Description

This track shows a multiple alignment of 577 vertebrate genomes made with Cactus. This alignment represents the largest and most taxonomically diverse vertebrate alignment to date, spanning mammals, birds, fishes, reptiles, and amphibians from the Vertebrate Genomes Project (VGP) and related sequencing initiatives.

All alignments were performed using the Cactus toolkit, which uses a reference-free approach to construct genome alignments and ancestral reconstructions. Unlike traditional progressive alignment methods, Cactus simultaneously considers all input genomes to minimize reference bias and improve alignment accuracy across diverse evolutionary distances.

The alignment includes:

This broad phylogenetic sampling enables comparative genomics studies across the vertebrate tree of life, supporting research in evolution, conservation, and functional genomics.

Data Access

Downloads for data in this track are available from the directories:

Display Conventions and Configuration

Pairwise alignments of each species to the reference genome are displayed as a grayscale density plot (in pack mode) or as a wiggle (in full mode) that indicates alignment quality. In dense display mode, alignments are shown in grayscale using darker values to indicate higher levels of coverage.

Checkboxes on the track configuration page allow selection of the species to include in the pairwise display. Note that excluding species from the pairwise display does not alter the underlying alignment data.

To view detailed information about the alignments at a specific position, zoom the display in to 30,000 or fewer bases, then click on the alignment.

Gap Annotation

The Display chains between alignments configuration option enables display of gaps between alignment blocks in the pairwise alignments in a manner similar to the Chain track display. Missing sequence in any assembly is highlighted in the track display by regions of yellow when zoomed out and by Ns when displayed at base level. The following conventions are used:

Genomic Breaks

Discontinuities in the genomic context (chromosome, scaffold or region) of the aligned DNA in the aligning species are shown as follows:

Base Level

When zoomed-in to the base-level display, the track shows the base composition of each alignment. The numbers and symbols on the Gaps line indicate the lengths of gaps in the reference sequence at those alignment positions relative to the longest non-reference sequence. If there is sufficient space in the display, the size of the gap is shown. If the space is insufficient and the gap size is a multiple of 3, a "*" is displayed; other gap sizes are indicated by "+".

Methods

The VGP 577-way alignment was created using the Cactus multiple genome alignment tool. Cactus employs a reference-free progressive alignment strategy that constructs a series of pairwise alignments organized according to a guide tree, then uses these to build progressively larger alignments up to the full multiple alignment.

Unlike traditional progressive alignment approaches, Cactus performs an additional "bar" phase that identifies and resolves alignment conflicts by considering all genomes simultaneously. This helps reduce reference bias and improves accuracy across diverse evolutionary distances present in vertebrate genomes.

The input genomes represent high-quality chromosome-level assemblies primarily from the Vertebrate Genomes Project, with additional assemblies from NCBI RefSeq and GenBank that meet quality standards for whole-genome alignment.

Sequences (click on header labels to sort by that column)

Default order is by similarity to the reference

count accession
(link to browser)
common
name
scientific name VGP grouping
001GCF_040954835.1spotted garLepisosteus oculatus
reference species
Fishes Ray Finned
002GCF_036373705.1bowfinAmia calvaFishes Ray Finned
003GCF_013368585.1Indo-pacific tarponMegalops cyprinoidesFishes Ray Finned
004GCF_902713425.1sterletAcipenser ruthenusFishes Ray Finned
005GCF_013347855.1European eelAnguilla anguillaFishes Ray Finned
006GCF_963514075.1European congerConger congerFishes Ray Finned
007GCF_900964775.1golden arowanaScleropages formosusFishes Ray Finned
008GCA_951799395.1greater argentineArgentina silusFishes Ray Finned
009GCA_963989245.1pencil smeltNansenia antarcticaFishes Ray Finned
010GCA_964263955.1common whitefishCoregonus lavaretusFishes Ray Finned
011GCA_901001165.2brown troutSalmo truttaFishes Ray Finned
012GCF_011004845.1Northern pikeEsox luciusFishes Ray Finned
013GCF_902362185.1milkfishChanos chanosFishes Ray Finned
014GCA_949987555.1large-eye snaggletoothBorostomias antarcticusFishes Ray Finned
015GCA_036784965.1Arctic charSalvelinus alpinus oquassaFishes Ray Finned
016GCA_038355195.1rainbow smeltOsmerus mordaxFishes Ray Finned
017GCF_963692335.1European smeltOsmerus eperlanusFishes Ray Finned
018GCA_048544225.1Osbeck's grenadier anchovyCoilia mystusFishes Ray Finned
019GCA_963457725.1European spratSprattus sprattusFishes Ray Finned
020GCF_963854185.1sardineSardina pilchardusFishes Ray Finned
021GCA_048537225.1Bermuda beardfishPolymixia cf. hollisteraeFishes Ray Finned
022GCF_900700375.1denticle herringDenticeps clupeoidesFishes Ray Finned
023GCA_047511565.1beardfishPolymixia loweiFishes Ray Finned
024GCA_017639675.1peladillaAplochiton taeniatusFishes Ray Finned
025GCF_018492685.1American shadAlosa sapidissimaFishes Ray Finned
026GCA_048128805.1bight redfishCentroberyx gerrardiFishes Ray Finned
027GCF_902150065.1pinecone soldierfishMyripristis murdjanFishes Ray Finned
028GCA_041902795.1electric eelElectrophorus electricusFishes Ray Finned
029GCA_963921795.1Lantern fishNannobrachium achirusFishes Ray Finned
030GCA_936440315.1barbelBarbus barbusFishes Ray Finned
031GCA_048569125.1silver spinyfinDiretmus argenteusFishes Ray Finned
032GCF_030463535.1golden doradoSalminus brasiliensisFishes Ray Finned
033GCF_963082965.1common carpCarassius carassiusFishes Ray Finned
034GCA_963454915.1minispotted lanternfishGymnoscopelus microlampasFishes Ray Finned
035GCA_048301585.1Rhinogobio nasutusRhinogobio nasutusFishes Ray Finned
036GCF_015220715.1red-bellied piranhaPygocentrus nattereriFishes Ray Finned
037GCA_963280865.1Brauer's lanternfishGymnoscopelus braueriFishes Ray Finned
038GCF_023375975.1Mexican tetraAstyanax mexicanusFishes Ray Finned
039GCA_944039275.1zebrafishDanio rerioFishes Ray Finned
040GCA_949357685.1gudgeonGobio gobioFishes Ray Finned
041GCA_964638095.1crested bigscalePoromitra crassicepsFishes Ray Finned
042GCA_947034865.1stone loachBarbatula barbatulaFishes Ray Finned
043GCA_965113295.1common daceLeuciscus leuciscusFishes Ray Finned
044GCA_038024135.1blacktail shinerCyprinella venustaFishes Ray Finned
045GCA_963993115.1common breamAbramis bramaFishes Ray Finned
046GCA_951802725.1roach minnowRutilus rutilusFishes Ray Finned
047GCA_949319135.1European chubSqualius cephalusFishes Ray Finned
048GCA_042242135.1Australian herringArripis georgianaFishes Ray Finned
049GCA_964197995.1common ruddScardinius erythrophthalmusFishes Ray Finned
050GCA_949152265.1Eurasian minnowPhoxinus phoxinusFishes Ray Finned
051GCF_029633865.1smalleye Pacific opahLampris incognitusFishes Ray Finned
052GCF_963924715.1northern bluefin tunaThunnus thynnusFishes Ray Finned
053GCF_910596095.1southern bluefin tunaThunnus maccoyiiFishes Ray Finned
054GCF_914725855.1yellowfin tunaThunnus albacaresFishes Ray Finned
055GCF_043641665.1old wifeEnoplosus armatusFishes Ray Finned
056GCA_031216445.1Chinese sea bassLateolabrax maculatusFishes Ray Finned
057GCA_045363895.1sharptooth jobfishPristipomoides typusFishes Ray Finned
058GCF_042242105.1rough bullseyePempheris klunzingeriFishes Ray Finned
059GCF_017976425.1banded archerfishToxotes jaculatrixFishes Ray Finned
060GCA_048129235.1rankin codEpinephelus rankiniFishes Ray Finned
061GCA_963971535.1Antarctic jonasfishNotolepis coatsiFishes Ray Finned
062GCA_041903045.1giant grouperEpinephelus lanceolatusFishes Ray Finned
063GCA_048128725.1chinamanfishSymphorus nematophorusFishes Ray Finned
064GCA_048129055.1yellow and blueback fusilierCaesio teresFishes Ray Finned
065GCA_019677235.1large-mouth bassMicropterus salmoidesFishes Ray Finned
066GCF_017976325.1copperband butterflyfishChelmon rostratusFishes Ray Finned
067GCF_039877785.1chevron butterflyfishChaetodon trifascialisFishes Ray Finned
068GCA_963924005.1Bolin’s lanternfishProtomyctophum boliniFishes Ray Finned
069GCA_965226575.1common seabreamPagrus pagrusFishes Ray Finned
070GCA_951216825.1Antarctic lanternfishElectrona antarcticaFishes Ray Finned
071GCA_045362495.1spangled emperorLethrinus nebulosusFishes Ray Finned
072GCF_029633855.1trahiraHoplias malabaricusFishes Ray Finned
073GCF_020382885.2spotted scatScatophagus argusFishes Ray Finned
074GCA_963691815.1lesser weeverEchiichthys viperaFishes Ray Finned
075GCA_043250625.1Acadian redfishSebastes fasciatusFishes Ray Finned
076GCF_015220745.1honeycomb rockfishSebastes umbrosusFishes Ray Finned
077GCF_963691925.1Atlantic mackerelScomber scombrusFishes Ray Finned
078GCA_041753875.1black porgyAcanthopagrus schlegeliiFishes Ray Finned
079GCF_904848185.1yellowfin sea breamAcanthopagrus latusFishes Ray Finned
080GCF_027409825.1Pacific chub mackerelScomber japonicusFishes Ray Finned
081GCA_905171665.2Atlantic horse mackerelTrachurus trachurusFishes Ray Finned
082GCF_900880675.1gilthead seabreamSparus aurataFishes Ray Finned
083GCA_964188405.1parallel lanternfishProtomyctophum parallelum Fishes Ray Finned
084GCA_910591455.2rock gunnelPholis gunnellusFishes Ray Finned
085GCF_900324485.2zig-zag eelMastacembelus armatusFishes Ray Finned
086GCF_900324465.2climbing perchAnabas testudineusFishes Ray Finned
087GCF_009819705.1Atlantic halibutHippoglossus hippoglossusFishes Ray Finned
088GCA_960531495.1John doryZeus faberFishes Ray Finned
089GCA_963514085.1thicklip grey mulletChelon labrosusFishes Ray Finned
090GCF_027358585.1striped catfishPangasianodon hypophthalmusFishes Ray Finned
091GCA_963514095.1grey gurnardEutrigla gurnardusFishes Ray Finned
092GCF_963584025.1cuckoo wrasseLabrus mixtusFishes Ray Finned
093GCA_020745685.1cunnerTautogolabrus adspersusFishes Ray Finned
094GCA_963854745.1turbotScophthalmus maximusFishes Ray Finned
095GCA_964266715.1lemon soleMicrostomus kittFishes Ray Finned
096GCF_900963305.1live sharksuckerEcheneis naucratesFishes Ray Finned
097GCF_963930695.1ballan wrasseLabrus bergyltaFishes Ray Finned
098GCA_047301625.1blackspot tuskfishChoerodon schoenleiniiFishes Ray Finned
099GCA_910589615.1long-spined sea scorpionTaurulus bubalisFishes Ray Finned
100GCF_963576545.1common dabLimanda limandaFishes Ray Finned
101GCA_028022725.1blackbelly eelpoutLycodopsis pacificusFishes Ray Finned
102GCF_902148855.1orbiculate cardinalfishSphaeramia orbicularisFishes Ray Finned
103GCF_900634625.1Indian glassy fishParambassis rangaFishes Ray Finned
104GCA_949987685.1lesseer sand eelAmmodytes marinusFishes Ray Finned
105GCF_949316205.1European flounderPlatichthys flesusFishes Ray Finned
106GCF_007364275.1flier cichlidArchocentrus centrarchusFishes Ray Finned
107GCA_949748355.1limp eelpoutMelanostigma gelatinosumFishes Ray Finned
108GCA_946808225.1Aristotle's catfishSilurus aristotelisFishes Ray Finned
109GCA_949357725.1greater sand eelHyperoplus immaculatusFishes Ray Finned
110GCF_009762535.1New Zealand spotty wrasseNotolabrus celidotusFishes Ray Finned
111GCF_900634415.1channel bull blennyCottoperca gobioFishes Ray Finned
112GCA_965226115.1flavescent peacock cichlidAulonocara stuartgrantiFishes Ray Finned
113GCA_964374335.1Eastern happyAstatotilapia callipteraFishes Ray Finned
114GCA_963969265.1Chilingali cichlidRhamphochromis chilingaliFishes Ray Finned
115GCA_024256435.1North African catfishClarias gariepinusFishes Ray Finned
116GCF_947347685.1European plaicePleuronectes platessaFishes Ray Finned
117GCA_048301465.1West Atlantic trumpetfishAulostomus maculatusFishes Ray Finned
118GCA_046255685.1Northern cavefishAmblyopsis spelaeaFishes Ray Finned
119GCF_009769545.1lumpfishCyclopterus lumpusFishes Ray Finned
120GCF_958295425.1common soleSolea soleaFishes Ray Finned
121GCA_947650265.1corkwing wrasseSymphodus melopsFishes Ray Finned
122GCA_049190665.1arrowtailMelanonus zugmayeriFishes Ray Finned
123GCA_949606895.1marbled rockcodNotothenia rossii Fishes Ray Finned
124GCF_030014385.1Rosablanca cavefishTrichomycterus rosablancaFishes Ray Finned
125GCA_963457635.1thickback soleMicrochirus variegatusFishes Ray Finned
126GCA_049082185.1crested weedfishCristiceps australisFishes Ray Finned
127GCA_964276395.1three-spined sticklebackGasterosteus aculeatusFishes Ray Finned
128GCF_902148845.1jewelled blennySalarias fasciatusFishes Ray Finned
129GCF_900634795.4Siamese fighting fishBetta splendensFishes Ray Finned
130GCA_963383615.1shannyLipophrys pholisFishes Ray Finned
131GCF_017639745.1Boeseman’s rainbowfishMelanotaenia boesemaniFishes Ray Finned
132GCF_902500255.1prehistoric monster fishThalassophryne amazonicaFishes Ray Finned
133GCA_027942865.1pejerreyOdontesthes bonariensisFishes Ray Finned
134GCF_027579695.1blue salmon catfishNeoarius graeffeiFishes Ray Finned
135GCA_933228915.1telmatherina bontiTelmatherina bontiFishes Ray Finned
136GCA_014839995.1needlefishXenentodon cancilaFishes Ray Finned
137GCA_014839685.1largescale four-eyesAnableps anablepsFishes Ray Finned
138GCA_020510985.1convict blennyPholidichthys leucotaeniaFishes Ray Finned
139GCA_963422515.1butterfly blennyBlennius ocellarisFishes Ray Finned
140GCF_949316345.1ninespine sticklebackPungitius pungitiusFishes Ray Finned
141GCA_048126635.1sea sticklebackSpinachia spinachiaFishes Ray Finned
142GCA_013358685.1warty frogfishAntennarius maculatusFishes Ray Finned
143GCF_021462225.1darkedged splitfinGirardinichthys multiradiatusFishes Ray Finned
144GCA_037039145.1banded killifishFundulus diaphanusFishes Ray Finned
145GCA_949987615.1European pollockPollachius pollachiusFishes Ray Finned
146GCA_048628825.1Atlantic silversideMenidia menidiaFishes Ray Finned
147GCF_900747795.2reedfishErpetoichthys calabaricusFishes Ray Finned
148GCF_902167405.1Atlantic codGadus morhuaFishes Ray Finned
149GCF_900634775.1blunt-snouted clingfishGouania willdenowiFishes Ray Finned
150GCF_901000725.2Japanese puffer (torafugu)Takifugu rubripesFishes Ray Finned
151GCA_951799975.1black gobyGobius nigerFishes Ray Finned
152GCF_009829125.3Korean giant-fin mudskipperPeriophthalmus magnuspinnatusFishes Ray Finned
153GCA_044231665.1ocellated dragonetNeosynchiropus ocellatusFishes Ray Finned
154GCA_044231675.1picturesque dragonetSynchiropus picturatusFishes Ray Finned
155GCA_964030765.1blue whitingMicromesistius poutassouFishes Ray Finned
156GCF_901709675.1greater pipefishSyngnathus acusFishes Ray Finned
157GCA_048301445.1broad-nosed pipefishSyngnathus typhleFishes Ray Finned
158GCF_037176945.1African coelacanthLatimeria chalumnaeFishes Other
159GCA_040894355.2Bellinger river turtleMyuchelys georgesiReptiles
160GCA_965152275.1Australian flatback sea turtleNatator depressusReptiles
161GCF_015237465.2green sea turtleChelonia mydasReptiles
162GCA_965140235.1loggerhead sea turtleCaretta carettaReptiles
163GCF_025201925.1Mexican gopher tortoiseGopherus flavomarginatusReptiles
164GCA_965140285.1Kemp's ridley sea turtleLepidochelys kempiiReptiles
165GCA_965140295.1Pacific ridleyLepidochelys olivaceaReptiles
166GCF_007399415.2Goode's Thornscrub TortoiseGopherus evgoodeiReptiles
167GCF_028017835.1European pond turtleEmys orbicularisReptiles
168GCA_965152235.1Hawksbill sea turtleEretmochelys imbricataReptiles
169GCF_009764565.3leatherback sea turtleDermochelys coriaceaReptiles
170GCA_045781085.1Indian roofed turtlePangshura tectaReptiles
171GCA_045364815.1arrau turtlePodocnemis expansaReptiles
172GCA_033958435.1pig-nosed turtleCarettochelys insculptaReptiles
173GCA_030020295.1Indian gharialGavialis gangeticusReptiles
174GCF_030867095.1American alligatorAlligator mississippiensisReptiles
175GCF_040807025.1common ostrichStruthio camelus australisBirds Other
176GCA_032164245.1eastern musk turtleSternotherus odoratusReptiles
177GCF_036370855.1emuDromaius novaehollandiaeBirds Other
178GCF_036417845.1North Island brown kiwiApteryx mantelliBirds Other
179GCA_037962945.1king vultureSarcoramphus papaBirds Landbirds
180GCA_028022735.1bearded vultureGypaetus barbatusBirds Landbirds
181GCF_028389875.1lesser rhea Rhea pennataBirds Other
182GCA_964188355.1common buzzardButeo buteoBirds Landbirds
183GCF_900496995.4European golden eagleAquila chrysaetosBirds Landbirds
184GCF_929443795.1Northern goshawkAccipiter gentilisBirds Landbirds
185GCF_026419915.1harpy eagleHarpia harpyjaBirds Landbirds
186GCA_021292165.1Chinese crocodile lizardShinisaurus crocodilurusReptiles
187GCF_947461875.1white-tailed eagleHaliaeetus albicillaBirds Landbirds
188GCA_045345515.1crested eagleMorphnus guianensisBirds Landbirds
189GCA_965140245.1little owlAthene noctuaBirds Landbirds
190GCA_964195595.2Cory's shearwaterCalonectris borealisBirds Waterbirds
191GCA_965151615.1tundra swanCygnus columbianusBirds Other
192GCA_965231335.1Canada gooseBranta canadensisBirds Other
193GCF_028858705.1whooping craneGrus americanaBirds Waterbirds
194GCA_964106855.1Eurasian craneGrus grusBirds Waterbirds
195GCA_964211825.1common pochardAythya ferinaBirds Other
196GCA_031877795.1tawny owlStrix alucoBirds Landbirds
197GCF_040182565.1swan gooseAnser cygnoidesBirds Other
198GCA_964188345.1mallardAnas platyrhynchosBirds Other
199GCA_965183815.1Eurasian spoonbillPlatalea leucorodiaBirds Waterbirds
200GCA_011004875.1grey crowned-craneBalearica regulorum gibbericepsBirds Waterbirds
201GCA_963989345.1long-tailed duckClangula hyemalisBirds Other
202GCA_964199755.1yellow-legged gullLarus michahellisBirds Waterbirds
203GCA_963932225.1lesser black-backed gullLarus fuscusBirds Waterbirds
204GCA_009819825.1red-legged seriemaCariama cristataBirds Landbirds
205GCF_963924245.1black-headed gullChroicocephalus ridibundusBirds Waterbirds
206GCA_009819775.1American flamingoPhoenicopterus ruberBirds Other
207GCF_030936135.1red-throated LoonGavia stellataBirds Waterbirds
208GCA_964188175.1Italian wall lizardPodarcis siculusReptiles
209GCF_028583425.1leopard geckoEublepharis maculariusReptiles
210GCA_964059595.1common goldeneyeBucephala clangulaBirds Other
211GCA_964211835.1domestic gooseAnser anserBirds Other
212GCF_036013445.1Nicobar pigeonCaloenas nicobaricaBirds Other
213GCA_964417175.1herring gullLarus argentatusBirds Waterbirds
214GCF_023053635.1Southern alligator lizardElgaria multicarinata webbiiReptiles
215GCA_964188315.1common wall lizardPodarcis muralisReptiles
216GCF_029931775.1European leaf-toed geckoEuleptes europaeaReptiles
217GCF_027172205.1Aeolian wall lizardPodarcis raffoneiReptiles
218GCA_965140915.1greater scaupAythya marilaBirds Other
219GCA_964034855.1pink-footed gooseAnser brachyrhynchusBirds Other
220GCA_964270895.1Filfola wall lizardPodarcis filfolensisReptiles
221GCA_965153285.1Tyrrhenian wall lizardPodarcis tiliguertaReptiles
222GCA_030463565.1dalmatian pelicanPelecanus crispusBirds Waterbirds
223GCA_027474245.1Humboldt penguinSpheniscus humboldtiBirds Waterbirds
224GCA_964106915.2Skyros wall lizardPodarcis gaigeaeReptiles
225GCF_028500815.1black-legged kittiwakeRissa tridactylaBirds Waterbirds
226GCA_964035555.1red-crested pochardNetta rufinaBirds Other
227GCF_030035675.1Florida worm lizardRhineura floridanaReptiles
228GCA_964106895.1Eurasian curlewNumenius arquataBirds Waterbirds
229GCA_029215775.1San Diegan legless lizardAnniella stebbinsiReptiles
230GCA_031468815.1Northern gannetMorus bassanusBirds Waterbirds
231GCA_009819605.1common ternSterna hirundoBirds Waterbirds
232GCA_964234715.1Dalmatian wall lizardPodarcis melisellensisReptiles
233GCA_965112155.1Columbretes wall lizardPodarcis liolepisReptiles
234GCA_965113315.1Andalusian wall lizardPodarcis vaucheriReptiles
235GCA_017639555.1Maguari storkCiconia maguariBirds Waterbirds
236GCF_037038585.1band-tailed pigeonPatagioenas fasciataBirds Other
237GCA_907165065.1Eurasian nightjarCaprimulgus europaeusBirds Other
238GCA_034619465.1cuckoo-rollerLeptosomus discolorBirds Landbirds
239GCF_963921805.1great cormorantPhalacrocorax carboBirds Waterbirds
240GCA_964106645.2Ibiza wall lizardPodarcis pityusensisReptiles
241GCF_013368605.1great potooNyctibius grandisBirds Other
242GCA_020745775.1plumbeous ibisTheristicus caerulescensBirds Waterbirds
243GCF_963932015.1northern pintailAnas acutaBirds Other
244GCA_965231255.1Northern LapwingVanellus vanellusBirds Waterbirds
245GCA_951804945.1Cretan wall lizardPodarcis cretensisReptiles
246GCF_009769625.2mute swanCygnus olorBirds Other
247GCA_036417535.1MacQueen's bustardChlamydotis macqueeniiBirds Other
248GCF_017639655.2lesser kestrelFalco naumanniBirds Landbirds
249GCF_009819795.1tufted duckAythya fuligulaBirds Other
250GCA_963210335.1Mauritius kestrelFalco punctatusBirds Landbirds
251GCA_949628215.1European shagGulosus aristotelisBirds Waterbirds
252GCF_015220075.1gyrfalconFalco rusticolusBirds Landbirds
253GCF_023634155.1peregrine falconFalco peregrinusBirds Landbirds
254GCA_030867145.1hoatzinOpisthocomus hoazinBirds Waterbirds
255GCA_008658365.1razorbillAlca TordaBirds Waterbirds
256GCA_028020825.1tawny frogmouthPodargus strigoidesBirds Other
257GCA_964237585.1common moorhenGallinula chloropusBirds Waterbirds
258GCA_027574665.1KaguRhynochetos jubatusBirds Waterbirds
259GCF_009819535.1sand lizardLacerta agilisReptiles
260GCF_017976375.1common cuckooCuculus canorusBirds Other
261GCF_023634085.1saker falconFalco cherrugBirds Landbirds
262GCA_964273445.1Eurasian collared-doveStreptopelia decaoctoBirds Other
263GCF_004027225.2kakapoStrigops habroptilusBirds Landbirds
264GCA_039906565.1mountain owlet-nightjarAegotheles albertisiBirds Other
265GCA_047922985.1elegant crested tinamouEudromia elegansBirds Other
266GCF_036013475.1rock doveColumba liviaBirds Other
267GCA_963082525.1pink pigeonNesoenas mayeriBirds Other
268GCA_009769605.1Abyssinian ground hornbillBucorvus abyssinicusBirds Landbirds
269GCF_963506605.1European common lizardZootoca viviparaReptiles
270GCA_036873955.1Brazilian merganserMergus octosetaceusBirds Other
271GCA_963264785.1Mauritius parakeetPsittacula echoBirds Landbirds
272GCF_023638135.1Lanner falconFalco biarmicusBirds Landbirds
273GCA_020746105.1surucua trogonTrogon surrucuraBirds Landbirds
274GCA_009769465.1red-crested turacoTauraco erythrolophusBirds Other
275GCA_020800305.1takahePorphyrio hochstetteriBirds Waterbirds
276GCA_964289735.1red-billed tropicbirdPhaethon aethereusBirds Waterbirds
277GCA_045345405.1golden parakeetGuaruba guarubaBirds Landbirds
278GCA_039720435.1yellow-crowned amazonAmazona ochrocephala Birds Landbirds
279GCA_009819595.1carmine bee-eaterMerops nubicusBirds Landbirds
280GCA_009769525.1yellow-throated sandgrousePterocles gutturalisBirds Other
281GCF_036365525.1horn sharkHeterodontus francisciFishes Other
282GCA_028858755.1blue-and-gold macawAra araraunaBirds Landbirds
283GCA_965178545.1Western jackdawColoeus monedulaBirds Landbirds
284GCF_012275295.1budgerigarMelopsittacus undulatusBirds Landbirds
285GCF_016700215.2white leghorn layer chickenGallus gallusBirds Other
286GCF_037157495.1swift parrotLathamus discolorBirds Landbirds
287GCA_046126795.1Smith's blind skinkDibamus smithiReptiles
288GCA_046129655.1blue jayCyanocitta cristataBirds Landbirds
289GCA_964188305.1Bocage's wall lizardPodarcis bocageiReptiles
290GCA_020745705.1whiskered treeswiftHemiprocne comataBirds Other
291GCA_045364795.1Xingu scale-backed antbirdWillisornis viduaBirds Landbirds
292GCF_020740725.1Hawaiian crowCorvus hawaiiensisBirds Landbirds
293GCF_028858725.1speckled mousebirdColius striatusBirds Landbirds
294GCF_026979565.1village indigobirdVidua chalybeataBirds Landbirds
295GCF_009650955.1New Caledonian crowCorvus moneduloidesBirds Landbirds
296GCF_009829145.1lanced-tailed manakinChiroxiphia lanceolataBirds Landbirds
297GCF_035084215.1sharpnose sevengill sharkHeptranchias perloFishes Other
298GCF_030490865.1black-capped chickadeePoecile atricapillusBirds Landbirds
299GCF_023343835.1rock ptarmiganLagopus mutaBirds Other
300GCA_035046505.1blue-tongue skinkTiliqua scincoidesReptiles
301GCA_033349115.1Suwannee snapping turtleMacrochelys suwanniensisReptiles
302GCF_036250125.1white-crowned manakinDixiphia pipraBirds Landbirds
303GCA_014706295.1Obi paradise-crowLycocorax pyrrhopterus obiensisBirds Landbirds
304GCA_963513975.1common chaffinchFringilla coelebsBirds Landbirds
305GCA_016904835.1riflemanAcanthisitta chlorisBirds Other
306GCF_963662255.1white-throated dipperCinclus cinclusBirds Landbirds
307GCA_951394365.1Western capercaillieTetrao urogallusBirds Other
308GCA_048771995.1zebra finchTaeniopygia guttataBirds Landbirds
309GCA_965231275.1silver-eyeZosterops lateralisBirds Landbirds
310GCA_964252035.1Aegean wall lizardPodarcis erhardiiReptiles
311GCA_031885435.1Savannah sparrowPasserculus sandwichensisBirds Landbirds
312GCA_036010785.1seaside sparrowAmmospiza maritimaBirds Landbirds
313GCF_036417665.1house sparrowPasser domesticusBirds Landbirds
314GCF_027887145.1saltmarsh sparrowAmmodramus caudacutusBirds Landbirds
315GCA_023637945.2long-tailed hermitPhaethornis superciliosusBirds Other
316GCF_020745825.1red-winged blackbirdAgelaius phoeniceusBirds Landbirds
317GCF_019393635.1monito del montesDromiciops gliroidesMammals Other
318GCF_020740795.1common swiftApus apusBirds Other
319GCF_009819885.2Swainson's thrushCatharus ustulatusBirds Landbirds
320GCF_901001135.1two-lined caecilianRhinatrema bivittatumAmphibians
321GCA_047830755.1white-throated sparrowZonotrichia albicollisBirds Landbirds
322GCA_027559615.1common mynaAcridotheres tristisBirds Landbirds
323GCA_964194155.1basking sharkCetorhinus maximusFishes Other
324GCF_036169615.1tourmaline sunangelHeliangelus exortisBirds Other
325GCF_017639515.1great white sharkCarcharodon carchariasFishes Other
326GCF_027477595.1house finchHaemorhous mexicanusBirds Landbirds
327GCA_003287225.2koalaPhascolarctos cinereusMammals Other
328GCF_044704955.1Japanese sawsharkPristiophorus japonicusFishes Other
329GCF_027887155.1diamondback terrapinMalaclemys terrapinReptiles
330GCF_029582105.1eastern black-eared wheatearOenanthe melanoleucaBirds Landbirds
331GCA_039878825.1king quailCoturnix chinensisBirds Other
332GCF_014839835.1downy woodpeckerDryobates pubescensBirds Landbirds
333GCA_014839755.1garden warblerSylvia borinBirds Landbirds
334GCA_030412105.1stout iguanaCyclura pinguisReptiles
335GCF_003957555.1Anna's hummingbirdCalypte annaBirds Other
336GCF_027579445.1Nelson's sparrowAmmospiza nelsoniBirds Landbirds
337GCF_028372415.1Tammar wallabyMacropus eugeniiMammals Other
338GCA_030867105.1olive pythonLiasis olivaceusReptiles
339GCA_901699155.2European turtle doveStreptopelia turturBirds Other
340GCF_011100635.1common brushtail possumTrichosurus vulpeculaMammals Other
341GCA_903797595.2European robinErithacus rubeculaBirds Landbirds
342GCA_046129695.1Bengalese finchLonchura striata domesticaBirds Landbirds
343GCF_028018845.1swamp sparrowMelospiza georgianaBirds Landbirds
344GCF_015220805.1red-fronted tinkerbirdPogoniulus pusillusBirds Landbirds
345GCF_027887165.1gray short-tailed opossumMonodelphis domesticaMammals Other
346GCF_035149785.1viper boaCandoia asperaReptiles
347GCF_009819655.1European blackcapSylvia atricapillaBirds Landbirds
348GCA_023333525.2Western whiptail stejnegeriAspidoscelis tigris stejnegeriReptiles
349GCF_020826845.1Southern black rhinocerosDiceros bicornis minorMammals Laurasiatheria
350GCA_031878705.1Malayan tapirTapirus indicusMammals Laurasiatheria
351GCF_015227805.1barn swallowHirundo rusticaBirds Landbirds
352GCF_004115215.2platypusOrnithorhynchus anatinusMammals Other
353GCA_036426135.1Arabian horseEquus caballusMammals Laurasiatheria
354GCA_046562895.1Amazon manateeTrichechus inunguisMammals Other
355GCF_015852505.1short-beaked echidnaTachyglossus aculeatusMammals Other
356GCA_030035585.1dugongDugong dugonMammals Other
357GCA_048126345.1marsupial moleNotoryctes typhlopsMammals Other
358GCF_024166365.1Asian elephantElephas maximus indicusMammals Other
359GCF_030014295.1African elephantLoxodonta africanaMammals Other
360GCA_030440675.1panther chameleonFurcifer pardalisReptiles
361GCF_035770615.1song sparrowMelospiza melodiaBirds Landbirds
362GCA_964213995.1starry smooth-hound sharkMustelus asteriasFishes Other
363GCF_027409185.1Philippine flying lemurCynocephalus volansMammals Euarchontoglires
364GCF_028885655.2Sumatran orangutanPongo abelii Mammals Euarchontoglires
365GCF_028885625.2Bornean orangutanPongo pygmaeusMammals Euarchontoglires
366GCF_037993035.1crab-eating macaqueMacaca fascicularisMammals Euarchontoglires
367GCA_043880545.1Greater mouse-tailed batRhinopoma microphyllumMammals Laurasiatheria
368GCF_029281585.2gorillaGorilla gorillaMammals Euarchontoglires
369GCF_028878055.3siamang gibbonSymphalangus syndactylusMammals Euarchontoglires
370GCF_028858775.2chimpanzeePan troglodytesMammals Euarchontoglires
371hs1humanHomo sapiensMammals Euarchontoglires
372hg38humanHomo sapiensMammals Euarchontoglires
373GCF_029289425.2bonoboPan paniscusMammals Euarchontoglires
374GCA_047715975.1lizards B.pumilumBradypodion pumilumReptiles
375GCF_009762305.2California sea lionZalophus californianusMammals Laurasiatheria
376GCF_028564815.1North Atlantic right whaleEubalaena glacialisMammals Laurasiatheria
377GCF_028018385.1clouded leopardNeofelis nebulosaMammals Laurasiatheria
378GCF_030028045.1common hippopotamusHippopotamus amphibiusMammals Laurasiatheria
379GCA_043728065.1intermediate horseshoe batRhinolophus affinisMammals Laurasiatheria
380GCF_028021215.1gray whaleEschrichtius robustusMammals Laurasiatheria
381GCF_004115265.2greater horseshoe batRhinolophus ferrumequinumMammals Laurasiatheria
382GCA_964656455.1grey sealHalichoerus grypusMammals Laurasiatheria
383GCA_048338725.1pigSus scrofaMammals Laurasiatheria
384GCA_041834305.1humpback whaleMegaptera novaeangliaeMammals Laurasiatheria
385GCF_922984935.1European badgerMeles melesMammals Laurasiatheria
386GCA_963455335.1European pine martenMartes martesMammals Laurasiatheria
387GCA_031876335.1intermediate roundleaf batHipposideros larvatusMammals Laurasiatheria
388GCA_048565385.1Bolivian squirrel monkeySaimiri boliviensisMammals Euarchontoglires
389GCF_009873245.2blue whaleBalaenoptera musculusMammals Laurasiatheria
390GCA_965194805.1sei whaleBalaenoptera borealisMammals Laurasiatheria
391GCF_949987535.1common minke whaleBalaenoptera acutorostrataMammals Laurasiatheria
392GCA_965194825.1finback whaleBalaenoptera physalusMammals Laurasiatheria
393GCA_049354715.1common marmosetCallithrix jacchusMammals Euarchontoglires
394GCF_030445035.2nine-banded armadilloDasypus novemcinctusMammals Other
395GCF_028023285.1Rice's whaleBalaenoptera riceiMammals Laurasiatheria
396GCA_037893015.1greater bilbyMacrotis lagotisMammals Other
397GCA_964194185.1lesser horseshoe batRhinolophus hipposiderosMammals Laurasiatheria
398GCF_015220235.1Linnaeus's two-toed slothCholoepus didactylusMammals Other
399GCA_040955705.1African hunting dogLycaon pictusMammals Laurasiatheria
400GCA_905319855.2gray wolfCanis lupusMammals Laurasiatheria
401GCF_011100685.1dogCanis lupus familiarisMammals Laurasiatheria
402GCF_009829155.1stoutMustela ermineaMammals Laurasiatheria
403GCF_030435805.1European minkMustela lutreolaMammals Laurasiatheria
404GCF_937001465.1killer whaleOrcinus orcaMammals Laurasiatheria
405GCA_005190385.3narwhalMonodon monocerosMammals Laurasiatheria
406GCF_902655055.1Eurasian otterLutra lutraMammals Laurasiatheria
407GCF_039906515.1false killer whalePseudorca crassidensMammals Laurasiatheria
408GCA_964270905.1Atlantic white-sided dolphinLagenorhynchus acutusMammals Laurasiatheria
409GCA_026018925.1large tree shrewTupaia tanaMammals Euarchontoglires
410GCA_036417435.1Amazon river dolphinInia geoffrensisMammals Laurasiatheria
411GCA_023851605.1Southern tamandua Tamandua tetradactylaMammals Other
412GCF_910594005.1red deerCervus elaphusMammals Laurasiatheria
413GCA_964106545.1American minkNeogale visonMammals Laurasiatheria
414GCA_964165515.1Sowerby's beaked whaleMesoplodon bidensMammals Laurasiatheria
415GCA_048126745.1fallow deerDama damaMammals Laurasiatheria
416GCA_043727835.1Stoliczka's trident batAselliscus stoliczkanusMammals Laurasiatheria
417GCA_964374135.1Risso's dolphinGrampus griseusMammals Laurasiatheria
418GCF_963924675.1harbor porpoisePhocoena phocoenaMammals Laurasiatheria
419GCF_008692025.1vaquitaPhocoena sinusMammals Laurasiatheria
420GCF_949774975.1white-beaked dolphinLagenorhynchus albirostrisMammals Laurasiatheria
421GCA_964341445.1True's beaked whaleMesoplodon mirusMammals Laurasiatheria
422GCA_949752795.1North Atlantic bottlenose whaleHyperoodon ampullatusMammals Laurasiatheria
423GCF_011762595.1common bottlenose dolphinTursiops truncatusMammals Laurasiatheria
424GCF_963455315.2long-finned pilot whaleGlobicephala melasMammals Laurasiatheria
425GCA_043748575.1Northern woolly horseshoe batRhinolophus perniger lanosusMammals Laurasiatheria
426GCF_949987515.2saddleback dolphinDelphinus delphisMammals Laurasiatheria
427GCA_951394435.1striped dolphinStenella coeruleoalbaMammals Laurasiatheria
428GCF_963930625.1Reeves' muntjacMuntiacus reevesiMammals Laurasiatheria
429GCA_043880425.1Yong hoi sen's woolly horseshoe batRhinolophus yonghoiseniMammals Laurasiatheria
430GCF_037176765.1brown anoleAnolis sagreiReptiles
431GCF_048164855.1Mexican gray wolfCanis lupusMammals Laurasiatheria
432GCF_020745735.1epaulette sharkHemiscyllium ocellatumFishes Other
433GCA_964106825.2red foxVulpes vulpesMammals Laurasiatheria
434GCA_041735815.1goatCapra hircusMammals Laurasiatheria
435GCA_040805955.1domestic sheepOvis ariesMammals Laurasiatheria
436GCF_025265405.1Blainville's beaked whaleMesoplodon densirostrisMammals Laurasiatheria
437GCF_042477335.2bighorn sheepOvis canadensisMammals Laurasiatheria
438GCF_030020395.1Chinese pangolinManis pentadactylaMammals Laurasiatheria
439GCA_964662115.1least weasel Mustela nivalis vulgarisMammals Laurasiatheria
440GCA_043880285.1Cyclops roundleaf batDoryrhina cyclopsMammals Laurasiatheria
441GCA_028571685.1yellow-spotted rock hyraxHeterohyrax bruceiMammals Other
442GCA_017639485.1European golden ploverPluvialis apricariaBirds Waterbirds
443GCA_030848825.1Brazilian free-tailed batTadarida brasiliensisMammals Laurasiatheria
444GCF_003369695.1Brahman cowBos taurusMammals Laurasiatheria
445GCF_026419965.1pygmy sperm whaleKogia brevicepsMammals Laurasiatheria
446GCF_014176215.1Egyptian rousetteRousettus aegyptiacusMammals Laurasiatheria
447GCF_902686445.1grey squirrelSciurus carolinensis Mammals Euarchontoglires
448GCF_007474595.2Canada lynxLynx canadensisMammals Laurasiatheria
449GCA_902686455.2Eurasian red squirrelSciurus vulgarisMammals Euarchontoglires
450GCA_048593235.1fat-tailed dunnartSminthopsis crassicaudataMammals Other
451GCF_036321535.1Dromedary camelCamelus dromedariusMammals Laurasiatheria
452GCF_020740605.2ring-tailed lemurLemur cattaMammals Euarchontoglires
453GCA_037157525.1Alvarez's mastiff batMolossus alvarezi Mammals Laurasiatheria
454GCA_043728145.1trefoil horseshoe batRhinolophus trifoliatusMammals Laurasiatheria
455GCA_039880945.1Ebon mastiff batMolossus nigricansMammals Laurasiatheria
456GCF_043159975.1pig-tailed macaqueMacaca nemestrinaMammals Euarchontoglires
457GCA_009764595.1common yellowthroatGeothlypis trichasBirds Landbirds
458GCF_027406575.1sunda slow lorisNycticebus coucangMammals Euarchontoglires
459GCF_902713615.1small-spotted catsharkScyliorhinus caniculaFishes Other
460GCA_964146895.2Schreibers' long-fingered batMiniopterus schreibersiiMammals Laurasiatheria
461GCF_036850765.1greater sac-winged batSaccopteryx bilineataMammals Laurasiatheria
462GCA_039655065.1Merriam's long-tongued batGlossophaga muticaMammals Laurasiatheria
463GCF_014108415.1Pallas's mastiff batMolossus molossusMammals Laurasiatheria
464GCF_036850995.1lesser sac-winged batSaccopteryx lepturaMammals Laurasiatheria
465GCA_964194105.1European ground squirrelSpermophilus citellusMammals Euarchontoglires
466GCF_009764475.1smalltooth sawfishPristis pectinataFishes Other
467GCF_030684315.1zebra sharkStegostoma tigrinumFishes Other
468GCA_035084275.1spotted ratfishHydrolagus collieiFishes Other
469GCA_022682495.2common vampire batDesmodus rotundusMammals Laurasiatheria
470GCA_037038545.1proboscis batRhynchonycteris nasoMammals Laurasiatheria
471GCA_043880595.1Lesser false vampire batMegaderma spasmaMammals Laurasiatheria
472GCA_038363095.2great fruit-eating batArtibeus lituratusMammals Laurasiatheria
473GCF_004126475.2pale spear-nosed batPhyllostomus discolorMammals Laurasiatheria
474GCA_028451465.1North American porcupineErethizon dorsatumMammals Euarchontoglires
475GCA_964094495.2whiskered batMyotis mystacinusMammals Laurasiatheria
476GCF_027574615.1big brown batEptesicus fuscusMammals Laurasiatheria
477GCF_047511675.1yellow bellied marmotMarmota flaviventrisMammals Euarchontoglires
478GCF_964237555.1European rabbitOryctolagus cuniculusMammals Euarchontoglires
479GCF_963259705.1Daubenton's batMyotis daubentoniiMammals Laurasiatheria
480GCA_043290085.1black and rufous elephant shrewRhynchocyon petersiMammals Other
481GCA_024294585.1snub-nosed viberVipera latasteiReptiles
482GCA_964212035.2Natterer's batMyotis nattereriMammals Laurasiatheria
483GCA_951640355.1northern batEptesicus nilssonii Mammals Laurasiatheria
484GCA_038363145.1intermediate fruit-eating batArtibeus intermediusMammals Laurasiatheria
485GCF_014108235.1greater mouse-eared batMyotis myotisMammals Laurasiatheria
486GCA_047511655.1North American beaverCastor canadensisMammals Euarchontoglires
487GCA_963455305.1brown big-eared batPlecotus auritusMammals Laurasiatheria
488GCA_048772815.1golden-mantled ground squirrelCallospermophilus lateralisMammals Euarchontoglires
489GCA_043748645.1Angolan free-tailed batMops condylurusMammals Laurasiatheria
490GCA_965115925.1Geoffroy's batMyotis emarginatusMammals Laurasiatheria
491GCA_964194135.1European moleTalpa europaeaMammals Laurasiatheria
492GCA_048593285.1tiger quollDasyurus maculatusMammals Other
493GCA_964194415.1adderVipera berusReptiles
494GCA_045843805.1Arctic ground squirrelUrocitellus parryiiMammals Euarchontoglires
495GCA_026230055.1Townsend's big-eared batCorynorhinus townsendiiMammals Laurasiatheria
496GCA_963383645.1common dormouseMuscardinus avellanariusMammals Euarchontoglires
497GCA_048593225.1Tasmanian devilSarcophilus harrisiiMammals Other
498GCA_947247035.1Hungarian meadow viperVipera ursiniiReptiles
499GCA_027563665.1pallid batAntrozous pallidusMammals Laurasiatheria
500GCA_964264875.2lesser noctuleNyctalus leisleriMammals Laurasiatheria
501GCA_949987585.1soprano pipistrellePipistrellus pygmaeusMammals Laurasiatheria
502GCA_963924515.1particolored batVespertilio murinusMammals Laurasiatheria
503GCA_046562885.1jaguarPanthera oncaMammals Laurasiatheria
504GCF_014108245.1Kuhl's pipistrellePipistrellus kuhliiMammals Laurasiatheria
505GCF_036971445.1lesser electric rayNarcine bancroftiiFishes Other
506GCA_048771875.1common gundiCtenodactylus gundiMammals Euarchontoglires
507GCF_020740685.1Lesser Egyptian jerboaJaculus jaculusMammals Euarchontoglires
508GCA_964656225.1Nathusius's pipistrellePipistrellus nathusiiMammals Laurasiatheria
509GCF_030435755.1American pikaOchotona princepsMammals Euarchontoglires
510GCA_963514005.1blonde rayRaja brachyuraFishes Other
511GCA_964339955.1Hanaki's dwarf batPipistrellus hanakiMammals Laurasiatheria
512GCA_964271855.1Crete spiny mouseAcomys minousMammals Euarchontoglires
513GCF_010909765.2thorny skateAmblyraja radiataFishes Other
514GCF_903992535.2European water voleArvicola amphibiusMammals Euarchontoglires
515GCF_950005125.1European snow voleChionomys nivalisMammals Euarchontoglires
516GCA_037038515.1Eastern meadow voleMicrotus pennsylvanicusMammals Euarchontoglires
517GCF_903995435.1golden spiny mouseAcomys russatusMammals Euarchontoglires
518GCA_011762505.3Nile ratArvicanthis niloticusMammals Euarchontoglires
519GCF_030028105.1Atlantic manta rayMobula birostrisFishes Other
520GCF_015227675.2Norway ratRattus norvegicusMammals Euarchontoglires
521GCF_947179515.1European woodmouseApodemus sylvaticusMammals Euarchontoglires
522mm39mouseMus musculusMammals Euarchontoglires
523GCF_030144855.1Atlantic stingrayHypanus sabinusFishes Other
524GCA_949316315.1house mouseMus musculusMammals Euarchontoglires
525GCA_964273705.1barred grass snakeNatrix helveticaReptiles
526GCF_903995425.1Southern grasshopper mouseOnychomys torridusMammals Euarchontoglires
527GCA_026229955.1North American deer mousePeromyscus maniculatus sonoriensisMammals Euarchontoglires
528GCA_901765095.2tiny cayenne caecilianMicrocaecilia unicolorAmphibians
529GCA_031878675.1Botta's pocket gopherThomomys bottaeMammals Euarchontoglires
530GCF_031021105.1royal ground snakeErythrolamprus reginaeReptiles
531GCF_950295315.1European hedgehogErinaceus europaeusMammals Laurasiatheria
532GCF_009769535.1Western terrestrial garter snakeThamnophis elegansReptiles
533GCF_027595985.1European shrewSorex araneusMammals Laurasiatheria
534GCA_903992545.1common pipistrellePipistrellus pipistrellusMammals Laurasiatheria
535GCA_040206685.1coastal tailed frogAscaphus trueiAmphibians
536GCF_902459505.1Gaboon caecilianGeotrypetes seraphiniAmphibians
537GCA_963924665.1European harvest mouseMicromys minutusMammals Euarchontoglires
538GCF_024139225.1Etruscan shrewSuncus etruscusMammals Laurasiatheria
539GCF_027358695.1plain spadefoot toadSpea bombifronsAmphibians
540GCA_027410445.1painted frogDiscoglossus pictusAmphibians
541GCA_038501925.1Peter's clawed frogXenopus petersiiAmphibians
542GCF_027789765.1hourglass treefrogDendropsophus ebraccatusAmphibians
543GCF_035609145.1coquiEleutherodactylus coquiAmphibians
544GCF_905171765.1European toadBufo bufoAmphibians
545GCA_031893055.1rufous frogLeptodactylus fuscusAmphibians
546GCF_040894005.1tungara frogEngystomops pustulosusAmphibians
547GCF_029499605.1Sardinian treefrogHyla sardaAmphibians
548GCA_038048845.1Fleay's barred frogMixophyes fleayiAmphibians
549GCA_027917425.1Eastern narrow-mouthed toadGastrophryne carolinensisAmphibians
550GCF_040937935.1Riggenbach's reed frogHyperolius riggenbachiAmphibians
551GCA_048565345.1golden mantellaMantella aurantiacaAmphibians
552GCF_036172605.1common spadefoot toadPelobates fuscusAmphibians
553GCF_028390025.1Southern corroboree frogPseudophryne corroboreeAmphibians
554GCF_032444005.1mimic poison frogRanitomeya imitatorAmphibians
555GCF_905171775.1European common frogRana temporariaAmphibians
556GCA_965119305.1pool frogPelophylax lessonaeAmphibians
557GCA_048569485.1Edward's Rocket FrogAnomaloglossus baeobatrachusAmphibians
558GCA_036172795.1Iberian parsley frogPelodytes ibericusAmphibians
559GCA_037306005.1Mexican burrowing toadRhinophrynus dorsalisAmphibians
560GCF_027579735.1European fire-bellied toadBombina bombinaAmphibians
561GCA_964205295.1yellow-bellied toadBombina variegataAmphibians
562GCA_019207075.1belcher's lanceletBranchiostoma belcheriInvertebrates
563GCA_035083965.1European lanceletBranchiostoma lanceolatumInvertebrates
564GCA_015852565.1Florida amphioxusBranchiostoma floridaeInvertebrates
565GCA_048934315.1sea lampreyPetromyzon marinusFishes Other
566GCA_964198595.1European river lampreyLampetra fluviatilisFishes Other
567GCA_964187855.1Atlantic hagfishMyxine glutinosaFishes Other
568GCA_040954625.2tongue acorn wormBalanoglossus misakiensisInvertebrates
569GCF_902459465.1common starfishAsterias rubensInvertebrates
570GCA_947561715.1pink sea squirtAscidia mentulaInvertebrates
571GCA_963924565.1European sea squirtAscidiella aspersaInvertebrates
572GCA_963082875.1Orange-tipped sea squirtCorella eumyotaInvertebrates
573GCA_947623445.1light-bulb sea squirtClavelina lepadiformisInvertebrates
574GCA_964204865.1tunicate S.clavaStyela clavaInvertebrates
575GCA_918807975.1clonial sea squirtAplidium turbinatumInvertebrates
576GCA_963675345.1Trididemnum clinidesTrididemnum clinidesInvertebrates
577GCA_965202585.1Thalia democraticaThalia democraticaInvertebrates

Table 1. Genome assemblies included in the VGP 577-way alignment.

References

Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature. 2021 Apr 29;592(7856):737-746. DOI: 10.1038/s41586-021-03451-0; PMID: 33911273; PMC: PMC8081667

Paten B, Earl D, Nguyen N, Diekhans M, Zerbino D, Haussler D. Cactus: Algorithms for genome multiple sequence alignment. Genome Biol. 2011 Jun 24;12(6):R63. DOI: 10.1186/gb-2011-12-6-r63; PMID: 21703006; PMC: PMC3218810