Description

This track shows a multiple alignment of 577 vertebrate genomes made with Cactus. This alignment represents the largest and most taxonomically diverse vertebrate alignment to date, spanning mammals, birds, fishes, reptiles, and amphibians from the Vertebrate Genomes Project (VGP) and related sequencing initiatives.

All alignments were performed using the Cactus toolkit, which uses a reference-free approach to construct genome alignments and ancestral reconstructions. Unlike traditional progressive alignment methods, Cactus simultaneously considers all input genomes to minimize reference bias and improve alignment accuracy across diverse evolutionary distances.

The alignment includes:

This broad phylogenetic sampling enables comparative genomics studies across the vertebrate tree of life, supporting research in evolution, conservation, and functional genomics.

Data Access

Downloads for data in this track are available from the directories:

Display Conventions and Configuration

Pairwise alignments of each species to the reference genome are displayed as a grayscale density plot (in pack mode) or as a wiggle (in full mode) that indicates alignment quality. In dense display mode, alignments are shown in grayscale using darker values to indicate higher levels of coverage.

Checkboxes on the track configuration page allow selection of the species to include in the pairwise display. Note that excluding species from the pairwise display does not alter the underlying alignment data.

To view detailed information about the alignments at a specific position, zoom the display in to 30,000 or fewer bases, then click on the alignment.

Gap Annotation

The Display chains between alignments configuration option enables display of gaps between alignment blocks in the pairwise alignments in a manner similar to the Chain track display. Missing sequence in any assembly is highlighted in the track display by regions of yellow when zoomed out and by Ns when displayed at base level. The following conventions are used:

Genomic Breaks

Discontinuities in the genomic context (chromosome, scaffold or region) of the aligned DNA in the aligning species are shown as follows:

Base Level

When zoomed-in to the base-level display, the track shows the base composition of each alignment. The numbers and symbols on the Gaps line indicate the lengths of gaps in the reference sequence at those alignment positions relative to the longest non-reference sequence. If there is sufficient space in the display, the size of the gap is shown. If the space is insufficient and the gap size is a multiple of 3, a "*" is displayed; other gap sizes are indicated by "+".

Methods

The VGP 577-way alignment was created using the Cactus multiple genome alignment tool. Cactus employs a reference-free progressive alignment strategy that constructs a series of pairwise alignments organized according to a guide tree, then uses these to build progressively larger alignments up to the full multiple alignment.

Unlike traditional progressive alignment approaches, Cactus performs an additional "bar" phase that identifies and resolves alignment conflicts by considering all genomes simultaneously. This helps reduce reference bias and improves accuracy across diverse evolutionary distances present in vertebrate genomes.

The input genomes represent high-quality chromosome-level assemblies primarily from the Vertebrate Genomes Project, with additional assemblies from NCBI RefSeq and GenBank that meet quality standards for whole-genome alignment.

Sequences (click on header labels to sort by that column)

Default order is by similarity to the reference

count accession
(link to browser)
common
name
scientific name VGP grouping
001GCA_964374335.1Eastern happyAstatotilapia calliptera
reference species
Fishes Ray Finned
002GCA_965226115.1flavescent peacock cichlidAulonocara stuartgrantiFishes Ray Finned
003GCA_963969265.1Chilingali cichlidRhamphochromis chilingaliFishes Ray Finned
004GCF_007364275.1flier cichlidArchocentrus centrarchusFishes Ray Finned
005GCA_963514085.1thicklip grey mulletChelon labrosusFishes Ray Finned
006GCA_020510985.1convict blennyPholidichthys leucotaeniaFishes Ray Finned
007GCF_900634625.1Indian glassy fishParambassis rangaFishes Ray Finned
008GCF_017976425.1banded archerfishToxotes jaculatrixFishes Ray Finned
009GCF_043641665.1old wifeEnoplosus armatusFishes Ray Finned
010GCA_031216445.1Chinese sea bassLateolabrax maculatusFishes Ray Finned
011GCA_041903045.1giant grouperEpinephelus lanceolatusFishes Ray Finned
012GCA_048129235.1rankin codEpinephelus rankiniFishes Ray Finned
013GCA_045363895.1sharptooth jobfishPristipomoides typusFishes Ray Finned
014GCA_042242135.1Australian herringArripis georgianaFishes Ray Finned
015GCF_042242105.1rough bullseyePempheris klunzingeriFishes Ray Finned
016GCA_048128725.1chinamanfishSymphorus nematophorusFishes Ray Finned
017GCA_019677235.1large-mouth bassMicropterus salmoidesFishes Ray Finned
018GCA_048129055.1yellow and blueback fusilierCaesio teresFishes Ray Finned
019GCF_017976325.1copperband butterflyfishChelmon rostratusFishes Ray Finned
020GCF_963924715.1northern bluefin tunaThunnus thynnusFishes Ray Finned
021GCF_910596095.1southern bluefin tunaThunnus maccoyiiFishes Ray Finned
022GCF_914725855.1yellowfin tunaThunnus albacaresFishes Ray Finned
023GCF_039877785.1chevron butterflyfishChaetodon trifascialisFishes Ray Finned
024GCA_965226575.1common seabreamPagrus pagrusFishes Ray Finned
025GCF_015220745.1honeycomb rockfishSebastes umbrosusFishes Ray Finned
026GCA_043250625.1Acadian redfishSebastes fasciatusFishes Ray Finned
027GCA_045362495.1spangled emperorLethrinus nebulosusFishes Ray Finned
028GCA_963691815.1lesser weeverEchiichthys viperaFishes Ray Finned
029GCF_020382885.2spotted scatScatophagus argusFishes Ray Finned
030GCF_900324485.2zig-zag eelMastacembelus armatusFishes Ray Finned
031GCA_905171665.2Atlantic horse mackerelTrachurus trachurusFishes Ray Finned
032GCF_900880675.1gilthead seabreamSparus aurataFishes Ray Finned
033GCA_041753875.1black porgyAcanthopagrus schlegeliiFishes Ray Finned
034GCF_904848185.1yellowfin sea breamAcanthopagrus latusFishes Ray Finned
035GCF_963691925.1Atlantic mackerelScomber scombrusFishes Ray Finned
036GCF_027409825.1Pacific chub mackerelScomber japonicusFishes Ray Finned
037GCF_900324465.2climbing perchAnabas testudineusFishes Ray Finned
038GCF_009819705.1Atlantic halibutHippoglossus hippoglossusFishes Ray Finned
039GCF_900634415.1channel bull blennyCottoperca gobioFishes Ray Finned
040GCF_017639745.1Boeseman’s rainbowfishMelanotaenia boesemaniFishes Ray Finned
041GCA_910591455.2rock gunnelPholis gunnellusFishes Ray Finned
042GCA_027942865.1pejerreyOdontesthes bonariensisFishes Ray Finned
043GCA_963383615.1shannyLipophrys pholisFishes Ray Finned
044GCA_964266715.1lemon soleMicrostomus kittFishes Ray Finned
045GCA_963854745.1turbotScophthalmus maximusFishes Ray Finned
046GCA_949987685.1lesseer sand eelAmmodytes marinusFishes Ray Finned
047GCF_900963305.1live sharksuckerEcheneis naucratesFishes Ray Finned
048GCF_902148845.1jewelled blennySalarias fasciatusFishes Ray Finned
049GCA_049082185.1crested weedfishCristiceps australisFishes Ray Finned
050GCA_020745685.1cunnerTautogolabrus adspersusFishes Ray Finned
051GCA_949357725.1greater sand eelHyperoplus immaculatusFishes Ray Finned
052GCA_014839685.1largescale four-eyesAnableps anablepsFishes Ray Finned
053GCF_963576545.1common dabLimanda limandaFishes Ray Finned
054GCF_009762535.1New Zealand spotty wrasseNotolabrus celidotusFishes Ray Finned
055GCF_963584025.1cuckoo wrasseLabrus mixtusFishes Ray Finned
056GCA_910589615.1long-spined sea scorpionTaurulus bubalisFishes Ray Finned
057GCA_028022725.1blackbelly eelpoutLycodopsis pacificusFishes Ray Finned
058GCF_963930695.1ballan wrasseLabrus bergyltaFishes Ray Finned
059GCA_933228915.1telmatherina bontiTelmatherina bontiFishes Ray Finned
060GCF_949316205.1European flounderPlatichthys flesusFishes Ray Finned
061GCA_048128805.1bight redfishCentroberyx gerrardiFishes Ray Finned
062GCA_963514095.1grey gurnardEutrigla gurnardusFishes Ray Finned
063GCA_014839995.1needlefishXenentodon cancilaFishes Ray Finned
064GCA_963422515.1butterfly blennyBlennius ocellarisFishes Ray Finned
065GCA_047301625.1blackspot tuskfishChoerodon schoenleiniiFishes Ray Finned
066GCF_947347685.1European plaicePleuronectes platessaFishes Ray Finned
067GCA_949606895.1marbled rockcodNotothenia rossii Fishes Ray Finned
068GCA_949748355.1limp eelpoutMelanostigma gelatinosumFishes Ray Finned
069GCF_902150065.1pinecone soldierfishMyripristis murdjanFishes Ray Finned
070GCF_021462225.1darkedged splitfinGirardinichthys multiradiatusFishes Ray Finned
071GCF_009769545.1lumpfishCyclopterus lumpusFishes Ray Finned
072GCA_037039145.1banded killifishFundulus diaphanusFishes Ray Finned
073GCA_947650265.1corkwing wrasseSymphodus melopsFishes Ray Finned
074GCF_958295425.1common soleSolea soleaFishes Ray Finned
075GCF_902148855.1orbiculate cardinalfishSphaeramia orbicularisFishes Ray Finned
076GCA_048628825.1Atlantic silversideMenidia menidiaFishes Ray Finned
077GCA_963457635.1thickback soleMicrochirus variegatusFishes Ray Finned
078GCA_048301465.1West Atlantic trumpetfishAulostomus maculatusFishes Ray Finned
079GCF_900634795.4Siamese fighting fishBetta splendensFishes Ray Finned
080GCA_964276395.1three-spined sticklebackGasterosteus aculeatusFishes Ray Finned
081GCA_964638095.1crested bigscalePoromitra crassicepsFishes Ray Finned
082GCA_048569125.1silver spinyfinDiretmus argenteusFishes Ray Finned
083GCA_048537225.1Bermuda beardfishPolymixia cf. hollisteraeFishes Ray Finned
084GCA_047511565.1beardfishPolymixia loweiFishes Ray Finned
085GCF_949316345.1ninespine sticklebackPungitius pungitiusFishes Ray Finned
086GCF_900634775.1blunt-snouted clingfishGouania willdenowiFishes Ray Finned
087GCA_013358685.1warty frogfishAntennarius maculatusFishes Ray Finned
088GCA_048126635.1sea sticklebackSpinachia spinachiaFishes Ray Finned
089GCF_902500255.1prehistoric monster fishThalassophryne amazonicaFishes Ray Finned
090GCF_029633865.1smalleye Pacific opahLampris incognitusFishes Ray Finned
091GCF_901000725.2Japanese puffer (torafugu)Takifugu rubripesFishes Ray Finned
092GCA_963921795.1Lantern fishNannobrachium achirusFishes Ray Finned
093GCA_963454915.1minispotted lanternfishGymnoscopelus microlampasFishes Ray Finned
094GCA_963280865.1Brauer's lanternfishGymnoscopelus braueriFishes Ray Finned
095GCA_951216825.1Antarctic lanternfishElectrona antarcticaFishes Ray Finned
096GCA_960531495.1John doryZeus faberFishes Ray Finned
097GCA_963924005.1Bolin’s lanternfishProtomyctophum boliniFishes Ray Finned
098GCA_046255685.1Northern cavefishAmblyopsis spelaeaFishes Ray Finned
099GCA_951799975.1black gobyGobius nigerFishes Ray Finned
100GCA_964188405.1parallel lanternfishProtomyctophum parallelum Fishes Ray Finned
101GCF_009829125.3Korean giant-fin mudskipperPeriophthalmus magnuspinnatusFishes Ray Finned
102GCA_049190665.1arrowtailMelanonus zugmayeriFishes Ray Finned
103GCA_044231665.1ocellated dragonetNeosynchiropus ocellatusFishes Ray Finned
104GCA_044231675.1picturesque dragonetSynchiropus picturatusFishes Ray Finned
105GCA_949987615.1European pollockPollachius pollachiusFishes Ray Finned
106GCA_963971535.1Antarctic jonasfishNotolepis coatsiFishes Ray Finned
107GCF_902167405.1Atlantic codGadus morhuaFishes Ray Finned
108GCF_901709675.1greater pipefishSyngnathus acusFishes Ray Finned
109GCA_048301445.1broad-nosed pipefishSyngnathus typhleFishes Ray Finned
110GCA_951799395.1greater argentineArgentina silusFishes Ray Finned
111GCA_964030765.1blue whitingMicromesistius poutassouFishes Ray Finned
112GCA_963989245.1pencil smeltNansenia antarcticaFishes Ray Finned
113GCA_017639675.1peladillaAplochiton taeniatusFishes Ray Finned
114GCA_964263955.1common whitefishCoregonus lavaretusFishes Ray Finned
115GCA_949987555.1large-eye snaggletoothBorostomias antarcticusFishes Ray Finned
116GCA_038355195.1rainbow smeltOsmerus mordaxFishes Ray Finned
117GCF_963692335.1European smeltOsmerus eperlanusFishes Ray Finned
118GCA_901001165.2brown troutSalmo truttaFishes Ray Finned
119GCF_011004845.1Northern pikeEsox luciusFishes Ray Finned
120GCA_036784965.1Arctic charSalvelinus alpinus oquassaFishes Ray Finned
121GCF_013368585.1Indo-pacific tarponMegalops cyprinoidesFishes Ray Finned
122GCF_902362185.1milkfishChanos chanosFishes Ray Finned
123GCF_013347855.1European eelAnguilla anguillaFishes Ray Finned
124GCF_963514075.1European congerConger congerFishes Ray Finned
125GCF_900964775.1golden arowanaScleropages formosusFishes Ray Finned
126GCA_963457725.1European spratSprattus sprattusFishes Ray Finned
127GCA_048544225.1Osbeck's grenadier anchovyCoilia mystusFishes Ray Finned
128GCF_963854185.1sardineSardina pilchardusFishes Ray Finned
129GCF_018492685.1American shadAlosa sapidissimaFishes Ray Finned
130GCF_900700375.1denticle herringDenticeps clupeoidesFishes Ray Finned
131GCA_041902795.1electric eelElectrophorus electricusFishes Ray Finned
132GCF_030463535.1golden doradoSalminus brasiliensisFishes Ray Finned
133GCA_936440315.1barbelBarbus barbusFishes Ray Finned
134GCF_963082965.1common carpCarassius carassiusFishes Ray Finned
135GCF_015220715.1red-bellied piranhaPygocentrus nattereriFishes Ray Finned
136GCF_023375975.1Mexican tetraAstyanax mexicanusFishes Ray Finned
137GCA_048301585.1Rhinogobio nasutusRhinogobio nasutusFishes Ray Finned
138GCA_949357685.1gudgeonGobio gobioFishes Ray Finned
139GCA_944039275.1zebrafishDanio rerioFishes Ray Finned
140GCA_965113295.1common daceLeuciscus leuciscusFishes Ray Finned
141GCA_963993115.1common breamAbramis bramaFishes Ray Finned
142GCA_038024135.1blacktail shinerCyprinella venustaFishes Ray Finned
143GCA_951802725.1roach minnowRutilus rutilusFishes Ray Finned
144GCA_947034865.1stone loachBarbatula barbatulaFishes Ray Finned
145GCA_949319135.1European chubSqualius cephalusFishes Ray Finned
146GCA_964197995.1common ruddScardinius erythrophthalmusFishes Ray Finned
147GCA_949152265.1Eurasian minnowPhoxinus phoxinusFishes Ray Finned
148GCF_036373705.1bowfinAmia calvaFishes Ray Finned
149GCF_029633855.1trahiraHoplias malabaricusFishes Ray Finned
150GCF_040954835.1spotted garLepisosteus oculatusFishes Ray Finned
151GCF_027358585.1striped catfishPangasianodon hypophthalmusFishes Ray Finned
152GCA_946808225.1Aristotle's catfishSilurus aristotelisFishes Ray Finned
153GCA_024256435.1North African catfishClarias gariepinusFishes Ray Finned
154GCF_030014385.1Rosablanca cavefishTrichomycterus rosablancaFishes Ray Finned
155GCF_027579695.1blue salmon catfishNeoarius graeffeiFishes Ray Finned
156GCF_902713425.1sterletAcipenser ruthenusFishes Ray Finned
157GCF_900747795.2reedfishErpetoichthys calabaricusFishes Ray Finned
158GCF_037176945.1African coelacanthLatimeria chalumnaeFishes Other
159GCA_040894355.2Bellinger river turtleMyuchelys georgesiReptiles
160GCA_965152275.1Australian flatback sea turtleNatator depressusReptiles
161GCF_025201925.1Mexican gopher tortoiseGopherus flavomarginatusReptiles
162GCF_015237465.2green sea turtleChelonia mydasReptiles
163GCF_007399415.2Goode's Thornscrub TortoiseGopherus evgoodeiReptiles
164GCA_965140235.1loggerhead sea turtleCaretta carettaReptiles
165GCA_045364815.1arrau turtlePodocnemis expansaReptiles
166GCA_965140295.1Pacific ridleyLepidochelys olivaceaReptiles
167GCA_965140285.1Kemp's ridley sea turtleLepidochelys kempiiReptiles
168GCF_009764565.3leatherback sea turtleDermochelys coriaceaReptiles
169GCA_033958435.1pig-nosed turtleCarettochelys insculptaReptiles
170GCF_028017835.1European pond turtleEmys orbicularisReptiles
171GCA_965152235.1Hawksbill sea turtleEretmochelys imbricataReptiles
172GCA_045781085.1Indian roofed turtlePangshura tectaReptiles
173GCA_030020295.1Indian gharialGavialis gangeticusReptiles
174GCF_030867095.1American alligatorAlligator mississippiensisReptiles
175GCF_040807025.1common ostrichStruthio camelus australisBirds Other
176GCA_021292165.1Chinese crocodile lizardShinisaurus crocodilurusReptiles
177GCF_028583425.1leopard geckoEublepharis maculariusReptiles
178GCA_964188175.1Italian wall lizardPodarcis siculusReptiles
179GCF_029931775.1European leaf-toed geckoEuleptes europaeaReptiles
180GCA_964188315.1common wall lizardPodarcis muralisReptiles
181GCF_027172205.1Aeolian wall lizardPodarcis raffoneiReptiles
182GCA_965153285.1Tyrrhenian wall lizardPodarcis tiliguertaReptiles
183GCA_964106915.2Skyros wall lizardPodarcis gaigeaeReptiles
184GCA_964270895.1Filfola wall lizardPodarcis filfolensisReptiles
185GCA_964234715.1Dalmatian wall lizardPodarcis melisellensisReptiles
186GCA_965112155.1Columbretes wall lizardPodarcis liolepisReptiles
187GCA_965113315.1Andalusian wall lizardPodarcis vaucheriReptiles
188GCF_023053635.1Southern alligator lizardElgaria multicarinata webbiiReptiles
189GCA_964106645.2Ibiza wall lizardPodarcis pityusensisReptiles
190GCA_029215775.1San Diegan legless lizardAnniella stebbinsiReptiles
191GCF_030035675.1Florida worm lizardRhineura floridanaReptiles
192GCA_951804945.1Cretan wall lizardPodarcis cretensisReptiles
193GCF_009819535.1sand lizardLacerta agilisReptiles
194GCF_036417845.1North Island brown kiwiApteryx mantelliBirds Other
195GCF_963506605.1European common lizardZootoca viviparaReptiles
196GCF_036370855.1emuDromaius novaehollandiaeBirds Other
197GCF_028389875.1lesser rhea Rhea pennataBirds Other
198GCA_028022735.1bearded vultureGypaetus barbatusBirds Landbirds
199GCA_046126795.1Smith's blind skinkDibamus smithiReptiles
200GCA_037962945.1king vultureSarcoramphus papaBirds Landbirds
201GCA_964188355.1common buzzardButeo buteoBirds Landbirds
202GCF_929443795.1Northern goshawkAccipiter gentilisBirds Landbirds
203GCF_947461875.1white-tailed eagleHaliaeetus albicillaBirds Landbirds
204GCA_964211825.1common pochardAythya ferinaBirds Other
205GCF_900496995.4European golden eagleAquila chrysaetosBirds Landbirds
206GCA_965140245.1little owlAthene noctuaBirds Landbirds
207GCF_026419915.1harpy eagleHarpia harpyjaBirds Landbirds
208GCA_965151615.1tundra swanCygnus columbianusBirds Other
209GCA_965231335.1Canada gooseBranta canadensisBirds Other
210GCA_964188345.1mallardAnas platyrhynchosBirds Other
211GCA_963989345.1long-tailed duckClangula hyemalisBirds Other
212GCF_040182565.1swan gooseAnser cygnoidesBirds Other
213GCA_045345515.1crested eagleMorphnus guianensisBirds Landbirds
214GCA_964188305.1Bocage's wall lizardPodarcis bocageiReptiles
215GCA_964106855.1Eurasian craneGrus grusBirds Waterbirds
216GCF_028858705.1whooping craneGrus americanaBirds Waterbirds
217GCA_964059595.1common goldeneyeBucephala clangulaBirds Other
218GCA_964195595.2Cory's shearwaterCalonectris borealisBirds Waterbirds
219GCF_036013445.1Nicobar pigeonCaloenas nicobaricaBirds Other
220GCF_036365525.1horn sharkHeterodontus francisciFishes Other
221GCA_965140915.1greater scaupAythya marilaBirds Other
222GCA_964211835.1domestic gooseAnser anserBirds Other
223GCA_963932225.1lesser black-backed gullLarus fuscusBirds Waterbirds
224GCA_964199755.1yellow-legged gullLarus michahellisBirds Waterbirds
225GCA_011004875.1grey crowned-craneBalearica regulorum gibbericepsBirds Waterbirds
226GCA_964034855.1pink-footed gooseAnser brachyrhynchusBirds Other
227GCA_031877795.1tawny owlStrix alucoBirds Landbirds
228GCA_964035555.1red-crested pochardNetta rufinaBirds Other
229GCA_009819825.1red-legged seriemaCariama cristataBirds Landbirds
230GCF_037038585.1band-tailed pigeonPatagioenas fasciataBirds Other
231GCA_965183815.1Eurasian spoonbillPlatalea leucorodiaBirds Waterbirds
232GCF_963924245.1black-headed gullChroicocephalus ridibundusBirds Waterbirds
233GCA_047922985.1elegant crested tinamouEudromia elegansBirds Other
234GCA_964417175.1herring gullLarus argentatusBirds Waterbirds
235GCF_030936135.1red-throated LoonGavia stellataBirds Waterbirds
236GCA_907165065.1Eurasian nightjarCaprimulgus europaeusBirds Other
237GCF_963932015.1northern pintailAnas acutaBirds Other
238GCA_030463565.1dalmatian pelicanPelecanus crispusBirds Waterbirds
239GCA_964106895.1Eurasian curlewNumenius arquataBirds Waterbirds
240GCF_028500815.1black-legged kittiwakeRissa tridactylaBirds Waterbirds
241GCA_030867105.1olive pythonLiasis olivaceusReptiles
242GCA_031468815.1Northern gannetMorus bassanusBirds Waterbirds
243GCF_009769625.2mute swanCygnus olorBirds Other
244GCA_009819775.1American flamingoPhoenicopterus ruberBirds Other
245GCA_009819605.1common ternSterna hirundoBirds Waterbirds
246GCF_963921805.1great cormorantPhalacrocorax carboBirds Waterbirds
247GCA_027474245.1Humboldt penguinSpheniscus humboldtiBirds Waterbirds
248GCA_965231255.1Northern LapwingVanellus vanellusBirds Waterbirds
249GCF_017976375.1common cuckooCuculus canorusBirds Other
250GCA_034619465.1cuckoo-rollerLeptosomus discolorBirds Landbirds
251GCF_013368605.1great potooNyctibius grandisBirds Other
252GCA_964237585.1common moorhenGallinula chloropusBirds Waterbirds
253GCA_028020825.1tawny frogmouthPodargus strigoidesBirds Other
254GCF_035149785.1viper boaCandoia asperaReptiles
255GCA_036417535.1MacQueen's bustardChlamydotis macqueeniiBirds Other
256GCA_020745775.1plumbeous ibisTheristicus caerulescensBirds Waterbirds
257GCA_964252035.1Aegean wall lizardPodarcis erhardiiReptiles
258GCA_963210335.1Mauritius kestrelFalco punctatusBirds Landbirds
259GCA_017639555.1Maguari storkCiconia maguariBirds Waterbirds
260GCF_017639655.2lesser kestrelFalco naumanniBirds Landbirds
261GCF_009819795.1tufted duckAythya fuligulaBirds Other
262GCF_004027225.2kakapoStrigops habroptilusBirds Landbirds
263GCF_015220075.1gyrfalconFalco rusticolusBirds Landbirds
264GCF_023634155.1peregrine falconFalco peregrinusBirds Landbirds
265GCA_035046505.1blue-tongue skinkTiliqua scincoidesReptiles
266GCA_963264785.1Mauritius parakeetPsittacula echoBirds Landbirds
267GCA_964273445.1Eurasian collared-doveStreptopelia decaoctoBirds Other
268GCA_030867145.1hoatzinOpisthocomus hoazinBirds Waterbirds
269GCA_963082525.1pink pigeonNesoenas mayeriBirds Other
270GCA_027574665.1KaguRhynochetos jubatusBirds Waterbirds
271GCA_949628215.1European shagGulosus aristotelisBirds Waterbirds
272GCF_036013475.1rock doveColumba liviaBirds Other
273GCA_023333525.2Western whiptail stejnegeriAspidoscelis tigris stejnegeriReptiles
274GCA_009769605.1Abyssinian ground hornbillBucorvus abyssinicusBirds Landbirds
275GCA_964194155.1basking sharkCetorhinus maximusFishes Other
276GCF_017639515.1great white sharkCarcharodon carchariasFishes Other
277GCA_032164245.1eastern musk turtleSternotherus odoratusReptiles
278GCF_023634085.1saker falconFalco cherrugBirds Landbirds
279GCA_036873955.1Brazilian merganserMergus octosetaceusBirds Other
280GCA_008658365.1razorbillAlca TordaBirds Waterbirds
281GCA_039906565.1mountain owlet-nightjarAegotheles albertisiBirds Other
282GCA_020746105.1surucua trogonTrogon surrucuraBirds Landbirds
283GCF_019393635.1monito del montesDromiciops gliroidesMammals Other
284GCA_030412105.1stout iguanaCyclura pinguisReptiles
285GCA_045345405.1golden parakeetGuaruba guarubaBirds Landbirds
286GCA_030440675.1panther chameleonFurcifer pardalisReptiles
287GCF_035084215.1sharpnose sevengill sharkHeptranchias perloFishes Other
288GCA_965178545.1Western jackdawColoeus monedulaBirds Landbirds
289GCA_039720435.1yellow-crowned amazonAmazona ochrocephala Birds Landbirds
290GCA_020800305.1takahePorphyrio hochstetteriBirds Waterbirds
291GCF_016700215.2white leghorn layer chickenGallus gallusBirds Other
292GCF_012275295.1budgerigarMelopsittacus undulatusBirds Landbirds
293GCA_046129655.1blue jayCyanocitta cristataBirds Landbirds
294GCA_028858755.1blue-and-gold macawAra araraunaBirds Landbirds
295GCA_003287225.2koalaPhascolarctos cinereusMammals Other
296GCA_009819595.1carmine bee-eaterMerops nubicusBirds Landbirds
297GCA_045364795.1Xingu scale-backed antbirdWillisornis viduaBirds Landbirds
298GCF_023638135.1Lanner falconFalco biarmicusBirds Landbirds
299GCA_047715975.1lizards B.pumilumBradypodion pumilumReptiles
300GCF_037157495.1swift parrotLathamus discolorBirds Landbirds
301GCF_026979565.1village indigobirdVidua chalybeataBirds Landbirds
302GCF_030490865.1black-capped chickadeePoecile atricapillusBirds Landbirds
303GCF_028372415.1Tammar wallabyMacropus eugeniiMammals Other
304GCA_009769465.1red-crested turacoTauraco erythrolophusBirds Other
305GCF_020740725.1Hawaiian crowCorvus hawaiiensisBirds Landbirds
306GCF_023343835.1rock ptarmiganLagopus mutaBirds Other
307GCF_009650955.1New Caledonian crowCorvus moneduloidesBirds Landbirds
308GCA_009769525.1yellow-throated sandgrousePterocles gutturalisBirds Other
309GCF_963662255.1white-throated dipperCinclus cinclusBirds Landbirds
310GCA_965231275.1silver-eyeZosterops lateralisBirds Landbirds
311GCF_011100635.1common brushtail possumTrichosurus vulpeculaMammals Other
312GCA_963513975.1common chaffinchFringilla coelebsBirds Landbirds
313GCA_964289735.1red-billed tropicbirdPhaethon aethereusBirds Waterbirds
314GCA_048771995.1zebra finchTaeniopygia guttataBirds Landbirds
315GCF_020826845.1Southern black rhinocerosDiceros bicornis minorMammals Laurasiatheria
316GCF_009829145.1lanced-tailed manakinChiroxiphia lanceolataBirds Landbirds
317GCA_036426135.1Arabian horseEquus caballusMammals Laurasiatheria
318GCA_036010785.1seaside sparrowAmmospiza maritimaBirds Landbirds
319GCA_046562895.1Amazon manateeTrichechus inunguisMammals Other
320GCA_016904835.1riflemanAcanthisitta chlorisBirds Other
321GCA_031878705.1Malayan tapirTapirus indicusMammals Laurasiatheria
322GCA_031885435.1Savannah sparrowPasserculus sandwichensisBirds Landbirds
323GCF_027887145.1saltmarsh sparrowAmmodramus caudacutusBirds Landbirds
324GCA_951394365.1Western capercaillieTetrao urogallusBirds Other
325GCF_044704955.1Japanese sawsharkPristiophorus japonicusFishes Other
326GCF_024166365.1Asian elephantElephas maximus indicusMammals Other
327GCF_009819885.2Swainson's thrushCatharus ustulatusBirds Landbirds
328GCF_030014295.1African elephantLoxodonta africanaMammals Other
329GCF_027887165.1gray short-tailed opossumMonodelphis domesticaMammals Other
330GCF_020745825.1red-winged blackbirdAgelaius phoeniceusBirds Landbirds
331GCF_036250125.1white-crowned manakinDixiphia pipraBirds Landbirds
332GCA_030035585.1dugongDugong dugonMammals Other
333GCA_020745705.1whiskered treeswiftHemiprocne comataBirds Other
334GCA_964213995.1starry smooth-hound sharkMustelus asteriasFishes Other
335GCA_014706295.1Obi paradise-crowLycocorax pyrrhopterus obiensisBirds Landbirds
336GCA_047830755.1white-throated sparrowZonotrichia albicollisBirds Landbirds
337GCF_028858725.1speckled mousebirdColius striatusBirds Landbirds
338GCF_036417665.1house sparrowPasser domesticusBirds Landbirds
339GCA_048126345.1marsupial moleNotoryctes typhlopsMammals Other
340GCA_027559615.1common mynaAcridotheres tristisBirds Landbirds
341GCF_027477595.1house finchHaemorhous mexicanusBirds Landbirds
342GCF_027409185.1Philippine flying lemurCynocephalus volansMammals Euarchontoglires
343GCA_043880545.1Greater mouse-tailed batRhinopoma microphyllumMammals Laurasiatheria
344GCF_028885655.2Sumatran orangutanPongo abelii Mammals Euarchontoglires
345GCF_028885625.2Bornean orangutanPongo pygmaeusMammals Euarchontoglires
346GCF_037993035.1crab-eating macaqueMacaca fascicularisMammals Euarchontoglires
347GCA_024294585.1snub-nosed viberVipera latasteiReptiles
348GCF_028878055.3siamang gibbonSymphalangus syndactylusMammals Euarchontoglires
349GCF_029281585.2gorillaGorilla gorillaMammals Euarchontoglires
350GCF_009762305.2California sea lionZalophus californianusMammals Laurasiatheria
351GCA_048338725.1pigSus scrofaMammals Laurasiatheria
352GCF_014839835.1downy woodpeckerDryobates pubescensBirds Landbirds
353GCF_901001135.1two-lined caecilianRhinatrema bivittatumAmphibians
354hs1humanHomo sapiensMammals Euarchontoglires
355hg38humanHomo sapiensMammals Euarchontoglires
356GCF_028858775.2chimpanzeePan troglodytesMammals Euarchontoglires
357GCF_028018385.1clouded leopardNeofelis nebulosaMammals Laurasiatheria
358GCF_029289425.2bonoboPan paniscusMammals Euarchontoglires
359GCA_023637945.2long-tailed hermitPhaethornis superciliosusBirds Other
360GCF_028564815.1North Atlantic right whaleEubalaena glacialisMammals Laurasiatheria
361GCA_014839755.1garden warblerSylvia borinBirds Landbirds
362GCF_030028045.1common hippopotamusHippopotamus amphibiusMammals Laurasiatheria
363GCA_043728065.1intermediate horseshoe batRhinolophus affinisMammals Laurasiatheria
364GCF_922984935.1European badgerMeles melesMammals Laurasiatheria
365GCF_037176765.1brown anoleAnolis sagreiReptiles
366GCA_963455335.1European pine martenMartes martesMammals Laurasiatheria
367GCA_905319855.2gray wolfCanis lupusMammals Laurasiatheria
368GCF_004115265.2greater horseshoe batRhinolophus ferrumequinumMammals Laurasiatheria
369GCA_040955705.1African hunting dogLycaon pictusMammals Laurasiatheria
370GCF_028021215.1gray whaleEschrichtius robustusMammals Laurasiatheria
371GCF_011100685.1dogCanis lupus familiarisMammals Laurasiatheria
372GCA_031876335.1intermediate roundleaf batHipposideros larvatusMammals Laurasiatheria
373GCA_028571685.1yellow-spotted rock hyraxHeterohyrax bruceiMammals Other
374GCA_048565385.1Bolivian squirrel monkeySaimiri boliviensisMammals Euarchontoglires
375GCA_964656455.1grey sealHalichoerus grypusMammals Laurasiatheria
376GCA_049354715.1common marmosetCallithrix jacchusMammals Euarchontoglires
377GCF_020745735.1epaulette sharkHemiscyllium ocellatumFishes Other
378GCF_029582105.1eastern black-eared wheatearOenanthe melanoleucaBirds Landbirds
379GCA_964194415.1adderVipera berusReptiles
380GCA_041834305.1humpback whaleMegaptera novaeangliaeMammals Laurasiatheria
381GCF_030435805.1European minkMustela lutreolaMammals Laurasiatheria
382GCF_910594005.1red deerCervus elaphusMammals Laurasiatheria
383GCF_902655055.1Eurasian otterLutra lutraMammals Laurasiatheria
384GCA_048126745.1fallow deerDama damaMammals Laurasiatheria
385GCA_026018925.1large tree shrewTupaia tanaMammals Euarchontoglires
386GCF_009873245.2blue whaleBalaenoptera musculusMammals Laurasiatheria
387GCF_963930625.1Reeves' muntjacMuntiacus reevesiMammals Laurasiatheria
388GCA_965194825.1finback whaleBalaenoptera physalusMammals Laurasiatheria
389GCA_030848825.1Brazilian free-tailed batTadarida brasiliensisMammals Laurasiatheria
390GCA_965194805.1sei whaleBalaenoptera borealisMammals Laurasiatheria
391GCF_949987535.1common minke whaleBalaenoptera acutorostrataMammals Laurasiatheria
392GCA_040805955.1domestic sheepOvis ariesMammals Laurasiatheria
393GCA_041735815.1goatCapra hircusMammals Laurasiatheria
394GCF_042477335.2bighorn sheepOvis canadensisMammals Laurasiatheria
395GCA_964106545.1American minkNeogale visonMammals Laurasiatheria
396GCA_964194185.1lesser horseshoe batRhinolophus hipposiderosMammals Laurasiatheria
397GCF_036169615.1tourmaline sunangelHeliangelus exortisBirds Other
398GCF_015220805.1red-fronted tinkerbirdPogoniulus pusillusBirds Landbirds
399GCA_039878825.1king quailCoturnix chinensisBirds Other
400GCF_009829155.1stoutMustela ermineaMammals Laurasiatheria
401GCA_964106825.2red foxVulpes vulpesMammals Laurasiatheria
402GCA_043727835.1Stoliczka's trident batAselliscus stoliczkanusMammals Laurasiatheria
403GCF_048164855.1Mexican gray wolfCanis lupusMammals Laurasiatheria
404GCF_937001465.1killer whaleOrcinus orcaMammals Laurasiatheria
405GCF_039906515.1false killer whalePseudorca crassidensMammals Laurasiatheria
406GCA_005190385.3narwhalMonodon monocerosMammals Laurasiatheria
407GCF_028023285.1Rice's whaleBalaenoptera riceiMammals Laurasiatheria
408GCF_902686445.1grey squirrelSciurus carolinensis Mammals Euarchontoglires
409GCA_043880285.1Cyclops roundleaf batDoryrhina cyclopsMammals Laurasiatheria
410GCA_036417435.1Amazon river dolphinInia geoffrensisMammals Laurasiatheria
411GCA_964270905.1Atlantic white-sided dolphinLagenorhynchus acutusMammals Laurasiatheria
412GCA_037157525.1Alvarez's mastiff batMolossus alvarezi Mammals Laurasiatheria
413GCA_043748575.1Northern woolly horseshoe batRhinolophus perniger lanosusMammals Laurasiatheria
414GCF_003369695.1Brahman cowBos taurusMammals Laurasiatheria
415GCA_902686455.2Eurasian red squirrelSciurus vulgarisMammals Euarchontoglires
416GCA_023851605.1Southern tamandua Tamandua tetradactylaMammals Other
417GCA_039880945.1Ebon mastiff batMolossus nigricansMammals Laurasiatheria
418GCA_043880425.1Yong hoi sen's woolly horseshoe batRhinolophus yonghoiseniMammals Laurasiatheria
419GCA_037893015.1greater bilbyMacrotis lagotisMammals Other
420GCF_963924675.1harbor porpoisePhocoena phocoenaMammals Laurasiatheria
421GCA_964374135.1Risso's dolphinGrampus griseusMammals Laurasiatheria
422GCF_008692025.1vaquitaPhocoena sinusMammals Laurasiatheria
423GCA_964146895.2Schreibers' long-fingered batMiniopterus schreibersiiMammals Laurasiatheria
424GCA_964165515.1Sowerby's beaked whaleMesoplodon bidensMammals Laurasiatheria
425GCF_014176215.1Egyptian rousetteRousettus aegyptiacusMammals Laurasiatheria
426GCF_963455315.2long-finned pilot whaleGlobicephala melasMammals Laurasiatheria
427GCF_949774975.1white-beaked dolphinLagenorhynchus albirostrisMammals Laurasiatheria
428GCF_011762595.1common bottlenose dolphinTursiops truncatusMammals Laurasiatheria
429GCA_964341445.1True's beaked whaleMesoplodon mirusMammals Laurasiatheria
430GCA_949752795.1North Atlantic bottlenose whaleHyperoodon ampullatusMammals Laurasiatheria
431GCF_030020395.1Chinese pangolinManis pentadactylaMammals Laurasiatheria
432GCF_949987515.2saddleback dolphinDelphinus delphisMammals Laurasiatheria
433GCA_951394435.1striped dolphinStenella coeruleoalbaMammals Laurasiatheria
434GCF_020740795.1common swiftApus apusBirds Other
435GCA_039655065.1Merriam's long-tongued batGlossophaga muticaMammals Laurasiatheria
436GCF_014108415.1Pallas's mastiff batMolossus molossusMammals Laurasiatheria
437GCF_036850765.1greater sac-winged batSaccopteryx bilineataMammals Laurasiatheria
438GCA_964662115.1least weasel Mustela nivalis vulgarisMammals Laurasiatheria
439GCF_027579445.1Nelson's sparrowAmmospiza nelsoniBirds Landbirds
440GCF_030445035.2nine-banded armadilloDasypus novemcinctusMammals Other
441GCF_036850995.1lesser sac-winged batSaccopteryx lepturaMammals Laurasiatheria
442GCF_027406575.1sunda slow lorisNycticebus coucangMammals Euarchontoglires
443GCA_903797595.2European robinErithacus rubeculaBirds Landbirds
444GCF_015220235.1Linnaeus's two-toed slothCholoepus didactylusMammals Other
445GCF_004115215.2platypusOrnithorhynchus anatinusMammals Other
446GCF_025265405.1Blainville's beaked whaleMesoplodon densirostrisMammals Laurasiatheria
447GCA_043880595.1Lesser false vampire batMegaderma spasmaMammals Laurasiatheria
448GCA_038363095.2great fruit-eating batArtibeus lituratusMammals Laurasiatheria
449GCF_026419965.1pygmy sperm whaleKogia brevicepsMammals Laurasiatheria
450GCF_030684315.1zebra sharkStegostoma tigrinumFishes Other
451GCA_022682495.2common vampire batDesmodus rotundusMammals Laurasiatheria
452GCA_947247035.1Hungarian meadow viperVipera ursiniiReptiles
453GCA_043290085.1black and rufous elephant shrewRhynchocyon petersiMammals Other
454GCF_007474595.2Canada lynxLynx canadensisMammals Laurasiatheria
455GCF_004126475.2pale spear-nosed batPhyllostomus discolorMammals Laurasiatheria
456GCA_037038545.1proboscis batRhynchonycteris nasoMammals Laurasiatheria
457GCF_003957555.1Anna's hummingbirdCalypte annaBirds Other
458GCA_028451465.1North American porcupineErethizon dorsatumMammals Euarchontoglires
459GCA_046129695.1Bengalese finchLonchura striata domesticaBirds Landbirds
460GCF_036321535.1Dromedary camelCamelus dromedariusMammals Laurasiatheria
461GCA_964194105.1European ground squirrelSpermophilus citellusMammals Euarchontoglires
462GCF_009819655.1European blackcapSylvia atricapillaBirds Landbirds
463GCF_027574615.1big brown batEptesicus fuscusMammals Laurasiatheria
464GCA_964094495.2whiskered batMyotis mystacinusMammals Laurasiatheria
465GCA_964212035.2Natterer's batMyotis nattereriMammals Laurasiatheria
466GCF_963259705.1Daubenton's batMyotis daubentoniiMammals Laurasiatheria
467GCF_964237555.1European rabbitOryctolagus cuniculusMammals Euarchontoglires
468GCA_038363145.1intermediate fruit-eating batArtibeus intermediusMammals Laurasiatheria
469GCA_043728145.1trefoil horseshoe batRhinolophus trifoliatusMammals Laurasiatheria
470GCF_020740605.2ring-tailed lemurLemur cattaMammals Euarchontoglires
471GCF_015852505.1short-beaked echidnaTachyglossus aculeatusMammals Other
472GCF_028018845.1swamp sparrowMelospiza georgianaBirds Landbirds
473GCF_014108235.1greater mouse-eared batMyotis myotisMammals Laurasiatheria
474GCA_951640355.1northern batEptesicus nilssonii Mammals Laurasiatheria
475GCA_047511655.1North American beaverCastor canadensisMammals Euarchontoglires
476GCA_963455305.1brown big-eared batPlecotus auritusMammals Laurasiatheria
477GCF_902713615.1small-spotted catsharkScyliorhinus caniculaFishes Other
478GCF_009764475.1smalltooth sawfishPristis pectinataFishes Other
479GCF_047511675.1yellow bellied marmotMarmota flaviventrisMammals Euarchontoglires
480GCF_015227805.1barn swallowHirundo rusticaBirds Landbirds
481GCF_043159975.1pig-tailed macaqueMacaca nemestrinaMammals Euarchontoglires
482GCA_965115925.1Geoffroy's batMyotis emarginatusMammals Laurasiatheria
483GCA_048593235.1fat-tailed dunnartSminthopsis crassicaudataMammals Other
484GCA_964194135.1European moleTalpa europaeaMammals Laurasiatheria
485GCA_026230055.1Townsend's big-eared batCorynorhinus townsendiiMammals Laurasiatheria
486GCA_963383645.1common dormouseMuscardinus avellanariusMammals Euarchontoglires
487GCA_043748645.1Angolan free-tailed batMops condylurusMammals Laurasiatheria
488GCF_035770615.1song sparrowMelospiza melodiaBirds Landbirds
489GCA_048772815.1golden-mantled ground squirrelCallospermophilus lateralisMammals Euarchontoglires
490GCA_045843805.1Arctic ground squirrelUrocitellus parryiiMammals Euarchontoglires
491GCA_027563665.1pallid batAntrozous pallidusMammals Laurasiatheria
492GCA_964264875.2lesser noctuleNyctalus leisleriMammals Laurasiatheria
493GCF_020740685.1Lesser Egyptian jerboaJaculus jaculusMammals Euarchontoglires
494GCF_036971445.1lesser electric rayNarcine bancroftiiFishes Other
495GCA_963924515.1particolored batVespertilio murinusMammals Laurasiatheria
496GCA_048771875.1common gundiCtenodactylus gundiMammals Euarchontoglires
497GCA_901699155.2European turtle doveStreptopelia turturBirds Other
498GCA_949987585.1soprano pipistrellePipistrellus pygmaeusMammals Laurasiatheria
499GCF_903992535.2European water voleArvicola amphibiusMammals Euarchontoglires
500GCA_964271855.1Crete spiny mouseAcomys minousMammals Euarchontoglires
501GCF_950005125.1European snow voleChionomys nivalisMammals Euarchontoglires
502GCF_030435755.1American pikaOchotona princepsMammals Euarchontoglires
503GCF_014108245.1Kuhl's pipistrellePipistrellus kuhliiMammals Laurasiatheria
504GCA_037038515.1Eastern meadow voleMicrotus pennsylvanicusMammals Euarchontoglires
505GCF_015227675.2Norway ratRattus norvegicusMammals Euarchontoglires
506GCF_903995435.1golden spiny mouseAcomys russatusMammals Euarchontoglires
507GCF_027887155.1diamondback terrapinMalaclemys terrapinReptiles
508GCF_947179515.1European woodmouseApodemus sylvaticusMammals Euarchontoglires
509GCA_011762505.3Nile ratArvicanthis niloticusMammals Euarchontoglires
510GCA_964656225.1Nathusius's pipistrellePipistrellus nathusiiMammals Laurasiatheria
511mm39mouseMus musculusMammals Euarchontoglires
512GCA_048593285.1tiger quollDasyurus maculatusMammals Other
513GCA_949316315.1house mouseMus musculusMammals Euarchontoglires
514GCA_964273705.1barred grass snakeNatrix helveticaReptiles
515GCA_048593225.1Tasmanian devilSarcophilus harrisiiMammals Other
516GCA_963514005.1blonde rayRaja brachyuraFishes Other
517GCF_903995425.1Southern grasshopper mouseOnychomys torridusMammals Euarchontoglires
518GCF_010909765.2thorny skateAmblyraja radiataFishes Other
519GCA_964339955.1Hanaki's dwarf batPipistrellus hanakiMammals Laurasiatheria
520GCA_026229955.1North American deer mousePeromyscus maniculatus sonoriensisMammals Euarchontoglires
521GCA_046562885.1jaguarPanthera oncaMammals Laurasiatheria
522GCF_030028105.1Atlantic manta rayMobula birostrisFishes Other
523GCA_009764595.1common yellowthroatGeothlypis trichasBirds Landbirds
524GCF_031021105.1royal ground snakeErythrolamprus reginaeReptiles
525GCA_033349115.1Suwannee snapping turtleMacrochelys suwanniensisReptiles
526GCF_030144855.1Atlantic stingrayHypanus sabinusFishes Other
527GCF_950295315.1European hedgehogErinaceus europaeusMammals Laurasiatheria
528GCA_017639485.1European golden ploverPluvialis apricariaBirds Waterbirds
529GCA_031878675.1Botta's pocket gopherThomomys bottaeMammals Euarchontoglires
530GCA_035084275.1spotted ratfishHydrolagus collieiFishes Other
531GCF_009769535.1Western terrestrial garter snakeThamnophis elegansReptiles
532GCF_027595985.1European shrewSorex araneusMammals Laurasiatheria
533GCA_963924665.1European harvest mouseMicromys minutusMammals Euarchontoglires
534GCF_024139225.1Etruscan shrewSuncus etruscusMammals Laurasiatheria
535GCA_903992545.1common pipistrellePipistrellus pipistrellusMammals Laurasiatheria
536GCA_901765095.2tiny cayenne caecilianMicrocaecilia unicolorAmphibians
537GCA_040206685.1coastal tailed frogAscaphus trueiAmphibians
538GCF_902459505.1Gaboon caecilianGeotrypetes seraphiniAmphibians
539GCF_027358695.1plain spadefoot toadSpea bombifronsAmphibians
540GCA_027410445.1painted frogDiscoglossus pictusAmphibians
541GCF_027789765.1hourglass treefrogDendropsophus ebraccatusAmphibians
542GCA_038501925.1Peter's clawed frogXenopus petersiiAmphibians
543GCF_035609145.1coquiEleutherodactylus coquiAmphibians
544GCF_905171765.1European toadBufo bufoAmphibians
545GCA_031893055.1rufous frogLeptodactylus fuscusAmphibians
546GCF_040894005.1tungara frogEngystomops pustulosusAmphibians
547GCF_029499605.1Sardinian treefrogHyla sardaAmphibians
548GCA_038048845.1Fleay's barred frogMixophyes fleayiAmphibians
549GCA_027917425.1Eastern narrow-mouthed toadGastrophryne carolinensisAmphibians
550GCF_040937935.1Riggenbach's reed frogHyperolius riggenbachiAmphibians
551GCA_048565345.1golden mantellaMantella aurantiacaAmphibians
552GCF_032444005.1mimic poison frogRanitomeya imitatorAmphibians
553GCF_905171775.1European common frogRana temporariaAmphibians
554GCF_036172605.1common spadefoot toadPelobates fuscusAmphibians
555GCA_965119305.1pool frogPelophylax lessonaeAmphibians
556GCF_028390025.1Southern corroboree frogPseudophryne corroboreeAmphibians
557GCA_048569485.1Edward's Rocket FrogAnomaloglossus baeobatrachusAmphibians
558GCA_036172795.1Iberian parsley frogPelodytes ibericusAmphibians
559GCF_027579735.1European fire-bellied toadBombina bombinaAmphibians
560GCA_964205295.1yellow-bellied toadBombina variegataAmphibians
561GCA_037306005.1Mexican burrowing toadRhinophrynus dorsalisAmphibians
562GCA_048934315.1sea lampreyPetromyzon marinusFishes Other
563GCA_019207075.1belcher's lanceletBranchiostoma belcheriInvertebrates
564GCA_964198595.1European river lampreyLampetra fluviatilisFishes Other
565GCA_015852565.1Florida amphioxusBranchiostoma floridaeInvertebrates
566GCA_035083965.1European lanceletBranchiostoma lanceolatumInvertebrates
567GCA_964187855.1Atlantic hagfishMyxine glutinosaFishes Other
568GCA_040954625.2tongue acorn wormBalanoglossus misakiensisInvertebrates
569GCF_902459465.1common starfishAsterias rubensInvertebrates
570GCA_947561715.1pink sea squirtAscidia mentulaInvertebrates
571GCA_963924565.1European sea squirtAscidiella aspersaInvertebrates
572GCA_963082875.1Orange-tipped sea squirtCorella eumyotaInvertebrates
573GCA_947623445.1light-bulb sea squirtClavelina lepadiformisInvertebrates
574GCA_964204865.1tunicate S.clavaStyela clavaInvertebrates
575GCA_918807975.1clonial sea squirtAplidium turbinatumInvertebrates
576GCA_963675345.1Trididemnum clinidesTrididemnum clinidesInvertebrates
577GCA_965202585.1Thalia democraticaThalia democraticaInvertebrates

Table 1. Genome assemblies included in the VGP 577-way alignment.

References

Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature. 2021 Apr 29;592(7856):737-746. DOI: 10.1038/s41586-021-03451-0; PMID: 33911273; PMC: PMC8081667

Paten B, Earl D, Nguyen N, Diekhans M, Zerbino D, Haussler D. Cactus: Algorithms for genome multiple sequence alignment. Genome Biol. 2011 Jun 24;12(6):R63. DOI: 10.1186/gb-2011-12-6-r63; PMID: 21703006; PMC: PMC3218810