riggenbachiAmphibians
380GCF_032444005.1mimic poison frogRanitomeya imitatorAmphibians
381GCA_027917425.1Eastern narrow-mouthed toadGastrophryne carolinensisAmphibians
382GCA_965119305.1pool frogPelophylax lessonaeAmphibians
383GCA_048569485.1Edward's Rocket FrogAnomaloglossus baeobatrachusAmphibians
384GCF_905171775.1European common frogRana temporariaAmphibians
385GCF_027579735.1European fire-bellied toadBombina bombinaAmphibians
386GCA_037306005.1Mexican burrowing toadRhinophrynus dorsalisAmphibians
387GCA_964205295.1yellow-bellied toadBombina variegataAmphibians
388GCA_036172795.1Iberian parsley frogPelodytes ibericusAmphibians
389GCF_902713425.1sterletAcipenser ruthenusFishes Ray Finned
390GCF_900747795.2reedfishErpetoichthys calabaricusFishes Ray Finned
391GCF_036365525.1horn sharkHeterodontus francisciFishes Other
392GCF_035084215.1sharpnose sevengill sharkHeptranchias perloFishes Other
393GCA_964194155.1basking sharkCetorhinus maximusFishes Other
394GCF_017639515.1great white sharkCarcharodon carchariasFishes Other
395GCF_044704955.1Japanese sawsharkPristiophorus japonicusFishes Other
396GCA_964213995.1starry smooth-hound sharkMustelus asteriasFishes Other
397GCF_020745735.1epaulette sharkHemiscyllium ocellatumFishes Other
398GCF_030684315.1zebra sharkStegostoma tigrinumFishes Other
399GCF_009764475.1smalltooth sawfishPristis pectinataFishes Other
400GCF_902713615.1small-spotted catsharkScyliorhinus caniculaFishes Other
401GCF_036373705.1bowfinAmia calvaFishes Ray Finned
402GCF_040954835.1spotted garLepisosteus oculatusFishes Ray Finned
403GCA_035084275.1spotted ratfishHydrolagus collieiFishes Other
404GCF_036971445.1lesser electric rayNarcine bancroftiiFishes Other
405GCF_030028105.1Atlantic manta rayMobula birostrisFishes Other
406GCF_030144855.1Atlantic stingrayHypanus sabinusFishes Other
407GCA_963514005.1blonde rayRaja brachyuraFishes Other
408GCF_010909765.2thorny skateAmblyraja radiataFishes Other
409GCF_013368585.1Indo-pacific tarponMegalops cyprinoidesFishes Ray Finned
410GCF_013347855.1European eelAnguilla anguillaFishes Ray Finned
411GCF_900964775.1golden arowanaScleropages formosusFishes Ray Finned
412GCF_963514075.1European congerConger congerFishes Ray Finned
413GCA_951799395.1greater argentineArgentina silusFishes Ray Finned
414GCF_902362185.1milkfishChanos chanosFishes Ray Finned
415GCA_964263955.1common whitefishCoregonus lavaretusFishes Ray Finned
416GCA_963989245.1pencil smeltNansenia antarcticaFishes Ray Finned
417GCF_011004845.1Northern pikeEsox luciusFishes Ray Finned
418GCA_901001165.2brown troutSalmo truttaFishes Ray Finned
419GCF_900700375.1denticle herringDenticeps clupeoidesFishes Ray Finned
420GCA_963457725.1European spratSprattus sprattusFishes Ray Finned
421GCA_041902795.1electric eelElectrophorus electricusFishes Ray Finned
422GCA_048544225.1Osbeck's grenadier anchovyCoilia mystusFishes Ray Finned
423GCA_949987555.1large-eye snaggletoothBorostomias antarcticusFishes Ray Finned
424GCF_963854185.1sardineSardina pilchardusFishes Ray Finned
425GCF_018492685.1American shadAlosa sapidissimaFishes Ray Finned
426GCA_936440315.1barbelBarbus barbusFishes Ray Finned
427GCF_030463535.1golden doradoSalminus brasiliensisFishes Ray Finned
428GCF_023375975.1Mexican tetraAstyanax mexicanusFishes Ray Finned
429GCA_944039275.1zebrafishDanio rerioFishes Ray Finned
430GCA_048301585.1Rhinogobio nasutusRhinogobio nasutusFishes Ray Finned
431GCF_963082965.1common carpCarassius carassiusFishes Ray Finned
432GCF_015220715.1red-bellied piranhaPygocentrus nattereriFishes Ray Finned
433GCA_038355195.1rainbow smeltOsmerus mordaxFishes Ray Finned
434GCF_963692335.1European smeltOsmerus eperlanusFishes Ray Finned
435GCA_947034865.1stone loachBarbatula barbatulaFishes Ray Finned
436GCA_038024135.1blacktail shinerCyprinella venustaFishes Ray Finned
437GCA_949357685.1gudgeonGobio gobioFishes Ray Finned
438GCA_965113295.1common daceLeuciscus leuciscusFishes Ray Finned
439GCA_963993115.1common breamAbramis bramaFishes Ray Finned
440GCA_951802725.1roach minnowRutilus rutilusFishes Ray Finned
441GCA_949319135.1European chubSqualius cephalusFishes Ray Finned
442GCA_964197995.1common ruddScardinius erythrophthalmusFishes Ray Finned
443GCA_949152265.1Eurasian minnowPhoxinus phoxinusFishes Ray Finned
444GCF_029633855.1trahiraHoplias malabaricusFishes Ray Finned
445GCF_027358585.1striped catfishPangasianodon hypophthalmusFishes Ray Finned
446GCA_036784965.1Arctic charSalvelinus alpinus oquassaFishes Ray Finned
447GCA_946808225.1Aristotle's catfishSilurus aristotelisFishes Ray Finned
448GCA_024256435.1North African catfishClarias gariepinusFishes Ray Finned
449GCA_048537225.1Bermuda beardfishPolymixia cf. hollisteraeFishes Ray Finned
450GCA_047511565.1beardfishPolymixia loweiFishes Ray Finned
451GCF_030014385.1Rosablanca cavefishTrichomycterus rosablancaFishes Ray Finned
452GCF_902150065.1pinecone soldierfishMyripristis murdjanFishes Ray Finned
453GCA_048128805.1bight redfishCentroberyx gerrardiFishes Ray Finned
454GCA_017639675.1peladillaAplochiton taeniatusFishes Ray Finned
455GCA_048569125.1silver spinyfinDiretmus argenteusFishes Ray Finned
456GCA_963921795.1Lantern fishNannobrachium achirusFishes Ray Finned
457GCF_027579695.1blue salmon catfishNeoarius graeffeiFishes Ray Finned
458GCA_042242135.1Australian herringArripis georgianaFishes Ray Finned
459GCF_963924715.1northern bluefin tunaThunnus thynnusFishes Ray Finned
460GCF_910596095.1southern bluefin tunaThunnus maccoyiiFishes Ray Finned
461GCF_914725855.1yellowfin tunaThunnus albacaresFishes Ray Finned
462GCA_963454915.1minispotted lanternfishGymnoscopelus microlampasFishes Ray Finned
463GCA_031216445.1Chinese sea bassLateolabrax maculatusFishes Ray Finned
464GCA_963280865.1Brauer's lanternfishGymnoscopelus braueriFishes Ray Finned
465GCF_043641665.1old wifeEnoplosus armatusFishes Ray Finned
466GCF_029633865.1smalleye Pacific opahLampris incognitusFishes Ray Finned
467GCA_964638095.1crested bigscalePoromitra crassicepsFishes Ray Finned
468GCF_017976425.1banded archerfishToxotes jaculatrixFishes Ray Finned
469GCF_042242105.1rough bullseyePempheris klunzingeriFishes Ray Finned
470GCA_019677235.1large-mouth bassMicropterus salmoidesFishes Ray Finned
471GCA_045363895.1sharptooth jobfishPristipomoides typusFishes Ray Finned
472GCA_048128725.1chinamanfishSymphorus nematophorusFishes Ray Finned
473GCA_048129235.1rankin codEpinephelus rankiniFishes Ray Finned
474GCA_048129055.1yellow and blueback fusilierCaesio teresFishes Ray Finned
475GCA_041903045.1giant grouperEpinephelus lanceolatusFishes Ray Finned
476GCF_017976325.1copperband butterflyfishChelmon rostratusFishes Ray Finned
477GCF_020382885.2spotted scatScatophagus argusFishes Ray Finned
478GCF_039877785.1chevron butterflyfishChaetodon trifascialisFishes Ray Finned
479GCA_965226575.1common seabreamPagrus pagrusFishes Ray Finned
480GCA_045362495.1spangled emperorLethrinus nebulosusFishes Ray Finned
481GCF_900324465.2climbing perchAnabas testudineusFishes Ray Finned
482GCA_963691815.1lesser weeverEchiichthys viperaFishes Ray Finned
483GCA_960531495.1John doryZeus faberFishes Ray Finned
484GCF_904848185.1yellowfin sea breamAcanthopagrus latusFishes Ray Finned
485GCA_041753875.1black porgyAcanthopagrus schlegeliiFishes Ray Finned
486GCF_900324485.2zig-zag eelMastacembelus armatusFishes Ray Finned
487GCF_900880675.1gilthead seabreamSparus aurataFishes Ray Finned
488GCF_900963305.1live sharksuckerEcheneis naucratesFishes Ray Finned
489GCA_043250625.1Acadian redfishSebastes fasciatusFishes Ray Finned
490GCF_963691925.1Atlantic mackerelScomber scombrusFishes Ray Finned
491GCF_902148855.1orbiculate cardinalfishSphaeramia orbicularisFishes Ray Finned
492GCA_905171665.2Atlantic horse mackerelTrachurus trachurusFishes Ray Finned
493GCF_015220745.1honeycomb rockfishSebastes umbrosusFishes Ray Finned
494GCF_027409825.1Pacific chub mackerelScomber japonicusFishes Ray Finned
495GCF_900634625.1Indian glassy fishParambassis rangaFishes Ray Finned
496GCA_047301625.1blackspot tuskfishChoerodon schoenleiniiFishes Ray Finned
497GCA_963514085.1thicklip grey mulletChelon labrosusFishes Ray Finned
498GCA_020745685.1cunnerTautogolabrus adspersusFishes Ray Finned
499GCF_963584025.1cuckoo wrasseLabrus mixtusFishes Ray Finned
500GCF_009819705.1Atlantic halibutHippoglossus hippoglossusFishes Ray Finned
501GCA_964266715.1lemon soleMicrostomus kittFishes Ray Finned
502GCF_007364275.1flier cichlidArchocentrus centrarchusFishes Ray Finned
503GCA_963854745.1turbotScophthalmus maximusFishes Ray Finned
504GCA_910591455.2rock gunnelPholis gunnellusFishes Ray Finned
505GCF_963930695.1ballan wrasseLabrus bergyltaFishes Ray Finned
506GCA_963924005.1Bolin’s lanternfishProtomyctophum boliniFishes Ray Finned
507GCF_963576545.1common dabLimanda limandaFishes Ray Finned
508GCA_963514095.1grey gurnardEutrigla gurnardusFishes Ray Finned
509GCA_965226115.1flavescent peacock cichlidAulonocara stuartgrantiFishes Ray Finned
510GCA_951216825.1Antarctic lanternfishElectrona antarcticaFishes Ray Finned
511GCA_963969265.1Chilingali cichlidRhamphochromis chilingaliFishes Ray Finned
512GCA_048301465.1West Atlantic trumpetfishAulostomus maculatusFishes Ray Finned
513GCA_964374335.1Eastern happyAstatotilapia callipteraFishes Ray Finned
514GCF_949316205.1European flounderPlatichthys flesusFishes Ray Finned
515GCA_963971535.1Antarctic jonasfishNotolepis coatsiFishes Ray Finned
516GCF_958295425.1common soleSolea soleaFishes Ray Finned
517GCA_028022725.1blackbelly eelpoutLycodopsis pacificusFishes Ray Finned
518GCA_964188405.1parallel lanternfishProtomyctophum parallelum Fishes Ray Finned
519GCA_910589615.1long-spined sea scorpionTaurulus bubalisFishes Ray Finned
520GCF_902500255.1prehistoric monster fishThalassophryne amazonicaFishes Ray Finned
521GCA_046255685.1Northern cavefishAmblyopsis spelaeaFishes Ray Finned
522GCA_949748355.1limp eelpoutMelanostigma gelatinosumFishes Ray Finned
523GCF_947347685.1European plaicePleuronectes platessaFishes Ray Finned
524GCF_900634795.4Siamese fighting fishBetta splendensFishes Ray Finned
525GCF_017639745.1Boeseman’s rainbowfishMelanotaenia boesemaniFishes Ray Finned
526GCF_009762535.1New Zealand spotty wrasseNotolabrus celidotusFishes Ray Finned
527GCA_963457635.1thickback soleMicrochirus variegatusFishes Ray Finned
528GCA_049190665.1arrowtailMelanonus zugmayeriFishes Ray Finned
529GCA_014839685.1largescale four-eyesAnableps anablepsFishes Ray Finned
530GCA_949987685.1lesseer sand eelAmmodytes marinusFishes Ray Finned
531GCA_027942865.1pejerreyOdontesthes bonariensisFishes Ray Finned
532GCA_947650265.1corkwing wrasseSymphodus melopsFishes Ray Finned
533GCA_949357725.1greater sand eelHyperoplus immaculatusFishes Ray Finned
534GCA_933228915.1telmatherina bontiTelmatherina bontiFishes Ray Finned
535GCA_014839995.1needlefishXenentodon cancilaFishes Ray Finned
536GCF_009769545.1lumpfishCyclopterus lumpusFishes Ray Finned
537GCA_049082185.1crested weedfishCristiceps australisFishes Ray Finned
538GCF_021462225.1darkedged splitfinGirardinichthys multiradiatusFishes Ray Finned
539GCA_963383615.1shannyLipophrys pholisFishes Ray Finned
540GCA_020510985.1convict blennyPholidichthys leucotaeniaFishes Ray Finned
541GCA_964276395.1three-spined sticklebackGasterosteus aculeatusFishes Ray Finned
542GCF_900634415.1channel bull blennyCottoperca gobioFishes Ray Finned
543GCF_902148845.1jewelled blennySalarias fasciatusFishes Ray Finned
544GCA_013358685.1warty frogfishAntennarius maculatusFishes Ray Finned
545GCA_037039145.1banded killifishFundulus diaphanusFishes Ray Finned
546GCA_048126635.1sea sticklebackSpinachia spinachiaFishes Ray Finned
547GCF_949316345.1ninespine sticklebackPungitius pungitiusFishes Ray Finned
548GCA_949606895.1marbled rockcodNotothenia rossii Fishes Ray Finned
549GCA_963422515.1butterfly blennyBlennius ocellarisFishes Ray Finned
550GCA_949987615.1European pollockPollachius pollachiusFishes Ray Finned
551GCA_048628825.1Atlantic silversideMenidia menidiaFishes Ray Finned
552GCF_900634775.1blunt-snouted clingfishGouania willdenowiFishes Ray Finned
553GCF_901000725.2Japanese puffer (torafugu)Takifugu rubripesFishes Ray Finned
554GCF_009829125.3Korean giant-fin mudskipperPeriophthalmus magnuspinnatusFishes Ray Finned
555GCF_902167405.1Atlantic codGadus morhuaFishes Ray Finned
556GCA_951799975.1black gobyGobius nigerFishes Ray Finned
557GCA_044231675.1picturesque dragonetSynchiropus picturatusFishes Ray Finned
558GCA_044231665.1ocellated dragonetNeosynchiropus ocellatusFishes Ray Finned
559GCF_901709675.1greater pipefishSyngnathus acusFishes Ray Finned
560GCA_048301445.1broad-nosed pipefishSyngnathus typhleFishes Ray Finned
561GCA_964030765.1blue whitingMicromesistius poutassouFishes Ray Finned
562GCA_019207075.1belcher's lanceletBranchiostoma belcheriInvertebrates
563GCA_048934315.1sea lampreyPetromyzon marinusFishes Other
564GCA_964198595.1European river lampreyLampetra fluviatilisFishes Other
565GCA_035083965.1European lanceletBranchiostoma lanceolatumInvertebrates
566GCA_015852565.1Florida amphioxusBranchiostoma floridaeInvertebrates
567GCA_964187855.1Atlantic hagfishMyxine glutinosaFishes Other
568GCA_040954625.2tongue acorn wormBalanoglossus misakiensisInvertebrates
569GCF_902459465.1common starfishAsterias rubensInvertebrates
570GCA_947561715.1pink sea squirtAscidia mentulaInvertebrates
571GCA_963082875.1Orange-tipped sea squirtCorella eumyotaInvertebrates
572GCA_963924565.1European sea squirtAscidiella aspersaInvertebrates
573GCA_964204865.1tunicate S.clavaStyela clavaInvertebrates
574GCA_947623445.1light-bulb sea squirtClavelina lepadiformisInvertebrates
575GCA_918807975.1clonial sea squirtAplidium turbinatumInvertebrates
576GCA_963675345.1Trididemnum clinidesTrididemnum clinidesInvertebrates
577GCA_965202585.1Thalia democraticaThalia democraticaInvertebrates

Table 1. Genome assemblies included in the VGP 577-way alignment.

References

Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature. 2021 Apr 29;592(7856):737-746. DOI: 10.1038/s41586-021-03451-0; PMID: 33911273; PMC: PMC8081667

Paten B, Earl D, Nguyen N, Diekhans M, Zerbino D, Haussler D. Cactus: Algorithms for genome multiple sequence alignment. Genome Biol. 2011 Jun 24;12(6):R63. DOI: 10.1186/gb-2011-12-6-r63; PMID: 21703006; PMC: PMC3218810