##maf version=1 scoring=blastz
a score=0.000000
s GCF_015237465.2.NW_025111247.1            0 565 +     31630  
s GCA_965152275.1.OZ223944.1        128206013 565 - 132879417  
i GCA_965152275.1.OZ223944.1        N 0 I 1299
s GCA_965152235.1.OZ223887.1          5519596 565 + 134836623  
i GCA_965152235.1.OZ223887.1        N 0 N 0
s GCF_009764565.3.NC_050073.1         2838754 565 + 131128815  
i GCF_009764565.3.NC_050073.1       N 0 I 222
s GCA_965140235.1.OZ222813.1        130114229 564 - 133850159  
i GCA_965140235.1.OZ222813.1        N 0 I 5169
s GCA_965140285.1.OZ223564.1          3877118 565 + 135739771  
i GCA_965140285.1.OZ223564.1        N 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    508698   5 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 N 0 I 473
s GCA_965140295.1.OZ223117.1          2569914 565 + 131075015  
i GCA_965140295.1.OZ223117.1        N 0 C 0
s GCF_007399415.2.NC_044325.1       124917830   5 + 155918640  
i GCF_007399415.2.NC_044325.1       N 0 I 472
s GCF_025201925.1.NC_066621.1         3072560   5 + 162938067  
i GCF_025201925.1.NC_066621.1       N 0 I 472
s GCA_045781085.1.CM099110.1          2253345   5 + 145055026  
i GCA_045781085.1.CM099110.1        N 0 I 469

a score=0.000000
s GCF_015237465.2.NW_025111247.1          565 11 +     31630 cttttattgtt
s GCA_965152275.1.OZ223944.1          4539788 11 + 132879417 cttttattgtt
i GCA_965152275.1.OZ223944.1        n 1299 C 0
s GCA_965152235.1.OZ223887.1          3231155 11 + 134836623 CTTTTATtgtt
i GCA_965152235.1.OZ223887.1        N 0 I 4
s GCF_009764565.3.NC_050073.1         2839541 11 + 131128815 cttttattgtt
i GCF_009764565.3.NC_050073.1       I 222 C 0
s GCA_965140235.1.OZ222813.1          3513533 11 + 133850159 cttttattgtt
i GCA_965140235.1.OZ222813.1        n 5169 n 5169
s GCA_965140285.1.OZ223564.1          3877683 11 + 135739771 cttttattgtt
i GCA_965140285.1.OZ223564.1        C 0 I 4
s GCA_965140295.1.OZ223117.1          2570479 11 + 131075015 CTTTTATtgtt
i GCA_965140295.1.OZ223117.1        C 0 I 4
e GCA_045781085.1.CM099110.1          2253350 469 + 145055026 I
e GCF_025201925.1.NC_066621.1         3072565 472 + 162938067 I
e GCF_007399415.2.NC_044325.1       124917835 472 + 155918640 I
e GCA_033349115.1.JAVFKW010000008.1    508703 473 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1          576 38 +     31630 atgttttctctgtaatgcaccattgccagttgttgttg
s GCA_965152275.1.OZ223944.1          4539799 38 + 132879417 atgttttctctgtaatgcaccattgccagttgttgttg
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          3231170 34 + 134836623 ----tttctttgtaatgcacCATTGCCAGTTGTTGTTG
i GCA_965152235.1.OZ223887.1        I 4 C 0
s GCF_009764565.3.NC_050073.1         2839552 38 + 131128815 atgttttctctctaatccaCCATTGCCAGTTATTATTG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          7287862 34 + 133850159 ----tttctttgtaatgcaccattgccagttgttgttg
i GCA_965140235.1.OZ222813.1        n 5169 C 0
s GCA_965140285.1.OZ223564.1          3877698 34 + 135739771 ----tttctttgtaatgcaccaTTGCCAGTTGTTGTTG
i GCA_965140285.1.OZ223564.1        I 4 C 0
s GCA_965140295.1.OZ223117.1          2570494 34 + 131075015 ----tttctttgtaatgcacCATTGCCAGTTGTTGTTG
i GCA_965140295.1.OZ223117.1        I 4 C 0
e GCA_045781085.1.CM099110.1          2253350 469 + 145055026 I
e GCF_025201925.1.NC_066621.1         3072565 472 + 162938067 I
e GCF_007399415.2.NC_044325.1       124917835 472 + 155918640 I
e GCA_033349115.1.JAVFKW010000008.1    508703 473 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1          614 306 +     31630 ttgccagctaaagtgacaaaagataacattgcatttcaggcatggaaaataccgtaactcttcatttctttctgcatacctgaatggcacaagacaccagtgggcaaacttaactctgcattaacaaaggttt--ggg----------------aattgaatttaggccaaatttG----CAGCTAA--------ATATTGAGTGTGGAATTTTGGAACTGCCTAAATAAAAAGCACCCACTCCCTATTGTTTTTAGttggatatttaactcctaaa-accataatgctcttcaat-gcgactttcttttggaagctgtttgatcttggtttcagagg
s GCA_965152275.1.OZ223944.1          5055798 306 + 132879417 ttgccagctaaagtgagaaaagataacattgcgtttcaggcatggaaaataccttaactcttcatttctttctgcatacctgaatggcacaagacaccagtgggcaaacttaactctgcattaacaaaggttt--ggg----------------aatttaATTTAGGCCAAATTTG----CAGCTAA--------ATATTGAGTGTGGAATTTTGGAACTGCCTAAATAAAAAGCACCCACTCCCTATTGTTTTTAGTTGGATATTTAACTCCTAAA-ACCATAATGCTCTTCAAT-GCGACtttcttttggaagctgtttgatcttggttttagagg
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1          3231204 303 + 134836623 ---CCAGCTAAAGTGAGAAAAGATAACATTGCATTTCAGGCATGGAAAATATCTTAACTCTTCATTTCTTTCTGCATACTTGaatggcacaagacacgaatgggcaaacttaactctgcattaacaaaggttt--ggg----------------aattgaatttaggccaaatttg----cagctaa--------atattgagtgtggaattttggaactgcctaaataaaaagcacccactccctattgtttttagttggatatttaactcctaaa-accataatgctcttcaat-gcgactttcttttggaagctgtttgatcttggtttcagagg
i GCA_965152235.1.OZ223887.1        C 0 N 0
s GCF_009764565.3.NC_050073.1         2839590 282 + 131128815 ---CCAGCTAAAGTTAGAAAAGATAACATTACGTTTCAGACATGGAAAATACCCTAACTCTTCATTTCTTTCTGCATaccaga----------------------aactctaactctgcattaacaaaggttt--ggg----------------aatttaatttAGCCCAAATTTG----CAGCTAA--------ATATTGAGTGTTGAATTTTGGAACTGCCTAAATAAAGAGCACCCACTCCCTATTGTTTTTAGCTGGATATTTAACTCCTAA-AACCATAATGCTCTTCAATGGCGACTTTCTTTTGGAAGCTGTTTGATCTTGGTTTCAGAGG
i GCF_009764565.3.NC_050073.1       C 0 I 3656
s GCA_965140235.1.OZ222813.1          7287896 303 + 133850159 ---ccagctaaagtgagaaaagataacattgcatttcaggcatggaaaatatcttaactcttcatttctttctgcatacctgaatggcacaagacaccaatgggcaaacttaactctgcattaacaaaggttt--ggg----------------aattgaatttaggccaaatttg----cagctaa--------atattgagtgtggaattttggaacttcctaaataaaaagcgcccactccctattgtttttagttggatatttaactcctaaa-accataatgctcttcaat-gcgactttcttttggaagctgtttgatcttggtttcagagg
i GCA_965140235.1.OZ222813.1        C 0 n 0
s GCA_965140285.1.OZ223564.1          3877732 303 + 135739771 ---CCAGCTAAAGTGAGAAAAGATAACATTGCGTTTCAGGCATGGAAAATACCTTAACTCTTCATTTCTGTCTGCATACCTGAATGGCACAAGACACCAGTGGGCaaacttaactctgcattaacaaaGGTTT--GGG----------------AATTGAATTTAGGCCAAATTTG----CAGCTAA--------ATATTGCGTGTGGAATTTTGGAACTGCCTAAATAAAAAGCACCCACTCCCTATTGTTTTTAGTTGGATATTTAACTCCTAAA-ACCATAATGCTCTTCAGT-GCGACTTTCTTTTGGAAGCTGTTTGATcttggtttcagagg
i GCA_965140285.1.OZ223564.1        C 0 N 0
s GCA_965140295.1.OZ223117.1          2570528 303 + 131075015 ---CCAGCTAAAGTGAGAAAAGATAACATTGCGTTTCAGGCATGGAAAATACCTTAACTCTTCATTTCTGTCTGCATACCTGAATGGCACAAGACACCAGTGGGCaaacttaactctgcattaacaaaGGTTT--GGG----------------AATTGAATTTAGGCCAAATTTG----CAGCTAA--------ATATTGAGTGTGGAATTTTGGAACTGCCTAAATAAAAAGCACCCACTCCCTATTGTTTTTAGTTGGATATTTAACTCCTAAA-ACCATAATGCTCTTCAGT-GCGACTTTCTTTTGGAAGCTGTTTGATcttggtttcagagg
i GCA_965140295.1.OZ223117.1        C 0 I 917
e GCA_045781085.1.CM099110.1          2253350 469 + 145055026 I
e GCF_025201925.1.NC_066621.1         3072565 472 + 162938067 I
e GCF_007399415.2.NC_044325.1       124917835 472 + 155918640 I
e GCA_033349115.1.JAVFKW010000008.1    508703 473 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1          920 107 +     31630 ggtagccgtgttagtctgtgtcagc--aaaaacaatgaggagtcctgatagcacct-tagagactaataaatttatttgggcataagctgacaaagtagattccagccca
s GCA_965152275.1.OZ223944.1          4540140 107 + 132879417 agtagccgtgttagtctgtgtcagc--aaaaacaatgaggagtcctgatagcacct-tagagactaacaaatttatttgggcataagctgacaaagtagattccagccca
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1          5520500 107 + 134836623 ggtagccgtttaagtctgtgtcagc--aaaaacaatgaggagtcctgatatcacct-tagagactaacaaatttatttgggcataagctgacaaagtggattccaggcca
i GCA_965152235.1.OZ223887.1        N 0 N 0
s GCF_009764565.3.NC_050073.1         2843528 106 + 131128815 ggtggccatgttagtctgtatcagcAAaaaaaaaatgaggagtccttgtggcacct-tagagactaacaaatttatttgagcataagctttc---gtggactacaaccca
i GCF_009764565.3.NC_050073.1       I 3656 N 0
s GCA_965140235.1.OZ222813.1          3513885 107 + 133850159 ggtagccgtttaagtctgtgtcagc--aaaaccaatgaggagtcctgatatcacct-tagagactaacaaatttatttgggcataagctgacaaagtggattccaggcca
i GCA_965140235.1.OZ222813.1        n 0 n 0
s GCA_965140285.1.OZ223564.1          6384401 107 + 135739771 ggtagctgtttaagtctgtgtcagc--aaaaacaatgaggagtcctgatatcacct-tagagactaacaaatttatttgggcataagctgacaaagtggattccaggcca
i GCA_965140285.1.OZ223564.1        N 0 I 801
s GCA_965140295.1.OZ223117.1        128258953 108 - 131075015 ggtagccgtttCAGTCTGTGtcagc--gaaaacaatgaggagtcctgatatcacctCtagagactaacaaatttatttgggcataagctgacaaagtggattccaggcca
i GCA_965140295.1.OZ223117.1        n 917 C 0
e GCA_045781085.1.CM099110.1          2253350 469 + 145055026 I
e GCF_025201925.1.NC_066621.1         3072565 472 + 162938067 I
e GCF_007399415.2.NC_044325.1       124917835 472 + 155918640 I
e GCA_033349115.1.JAVFKW010000008.1    508703 473 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1027 806 +     31630  
s GCA_965152275.1.OZ223944.1          5056211 806 + 132879417  
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1          3231614 808 + 134836623  
i GCA_965152235.1.OZ223887.1        N 0 N 0
s GCF_009764565.3.NC_050073.1       128178520 807 - 131128815  
i GCF_009764565.3.NC_050073.1       N 0 C 0
s GCA_965140235.1.OZ222813.1          7288306 808 + 133850159  
i GCA_965140235.1.OZ222813.1        n 0 n 0
s GCA_965140285.1.OZ223564.1        131467269 808 - 135739771  
i GCA_965140285.1.OZ223564.1        n 801 I 31
s GCA_033349115.1.JAVFKW010000008.1    509176 805 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 I 473 T 12478
s GCA_965140295.1.OZ223117.1        128259061 808 - 131075015  
i GCA_965140295.1.OZ223117.1        C 0 I 221
s GCA_032164245.1.JAVMKO010000006.1   1909942 120 - 106994437  
i GCA_032164245.1.JAVMKO010000006.1 N 0 T 11552
s GCF_007399415.2.NC_044325.1       124918307 800 + 155918640  
i GCF_007399415.2.NC_044325.1       I 472 C 0
s GCF_025201925.1.NC_066621.1         3073037 804 + 162938067  
i GCF_025201925.1.NC_066621.1       I 472 N 0
s GCA_045781085.1.CM099110.1          2253819 797 + 145055026  
i GCA_045781085.1.CM099110.1        I 469 I 5
s GCF_027887155.1.NC_071508.1         3466035   4 + 154637676  
i GCF_027887155.1.NC_071508.1       N 0 C 0
s GCF_028017835.1.NC_088686.1         1928437   4 - 158421364  
i GCF_028017835.1.NC_088686.1       N 0 C 0
s GCA_033958435.1.CM066698.1          3477441   4 - 127301102  
i GCA_033958435.1.CM066698.1        N 0 C 0
s GCA_040894355.2.CM105055.1        111005100   7 + 311452600  
i GCA_040894355.2.CM105055.1        N 0 I 158
s GCA_045364815.1.CM098526.1        225913892   7 - 406759874  
i GCA_045364815.1.CM098526.1        N 0 I 138

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1833  5 +     31630 TC-TT-----------A
s GCA_965152275.1.OZ223944.1          4541053  5 + 132879417 TC-TT-----------A
i GCA_965152275.1.OZ223944.1        n 0 C 0
s GCA_965152235.1.OZ223887.1          5521416  5 + 134836623 tc-tt-----------a
i GCA_965152235.1.OZ223887.1        N 0 N 0
s GCF_009764565.3.NC_050073.1       128179327 16 - 131128815 tc-ttTAAAAAAAAATa
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3514801  5 + 133850159 ac-tt-----------a
i GCA_965140235.1.OZ222813.1        n 0 C 0
s GCA_965140285.1.OZ223564.1          6385309  5 + 135739771 tc-tt-----------a
i GCA_965140285.1.OZ223564.1        I 801 n 31
s GCA_033349115.1.JAVFKW010000008.1    497503  6 -   2470581 GA-TTT----------C
i GCA_033349115.1.JAVFKW010000008.1 T 12478 C 0
s GCA_965140295.1.OZ223117.1          2571748  5 + 131075015 ac-tt-----------a
i GCA_965140295.1.OZ223117.1        I 917 C 0
s GCA_032164245.1.JAVMKO010000006.1   1898510  5 - 106994437 GA-TT-----------C
i GCA_032164245.1.JAVMKO010000006.1 T 11552 C 0
s GCF_007399415.2.NC_044325.1       124919107 10 + 155918640 tc-ttTAAAA------a
i GCF_007399415.2.NC_044325.1       C 0 T 16020
s GCF_025201925.1.NC_066621.1        40822277 10 + 162938067 tc-ttTAAAA------a
i GCF_025201925.1.NC_066621.1       N 0 N 0
s GCA_045781085.1.CM099110.1          2254621  1 + 145055026 ----------------a
i GCA_045781085.1.CM099110.1        I 5 C 0
s GCF_027887155.1.NC_071508.1         3466039  6 + 154637676 GATTT-----------C
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1928441  6 - 158421364 GATTT-----------C
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3477445  6 - 127301102 GA-TTT----------C
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111005265  5 + 311452600 ta-tt-----------g
i GCA_040894355.2.CM105055.1        I 158 I 35
s GCA_045364815.1.CM098526.1        225914037  5 - 406759874 TG-AT-----------A
i GCA_045364815.1.CM098526.1        I 138 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1838 1 +     31630 A
s GCA_965152275.1.OZ223944.1          4541058 1 + 132879417 A
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3232427 1 + 134836623 a
i GCA_965152235.1.OZ223887.1        N 0 C 0
s GCF_009764565.3.NC_050073.1       128179343 1 - 131128815 a
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3514806 1 + 133850159 a
i GCA_965140235.1.OZ222813.1        C 0 I 4
s GCA_965140285.1.OZ223564.1          3878957 1 + 135739771 a
i GCA_965140285.1.OZ223564.1        n 31 C 0
s GCA_033349115.1.JAVFKW010000008.1    497509 1 -   2470581 A
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 12472
s GCA_965140295.1.OZ223117.1          2571753 1 + 131075015 a
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1   1898515 1 - 106994437 A
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 11546
s GCF_007399415.2.NC_044325.1       124903097 1 + 155918640 A
i GCF_007399415.2.NC_044325.1       T 16020 I 16025
s GCF_025201925.1.NC_066621.1         3054875 1 + 162938067 A
i GCF_025201925.1.NC_066621.1       N 0 I 18976
s GCA_045781085.1.CM099110.1          2254622 1 + 145055026 a
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3466045 1 + 154637676 A
i GCF_027887155.1.NC_071508.1       C 0 I 29110
s GCF_028017835.1.NC_088686.1         1928447 1 - 158421364 A
i GCF_028017835.1.NC_088686.1       C 0 I 22240
s GCA_033958435.1.CM066698.1          3477451 1 - 127301102 A
i GCA_033958435.1.CM066698.1        C 0 I 6759
s GCA_040894355.2.CM105055.1        111005305 1 + 311452600 a
i GCA_040894355.2.CM105055.1        I 35 C 0
s GCA_045364815.1.CM098526.1        225914042 1 - 406759874 A
i GCA_045364815.1.CM098526.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1839 5 +     31630 aaaca
s GCA_965152275.1.OZ223944.1          4541059 5 + 132879417 aaaca
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3232428 5 + 134836623 aaaca
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128179344 5 - 131128815 aaaca
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3514811 5 + 133850159 aaaca
i GCA_965140235.1.OZ222813.1        I 4 C 0
s GCA_965140285.1.OZ223564.1          3878958 5 + 135739771 aaaca
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_965140295.1.OZ223117.1          2571754 5 + 131075015 aaaca
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1         1416694 5 - 155918640 aaaaa
i GCF_007399415.2.NC_044325.1       n 16025 I 33
s GCF_025201925.1.NC_066621.1         3073852 5 + 162938067 aaaaa
i GCF_025201925.1.NC_066621.1       I 18976 I 32
s GCA_045781085.1.CM099110.1          2254623 5 + 145055026 aacaa
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3484211 5 - 127301102 gagac
i GCA_033958435.1.CM066698.1        I 6759 C 0
s GCA_040894355.2.CM105055.1        111005306 4 + 311452600 aata-
i GCA_040894355.2.CM105055.1        C 0 I 1327
s GCA_045364815.1.CM098526.1        225914043 4 - 406759874 ACCT-
i GCA_045364815.1.CM098526.1        C 0 I 12464
e GCF_028017835.1.NC_088686.1         1928448 22240 - 158421364 I
e GCF_027887155.1.NC_071508.1         3466046 29110 + 154637676 I
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I
e GCA_033349115.1.JAVFKW010000008.1    497510 12472 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1844 20 +     31630 a-----acaa--aca--aaaa---------------aa--------c------------c--caca
s GCA_965152275.1.OZ223944.1          4541064 20 + 132879417 a-----acaa--aca--aaaa---------------ac--------c------------c--caca
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          3232433 20 + 134836623 a-----acaa--aca--aaaa---------------at--------c------------c--caca
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128179349 25 - 131128815 aCAACAacaa--caa--caaa---------------aa--------c------------c--caca
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3514816 20 + 133850159 a-----acaa--aca--aaaa---------------at--------c------------c--caca
i GCA_965140235.1.OZ222813.1        C 0 n 0
s GCA_965140285.1.OZ223564.1          3878963 20 + 135739771 a-----acaa--aca--aaaa---------------at--------c------------c--caca
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_965140295.1.OZ223117.1          2571759 20 + 131075015 a-----acaa--aca--aaaa---------------at--------c------------c--caca
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       124919123 30 + 155918640 a-----tcaaCAaca--aaaa---------------aa--------cAA---AAAAAC-c--caca
i GCF_007399415.2.NC_044325.1       I 16025 I 435
s GCF_025201925.1.NC_066621.1       124825836 38 - 162938067 a-----tcaaCAaca--aaaa---------------aaAAACAAAAcAA---AAAAAC-C--CACA
i GCF_025201925.1.NC_066621.1       n 32 I 437
s GCA_045781085.1.CM099110.1          2254628 17 + 145055026 a-----acaaAAaca--acaa---------------aa--------c-------------------
i GCA_045781085.1.CM099110.1        C 0 I 8
s GCA_033958435.1.CM066698.1          3484216 31 - 127301102 g-----aata--aca--aaaaTGATGAAAGGTCTACaa--------a------------------a
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111006637 16 + 311452600 a-----acaa--aca--aaaa---------------aa--------a------------------a
i GCA_040894355.2.CM105055.1        I 1327 C 0
s GCA_045364815.1.CM098526.1        225926511 16 - 406759874 a-----acaa--aaa--acaa---------------aa--------a------------------a
i GCA_045364815.1.CM098526.1        I 12464 I 78
e GCF_028017835.1.NC_088686.1         1928448 22240 - 158421364 I
e GCF_027887155.1.NC_071508.1         3466046 29110 + 154637676 I
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I
e GCA_033349115.1.JAVFKW010000008.1    497510 12472 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         1864 190 +     31630 accaaac--aTTTGAAGGATTTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGCCTTGGATCAGGCCTGATCAGTAATTACTCTAGCGGAATCCATGTCAAATGG-CAAAAGACCATTTCCAAGAGACGTGTTGACTGGATTAAGGCCAG-G-CCCCATTGTGTGTCCAGCCAGGTCAGAGGCACAAA
s GCA_965152275.1.OZ223944.1        128207877 190 - 132879417 accaaac--aTTTGAAGGATTTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGCCTTGGATCAGGCCTGATCAGTAATTACTCTAGCGGAATCCATGTCAAATGG-CAAAAGACCATTTCCAAGAGACGTGTTGACTGGATTAAGGCCAG-G-CCCCATTGTGTGTCCAGCCAGGTCAGAGGCACAAA
i GCA_965152275.1.OZ223944.1        I 1299 I 506
s GCA_965152235.1.OZ223887.1          3232453 190 + 134836623 acCAAAC--ATTTGAAGGATTTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGCCTTGGATCAGGCCTGATCAGTAATTACTCCAACGGAATCCATGTCAAATGG-CAAATGACCATTTCCAAGAGACGTGTTGACTGGATTAAGGCCAG-G-CCCCATTGTGtgtccagccaggtcagaggcacaaa
i GCA_965152235.1.OZ223887.1        C 0 I 507
s GCF_009764565.3.NC_050073.1       128179374 188 - 131128815 accaaac--atttgaaggattTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGACTTGGATCAGGCCTGATCAGTAATTACTCTAGCGGAATCCATGTCACACG--CAAATGACCATTTCCAAGAGACATGTTGAGTGGATTAAGGCCAG-G-CCCCATTGTGTGTCCAGCCAGGTCAGAGGCACAA-
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          7289145 190 + 133850159 accaaac--atttgaaggatttaatcctaaaacttaaagaaagact-cacaa------------caacagcagccttggatcaggcctgatcagtaattactctagcggaatccatgtcaaatgg-caaacgaccatttccaagagacgtgttgactggattaaggccag-g-ccccattgtgtgtccagccaggtcagaggcacaaa
i GCA_965140235.1.OZ222813.1        n 0 n 0
s GCA_965140285.1.OZ223564.1        131468108 190 - 135739771 aCCAAAC--ATTAGAAGGATTTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGCCTTGGATCAGGCCTGATCAGTAATTACTCTAGCGGAATCCATGTCAAATGG-CAAATGATCATTTCCAAGAGACGTGTTGACTGGATTAAGTCCAG-G-CCCCATTGTGTGTCCAGCCAGGTCAGAGGCACAAA
i GCA_965140285.1.OZ223564.1        I 31 I 2111
s GCA_965140295.1.OZ223117.1          2571779 190 + 131075015 acCAAAC--ATTAGAAGGATTTAATCCTAAAACTTAAAGAAAGACT-CACAA------------CAACAGCAGCCTTGGATCAGGCCTGATCAGTAATTACTCTAGTGGAATCCATGTCAAATGG-CAAATGATCATTTCCAAGAGACGTGTTGACTGGATTAAGTCCAG-G-CCCCATTGTGTGTCCAGCCAGGTCAGAGGCACAAA
i GCA_965140295.1.OZ223117.1        C 0 I 507
s GCF_007399415.2.NC_044325.1         1416732 187 - 155918640 accaacc--gtttgaaggatttgatcctaagacttaaagaaagaat-cacaa------------caacagtggacttagatcaggcctgatcagtaattaccctagcagaatccatgtcacatg-Gcaaatgaccatttccaagagatgtgttgactggatgaaggccag-g-cccca--ttgtgtccagccaggtcagaggcacaa-
i GCF_007399415.2.NC_044325.1       I 33 I 938
s GCF_025201925.1.NC_066621.1         3073889 187 + 162938067 accaacc--gtttgaaggatttgatcctaagacTTAAAGAAAGAGT-CACAA------------CAACAGTGGACTTAGATCAGGCCTGATCAGTAATTACCCTAGCAGAATCCATGTCACATG-GCAAATGACCATTTCCAAGAGACgtgttgactggatgaaggccag-g-cccca--ttgtgtccagccaggtcagaggcataa-
i GCF_025201925.1.NC_066621.1       I 32 I 8873
s GCA_045781085.1.CM099110.1          2254653 187 + 145055026 --caacc--atTTGAAGGATTTAATCCTAAAACTAAAAGAGAGAAT-CACAA------------CAACAGCGGACATAGACCAGGACTGATCAGTAATTACCCTAGAGGAATCCATGTCACATG-GCAAATGACCATTTCCAAGAGACGTGTTGACTGGATGAAGGCCAG-G-CCTCATTGTGTGTCCAGCCAGGTCAGAGGCACAA-
i GCA_045781085.1.CM099110.1        I 8 I 12
s GCA_033958435.1.CM066698.1          3484247  71 - 127301102 catgaccTAatatgaaaaatgagattttctagtctgaaggagatgg-gacacATTGATAGTTTTcaaatata----------------------------------------------------------------------------------------------------------------------------------------
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111006653  53 + 311452600 accagtt--tcctgaa--ctttcattttctg--ttcacCAAAGAGA-AACAG------------CTAAAATG----------------------------------------------------------------------------------------------------------------------------------------
i GCA_040894355.2.CM105055.1        C 0 C 0
s GCA_045364815.1.CM098526.1        225926605  54 - 406759874 atcagtg--ggttgag--aattcccttgctg--tcaacaaaagttaTaactt------------gtagattt----------------------------------------------------------------------------------------------------------------------------------------
i GCA_045364815.1.CM098526.1        I 78 C 0
e GCF_028017835.1.NC_088686.1         1928448 22240 - 158421364 I
e GCF_027887155.1.NC_071508.1         3466046 29110 + 154637676 I
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I
e GCA_033349115.1.JAVFKW010000008.1    497510 12472 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         2054 507 +     31630  
s GCA_965152275.1.OZ223944.1          5057238 506 + 132879417  
i GCA_965152275.1.OZ223944.1        n 506 I 1618
s GCA_965152235.1.OZ223887.1        131400818 507 - 134836623  
i GCA_965152235.1.OZ223887.1        n 507 n 507
s GCF_009764565.3.NC_050073.1       128179562 500 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3515026 507 + 133850159  
i GCA_965140235.1.OZ222813.1        n 0 C 0
s GCA_965140285.1.OZ223564.1          6385526 507 + 135739771  
i GCA_965140285.1.OZ223564.1        n 2111 C 0
s GCA_965140295.1.OZ223117.1        128260090 507 - 131075015  
i GCA_965140295.1.OZ223117.1        I 221 I 1604
s GCF_007399415.2.NC_044325.1       124919588 498 + 155918640  
i GCF_007399415.2.NC_044325.1       I 435 I 46841
s GCF_025201925.1.NC_066621.1       124826311 498 - 162938067  
i GCF_025201925.1.NC_066621.1       I 437 I 30548
s GCA_045781085.1.CM099110.1          2254852 499 + 145055026  
i GCA_045781085.1.CM099110.1        I 12 C 0
s GCF_027887155.1.NC_071508.1         3495156 493 + 154637676  
i GCF_027887155.1.NC_071508.1       I 29110 C 0
s GCF_028017835.1.NC_088686.1         1950688 493 - 158421364  
i GCF_028017835.1.NC_088686.1       I 22240 C 0
e GCA_045364815.1.CM098526.1        225926659   0 - 406759874 C
e GCA_040894355.2.CM105055.1        111006706   0 + 311452600 C
e GCA_033958435.1.CM066698.1          3484318   0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I
e GCA_033349115.1.JAVFKW010000008.1    497510 12472 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         2561 443 +     31630 ATCTA-----CCTACCTA------------CCT----ATGTAAAA------------GTTTTATAGTGTTTGCCAATATCTTATACAATATTATATATAATAGTA-GGTATGTTTATACAA--GTATGAATTGTATTCATTTTAAGATCTTCCCAAACCATTTTTACTTACGTTATGCTATTTAGCCAAGGGGAGATGTGAACTGTGGTAATCTCAGAGACCAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACATGGGTTTTATAACAAGTTTTTACT-GGTAGAGGATGCTTCTAAGGTTTTGCCAACTTCTCAAATATAGTGGTCAGA---ACATAGATATTAAGGTAGTTATACATGTTGTCCTGTTTACTTTCGAGTCTGTGCCAGCCTAGcaaaaacattcaaaaacatgtcaaa-gataagagatt-a--aaaaaaGCCCT-CAACTCTAGTGTATATATAGAGGCAGAGTGAAG
s GCA_965152275.1.OZ223944.1        128208573 442 - 132879417 ATCTA-----CCTACCTA------------CCT----ATGTAAAA------------GTTTTAtagtgtttgccaatatcatatacaatattatatataatagta-ggtatgtttatacaa--gtatgaattgtattcattttaagatcttcccaaaccatttttacttacgttatgctatttagccaaggggagatgtgaactgtagtaatctcagggaacaaggacaagacaaataattttgctaacgcctcactaacatgggctttataacaaggttttact-ggtagaggatgcttctaaggttttgccaacttctcaaatatagtggtcaga---acatagataTTAAGGTA-TTATACATGTTGTCCTGTTTACTTTCGAGTCTGTGCCAGCCTAGcaaaaacattcaaaaacatgtcaaa-gataagagatt-a--aaaaaaGCCCT-CAACTCTAGTGTATATATAGAGGCAGAGTGAAG
i GCA_965152275.1.OZ223944.1        I 506 C 0
s GCA_965152235.1.OZ223887.1          3233150 443 + 134836623 atcta-----cctaccta------------cca----atgtaaaa------------gttttatagtgtttgccaatattatatacaatattatatataatagta-ggtatgtttatacaa--gtatgaattgtattcattttaagatcttcccaaatgatttttacttacgttatgctatttagccaaggggagatgtgaactgtggtaatctCAGAGAACAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACATGGgatttataacaagtttttact-ggtagaggatgcttctaaggttttgccaacttctctaatatagtggtcaga---acatagatattaagctagttatacatgttgtcctgtttactttcgagtctgtgccagcctagcaaaaacattcaaaaacatgtcaaa-gataagagatt-a--aaaaaacccct-caactctagtgtatatatagagGCAGAGTGAAG
i GCA_965152235.1.OZ223887.1        I 507 I 2837
s GCF_009764565.3.NC_050073.1       128180062 444 - 131128815 atctaATCTAtctatcta------------tct----atgtaaaa------------gttttatagtgttagccaatatcatatacaatattatatatagtaAT--GGTATGTTTATACAA--ATATGAATTGTATTCATCTTAAGAGCTTCCAAAATGATTTTTACTTATGTTATGCTATTTAGCCAAGGGGAGATGTGAACTATTGTAATCTCAGAGAACAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACGTGGGCTTTATAACAAGTTTTTAC--GGTAGAGGATGCTTCTAAGGTTTTGCCAACTTCTCAAATATAGTGGTCAGA---ACATAGATAATAAGCTAGTTATACGTGTTGTTCTGTTTACTTTCAAGTCTGTGCCAGCCTAGCAAAAACATTCAAAAACATGTCAAA-GATAAGAGAT-----AAAAAAACCCG-CAACTCTAGTGTATATATAGAGGCAGAGTGAAG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3515533 444 + 133850159 atcta-----cctaccta------------cca----atgtaaaa------------gttttatagtgtttgccaatattatatacaatattatatataatagtA-GGCATGTTTATACAA--GTATGAATTGTATTCATTTTAAGATCTTCCCAAATGATTTTTACTTACGTTGTGCTATTTAGCCAAGGGGAGATGTGAACTGTGGTAATCTCAGAGAACAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACATGGGCTTTATAACAAGTTTTTACT-GCTAGAGGATGCTTCTAAGGTTTTGCCAACTTCTCTAATATAgtggtcaga---acatagatattaagctagttatacatgttgtcctgtttactttcgagtctgtgccagcctagcaaaaacattcaaaaacatgtcaaa-gataagagattAa--aaaaaacccct-caactctagtgtatatatagaggcagagtgaag
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6386033 438 + 135739771 ATCTA-----CCTACCT--------------------ATGTAAAA------------GTTTtatagtatttgccaatatcatatacaatattatatataatagta-ggtatgtttatacaa--gtatgaaCTGTATTCATTTTAAGATCTTCCCAAACGATTTTTACTTACGTTATGCTATTTAGCCAAGGGGAGATGTGAACTATGGTAATCTCAGAGAACAAGGATAAGACAAATAATTTTGCTAAAGCCTCACTAACGTTGGCTTTATAACAAGTTTTTACT-GGTAGAGGATGCTTCTAAGGTTTTGCCAACTTCTCAAATATAGTGGTCAGA---ACATAGATATTAAGGTAGTTATACATGTTGTCCTGTTTACTTTCGAGTCTGTGCCAGCCTAGCAAAAACATTCCaaaacatgtcaaa-gataagagatt----aaaaaacccct-caactctagtgtatatacagagGCAGAGTGAAG
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_965140295.1.OZ223117.1          2572476 438 + 131075015 ATCTA-----CCTACCT--------------------ATGTAAAC------------GTTTTATAGTGTTTGCCAATATCATAtacaatattatatataatagTA-GGTATGTTTATACAA--ATATGAACTGTATTCATTTTAAGATCTTCCCAAACGATTTTTACTTACGTTATGCTATTTAGCCAAGGGGAGATGTGAACTATGGTAATCTCAGAGAACAAGGATAAGACAAATAATTTTGCTAAAGCCTCACTAACGTTGGCTTTATAACAAGTTTTTACT-GGTAGAGGATGCTTCTAAGGTTTTGCCAACTTCTCAAATATAGTGGTCAGA---CCATAGATATTAAGGTAGTTATACATGTTGTCCTGTTTACTTTCGAGTCTGTGCCAGCCTagcaaaaacattcaaaaacatgtcaaa-gataagagatt----aaaaaacccct-caactctagtgTATATACAGAGGCAGAGTGAAG
i GCA_965140295.1.OZ223117.1        I 507 C 0
s GCF_007399415.2.NC_044325.1         1417857 419 - 155918640 ----------------------------------------t---a------------gttttatagtgttagccaatatcgtatacaatattatatataatagt-Acgtatgtttatacaa--gtatgaactgtattcatcttaagatcttccaaaactatttttacttatgttatgctatttagccaaggggagatgtgaactattgtaatctcagagaacaaggacaagacaattaattttgctaacaccccactaacgtgcgctttataacaagtttttac-Tgctagaggatacttctaaggttttgccaacttctcaaatatagtggtcaag---gcatagataataaactagttatacatgttgtcctgtttactttccagtctgtgcaagcctagcaaaaacattcaaaaacatgtcaaaGggtaagagat-----aaaaaaaccctTcaactttagt--atagatggagacagagtgaag
i GCF_007399415.2.NC_044325.1       I 938 I 9922
s GCF_025201925.1.NC_066621.1         3082949 418 + 162938067 ----------------------------------------t---a------------gttttatagtgttagccaatatcatatacagtattttaaataatagt-Aggtatgtttatac--AAgtatgaattgtattcatcttaagatcttccaaaactagttttacttctgttatgctatttaggcaaggggagatgtgaactattgtaatctcagagAACAAGGACAAGACAAATAATTTTGCTAACACCCCACTAACGTGCGCTTTATAACAAGTTTTTAA-TGATAGAGGATACTTCTAAggttttgccaacttctcaaatatagtggtcaag---gcatagataataaactagttatacatgttgtcctgtttactttccagtctgtgcaagcctagcaaaaacattcaaaaacatgtcaaaGggtaagagat-----aaaaaaaccct-caactctagt--gtagatggagacagagtgaag
i GCF_025201925.1.NC_066621.1       I 8873 I 1726
s GCA_045781085.1.CM099110.1          2255351 387 + 145055026 ---------------------------------------------------------atttTATAGTGTTAGCCaatatcatatacaatattatatataataat-AGGTATCTTTATACAA--GTATGAATTGTATTCATCTTAAGATCttccaaaattatttttactTATGTTATGCTATTTAACCAAGGGGAGATGTGAACTATTGTAATTTCAGAGAACAAGGACAAGAGAAACAATTATGCTAAC---------------------------GTTTTTAC-TGGTAGAGGATATTTCTAAGGCTTTGTCAGCCTCTTAAATATTGTGGTCAAA---AT-TAGATAATAAACTAGTTATACATGTTGTCCTGTTTACTTTCCAGTCTGTGCAAGCCTAgcaaaaacattcaaaaacatgTCAAAGG-TAAGAGAT-----AAAACCCCCCT-CAACTCTAGT--ATAGCTGGAGACAGAGTGAAG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3495649 441 + 154637676 atcta-----tctatcta------------tct----atctaaaa------------GTTTTATAGTGTTAGCCAATCTCATATACAATATTATCTATAATAGT-AGGTATGTTTATACAA--GTATGAATTGTATTCATCTTAAGATCTTCCAAAATTATTTTTACTTATGTTATGCTATTTAACCAAGAGGAGATGTGACCTATTGTAATCTCAGAGAACAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACATATGCTTTATAACAAGTTTTTAC-TGGTAGAGGATGCTTCGAAGGTTTTGCCAACTTCTCAAATATAATGGTCAAA---ACAGAGATAATAAACTAGTTATACATGTTGTCCTGTTTACTTTCCAGTCTGTGCCAGCCTAGCAAAAACATTcaaaaacatgtcaaa-gataagagat---TAaaaaaaaccct-caactctagt--atagatagaggcagagtgaag
i GCF_027887155.1.NC_071508.1       C 0 I 236
s GCF_028017835.1.NC_088686.1         1951181 439 - 158421364 atcta-----cctaccta------------cct----acctaaaa------------gttttatagtgttagccaatatcatatacaatattatatatAATAGT-AGGTATGTTTATACAA--GTATGAATTGTATTCATCTTAAGATCTTCCAAAATTATTTTTACTTATGTTATGCTATTTAACCAAGAGGAGATGTGAACTATTGTAATCTCAGAGAGCAAGGACAAGACAAATAATTTTGCTAACGCCTCACTAACATATGCTTTATAACAAGTTTTTAC-TGGTAGAGGATGCTTCGAAGGTTTTGCCAACTTCTCAAATATAATGGTCAAA---ACATAGATAATAAACTAGTTATACATGTTGTCCTGTTTACTTTCCAGTCTGTGCCAGCCTAGCAAAAACATTCAAAAACATGTCAAA-GATAAGAGAT-----AAAAAAACCCT-GAACTCTAGT--ATAGATAGAGGCAGAGTGAAG
i GCF_028017835.1.NC_088686.1       C 0 C 0
e GCA_045364815.1.CM098526.1        225926659   0 - 406759874 C
e GCA_040894355.2.CM105055.1        111006706   0 + 311452600 C
e GCA_033958435.1.CM066698.1          3484318   0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I
e GCA_033349115.1.JAVFKW010000008.1    497510 12472 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         3004 1172 +     31630  
s GCA_965152275.1.OZ223944.1        128209015 1176 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 I 552
s GCA_965152235.1.OZ223887.1        120596394 1177 - 134836623  
i GCA_965152235.1.OZ223887.1        n 2837 n 2837
s GCF_009764565.3.NC_050073.1       128180506 1175 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3515977 1178 + 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3880118 1174 + 135739771  
i GCA_965140285.1.OZ223564.1        n 0 I 553
s GCA_033349115.1.JAVFKW010000008.1    509982  892 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 I 12472 C 0
s GCA_965140295.1.OZ223117.1          2572914 1174 + 131075015  
i GCA_965140295.1.OZ223117.1        C 0 I 553
s GCF_007399415.2.NC_044325.1       124966927 1176 + 155918640  
i GCF_007399415.2.NC_044325.1       I 46841 T 46425
s GCF_025201925.1.NC_066621.1       124857357 1174 - 162938067  
i GCF_025201925.1.NC_066621.1       I 30548 T 30178
s GCA_045781085.1.CM099110.1          2255738 1155 + 145055026  
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3496326 1172 + 154637676  
i GCF_027887155.1.NC_071508.1       I 236 C 0
s GCF_028017835.1.NC_088686.1         1951620 1171 - 158421364  
i GCF_028017835.1.NC_088686.1       C 0 C 0
e GCA_045364815.1.CM098526.1        225926659    0 - 406759874 C
e GCA_040894355.2.CM105055.1        111006706    0 + 311452600 C
e GCA_033958435.1.CM066698.1          3484318    0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         4176 553 +     31630  
s GCA_965152275.1.OZ223944.1          5059362 553 + 132879417  
i GCA_965152275.1.OZ223944.1        I 1618 I 997
s GCA_965152235.1.OZ223887.1        131402946 553 - 134836623  
i GCA_965152235.1.OZ223887.1        n 2837 T 56558
s GCF_009764565.3.NC_050073.1       128181681 555 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3517155 553 + 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131470409 552 - 135739771  
i GCA_965140285.1.OZ223564.1        I 2111 I 1252
s GCA_033349115.1.JAVFKW010000008.1    510874 539 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 210
s GCA_965140295.1.OZ223117.1        128262201 553 - 131075015  
i GCA_965140295.1.OZ223117.1        I 1604 I 1252
s GCF_007399415.2.NC_044325.1       124921678 556 + 155918640  
i GCF_007399415.2.NC_044325.1       T 46425 I 999
s GCF_025201925.1.NC_066621.1       124828353 557 - 162938067  
i GCF_025201925.1.NC_066621.1       T 30178 I 1060
s GCA_045781085.1.CM099110.1          2256893 559 + 145055026  
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3497498 554 + 154637676  
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1952791 552 - 158421364  
i GCF_028017835.1.NC_088686.1       C 0 C 0
e GCA_045364815.1.CM098526.1        225926659   0 - 406759874 C
e GCA_040894355.2.CM105055.1        111006706   0 + 311452600 C
e GCA_033958435.1.CM066698.1          3484318   0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         4729  996 +     31630  
s GCA_965152275.1.OZ223944.1        128210743  997 - 132879417  
i GCA_965152275.1.OZ223944.1        I 552 n 997
s GCA_965152235.1.OZ223887.1        131346941  996 - 134836623  
i GCA_965152235.1.OZ223887.1        T 56558 I 56402
s GCF_009764565.3.NC_050073.1       128182236  993 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3517708  997 + 133850159  
i GCA_965140235.1.OZ222813.1        C 0 I 69
s GCA_965140285.1.OZ223564.1          3881845 1010 + 135739771  
i GCA_965140285.1.OZ223564.1        I 553 C 0
s GCA_033349115.1.JAVFKW010000008.1    511623  997 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 I 210 C 0
s GCA_965140295.1.OZ223117.1          2574641 1010 + 131075015  
i GCA_965140295.1.OZ223117.1        I 553 C 0
s GCF_007399415.2.NC_044325.1         1428198  997 - 155918640  
i GCF_007399415.2.NC_044325.1       I 9922 I 1203
s GCF_025201925.1.NC_066621.1         3085093  996 + 162938067  
i GCF_025201925.1.NC_066621.1       I 1726 T 9239
s GCA_045781085.1.CM099110.1          2257452  996 + 145055026  
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3498052 1051 + 154637676  
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1953343 1013 - 158421364  
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3484318   12 - 127301102  
i GCA_033958435.1.CM066698.1        C 0 I 9
s GCA_040894355.2.CM105055.1        111006706   21 + 311452600  
i GCA_040894355.2.CM105055.1        C 0 I 412
s GCA_045364815.1.CM098526.1        225926659   21 - 406759874  
i GCA_045364815.1.CM098526.1        C 0 N 0
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         5725 67 +     31630 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacgtt-ttta-g-------aaaag--g---ta--a--t
s GCA_965152275.1.OZ223944.1          5060912 70 + 132879417 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacgtt-ttta-g-------aaaag--gAAAtg--a--t
i GCA_965152275.1.OZ223944.1        I 997 C 0
s GCA_965152235.1.OZ223887.1        131404339 70 - 134836623 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacgtt-ttta-a-------aaaag--gAAAtg--a--t
i GCA_965152235.1.OZ223887.1        I 56402 n 56402
s GCF_009764565.3.NC_050073.1       128183229 67 - 131128815 gctctagatgtataatatattatatttaatattttaata-----------------------taatat-------aaaagtt-ttta-a-------aaaag--g-----AAa--t
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130119962 71 - 133850159 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacatt-ttttAa-------aaaag--gAAAtg--a--t
i GCA_965140235.1.OZ222813.1        I 5169 I 46
s GCA_965140285.1.OZ223564.1          3882855 70 + 135739771 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacatt-tttt-a-------aaaag--gAAAtg--a--t
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    512620 66 -   2470581 gctctaggtatataatatattatatttaatattttaata-----------------------taatat-------aaaagta-aaaa-a-------aa------A--tg--aAAt
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2575651 70 + 131075015 gctctaggtgtataatatattatatttaatattttaata-----------------------taatat-------aaacatt-tttt-a-------aaaag--gAAAtg--a--t
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       124923233 61 + 155918640 gttctaggtgtata-----ttatatttaatagtttaata-----------------------taatat-------aaaagt--aaaa-a-------aaaa-A-gAAAt-------
i GCF_007399415.2.NC_044325.1       I 999 I 46434
s GCF_025201925.1.NC_066621.1         3076850 60 + 162938067 gctctaggtgtata-----ttatagttaatagtttaata-----------------------taatat-------aaaag-t-aaaa-a-------aaaa---gAAAt-------
i GCF_025201925.1.NC_066621.1       T 9239 I 9285
s GCA_045781085.1.CM099110.1          2258448 62 + 145055026 actctacgtgtata-----ttatatttaatattttaata-----------------------taatat-------aaaagta-aaaa-a-------aagaa--aTCAt-------
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499103 65 + 154637676 gctctaggtgtata-----ttctctttaatattttaatg-----------------------taatat-------aaaagta-aaaa-a-------aaaaa--gAAAtg--a--a
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954356 52 - 158421364 gctctaggtgtata-----atatatt--atatttta---------------------------------------taaatt---aaa-a-------aaaaa--gAAAtg--a--a
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3484339 53 - 127301102 -----agggagaca-----aattatt--ctcctt-aatc-----------------------tctga------------------ag-a-TGGGTTcagaa--aCAAtg--g--t
i GCA_033958435.1.CM066698.1        I 9 I 1140
s GCA_040894355.2.CM105055.1        111007139 77 + 311452600 Gttctatatgtata-----atatatt--atattt-aataTTTTAATATAATACAAAAGTGAAaatca------------------aa-a-------caaaaTTgCAAtg--a--t
i GCA_040894355.2.CM105055.1        I 412 C 0
e GCA_032164245.1.JAVMKO010000006.1   1898516 11546 - 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         5792 46 +     31630 aagtttgaa-ccaaaacatttttccttattgaaatgctaca-ttttta
s GCA_965152275.1.OZ223944.1          5060982 46 + 132879417 aaggttgaa-ccaaaacatttttccttattgaaatgctaca-ttttta
i GCA_965152275.1.OZ223944.1        C 0 I 60
s GCA_965152235.1.OZ223887.1        120599194 46 - 134836623 aaggttgaa-ccaaaacatttttccttattgaaatgataca-ttttta
i GCA_965152235.1.OZ223887.1        n 56402 n 56402
s GCF_009764565.3.NC_050073.1       128183296 39 - 131128815 aaggttgaa-ccaaaagatttttccttattgaaatgatac--------
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3518774 46 + 133850159 aaggttgaa-ccaaaagatttttccttattgaaatgataca-ttttta
i GCA_965140235.1.OZ222813.1        I 69 I 130
s GCA_965140285.1.OZ223564.1          3882925 46 + 135739771 aaggttgaa-ccaaaagatttttccttattgaaataataca-ttttta
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    512686 46 -   2470581 aaggttgaa-ccaaaacatttttccttagtgaaatgataca-ttttta
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2575721 46 + 131075015 aaggttgaa-ccaaaagatttttccttattgaaataataca-ttttta
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1   1910062 29 - 106994437 ----------------AGTTTTCCCTCCGTGTA--TATACA-TTTTTA
i GCA_032164245.1.JAVMKO010000006.1 I 11546 I 460
s GCF_007399415.2.NC_044325.1       124969728 45 + 155918640 aaggttgaa-ccaaaaca-ttttccttattgaaatgataca-ttttta
i GCF_007399415.2.NC_044325.1       I 46434 T 46434
s GCF_025201925.1.NC_066621.1       124829970 45 - 162938067 aaggttgaa-ccaaaaca-ttttccttattgaaatgatata-ttttta
i GCF_025201925.1.NC_066621.1       I 1060 I 58
s GCA_045781085.1.CM099110.1          2258510 45 + 145055026 aaggttgaa-ccaaaaca-ttttccttattgaaatgataca-ttttta
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499168 46 + 154637676 aaggttgaa-ccaaaacatttttccttattgaaatgataca-ttttta
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954408 46 - 158421364 aaggttgaa-ccacaacatttttccttattgaaatgataca-ttttta
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3485532 23 - 127301102 AAAGTTAAA-GCAATACAACCTAC------------------------
i GCA_033958435.1.CM066698.1        I 1140 C 0
s GCA_040894355.2.CM105055.1        111007216 46 + 311452600 aaagttgaa-acaaaatgtttttccttattgaaaagataca-ttttta
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         5838 60 +     31630 ccttcttgaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
s GCA_965152275.1.OZ223944.1        127688607 60 - 132879417 ccttcttgaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
i GCA_965152275.1.OZ223944.1        n 60 n 60
s GCA_965152235.1.OZ223887.1          3236430 60 + 134836623 ccttcttaaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
i GCA_965152235.1.OZ223887.1        I 2837 C 0
s GCF_009764565.3.NC_050073.1       128183335 35 - 131128815 -------------------------attattaaaatgaaatgtttagacattatcagaat
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130120079 60 - 133850159 ccttcttaaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
i GCA_965140235.1.OZ222813.1        I 46 C 0
s GCA_965140285.1.OZ223564.1          3882971 60 + 135739771 ccttcttaaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    512732 60 -   2470581 ctttcttaaaacaaaaagtttcaacattattaaaatgaaatgtttagacattatcacaat
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2575767 60 + 131075015 ccttcttaaaacaaaaagtttcaagattattaaaatgacatgtttagacattatcagaat
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95609764 11 + 106994437 CTTTCTGGAAA-------------------------------------------------
i GCA_032164245.1.JAVMKO010000006.1 n 460 I 313
s GCF_007399415.2.NC_044325.1       124923339 58 + 155918640 ccttcacgaaacaga--gtttcaacattattaaaatgaaatgtttagacaatatcagaat
i GCF_007399415.2.NC_044325.1       T 46434 I 46434
s GCF_025201925.1.NC_066621.1         3086195 58 + 162938067 ccttctcaaaacaga--gtttcaacattattaaaatgaaatgtttagacattatcagaat
i GCF_025201925.1.NC_066621.1       I 9285 T 8743
s GCA_045781085.1.CM099110.1          2258555 60 + 145055026 ctttCTCAAAACAAAGAGTTTCAACATTATTATAAGGAAATATTTAGACATTATCAGAAT
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499214 60 + 154637676 ccttctcaaaacaaaaagtttcaacattattaaaatgaaatgtttagacattatcataat
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954454 60 - 158421364 ccttctcaaaaaaaaaagtttcaacattattaaaatgaaatgtttagacattatcagaat
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111007262 59 + 311452600 c-tcctcgaaacaaaatatttcaacattattaaaactaaatgattagacattatcaaaat
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCA_033958435.1.CM066698.1          3485555  0 - 127301102 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         5898 70 +     31630 gaaacttcttcatggtcccagactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
s GCA_965152275.1.OZ223944.1          5061088 70 + 132879417 gaaacttcttcatggtcccaaactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCA_965152275.1.OZ223944.1        I 60 I 188
s GCA_965152235.1.OZ223887.1          3236490 70 + 134836623 gaaacttcttcatggtcccaaactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCA_965152235.1.OZ223887.1        C 0 I 1238
s GCF_009764565.3.NC_050073.1       128183370 70 - 131128815 gaatcttcttcatgtttccaaactgaaattgttctgaattgtg-ttttttgtgggaaatgtcaaaa-tattg
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130120139 70 - 133850159 gaaacttcttcatggtcccaaactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tatgg
i GCA_965140235.1.OZ222813.1        C 0 I 188
s GCA_965140285.1.OZ223564.1          3883031 70 + 135739771 gaaacttcttcatggtcccaaactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCA_965140285.1.OZ223564.1        C 0 I 584
s GCA_033349115.1.JAVFKW010000008.1    512792 70 -   2470581 gaaacttcttcatggtcccaaacggaaattgttctgaattgtg-gtttttgtgggaaatgtcaaaa-tattG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2575827 70 + 131075015 gaaacttcttcatggtcccaaactgaaattgctctgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCA_965140295.1.OZ223117.1        C 0 I 584
s GCF_007399415.2.NC_044325.1       124969831 71 + 155918640 gaaacctCCTGATGGTCCCAAAGTGAAATTGTTCCAAATTGTG-GTTTTTGTGGGAAATGCCAAAAGTATTG
i GCF_007399415.2.NC_044325.1       I 46434 T 46433
s GCF_025201925.1.NC_066621.1       124830073 70 - 162938067 gaaacctcctgatggtcccaaagagaaattgttccaaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCF_025201925.1.NC_066621.1       I 58 C 0
s GCA_045781085.1.CM099110.1          2258615 70 + 145055026 GAAACCTCCTGATGGTCCCAAAGTGAAATTGTTCCAAATTGTG-GTTTTTGTgggaaatgtcaaaa-tattg
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499274 70 + 154637676 gaaacttcttcatggtcccaaagtgaaattgttccgaattgag-gtttttgtgggaaatgtcaaaa-tattg
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954514 70 - 158421364 gaaacttcttcatggtcccaaactgaaattgttccgaattgtg-gtttttgtgggaaatgtcaaaa-tattg
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111007321 69 + 311452600 gaaacttcctgatggtctgaaactgacatttttcagaattgtg-gtttt-gtgggaaatttcaaaa-cactg
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCA_033958435.1.CM066698.1          3485555  0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1  95609775 313 + 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         5968 188 +     31630 gctctctgttacaattcggaa-------------tgaaatgtgggaattttctgaggaagagggatcgcagtttctgaccagttctatttctaacacagctctaccaatgtttatggagtgctcggctgactggatgttgaacggggg--aatgtcattgactgcaactgctatattccttccctactgctcagccagtgt---------------------g-g
s GCA_965152275.1.OZ223944.1        128211986 188 - 132879417 gctctctgttacaattcggaa-------------tgaaatgtgggaattttctgaggaagagggatcgcagtttctgaccagttctatttctaacacagctctaccaatgtttATGGAGTGCTCGGCTGACTGGATGTTGAACGGGGG--AATGCCATTGCCTGCAATGGCTATATTCCTTCCCTACTGCTCAGCCAACGT---------------------G-G
i GCA_965152275.1.OZ223944.1        n 188 I 399
s GCA_965152235.1.OZ223887.1        131404585 188 - 134836623 gctctctgttacaattcggaa-------------tgaaatgtgggaattttctgagGAAGAGGGATCGCAgtttctgaccagttctatttCTAACATAGCTCTACCAATGTTTATGGAGTGCTCGGCTGACTGGATGTTGAACGGGGG--AATGCCATTGCCTGCAATGGTTATATTCCTTCCCTGTTGCTCAGCCAGCAT---------------------G-G
i GCA_965152235.1.OZ223887.1        n 1238 n 1238
s GCF_009764565.3.NC_050073.1       128183440 188 - 131128815 actctctgttacaattcagaa-------------tgaaatgtgggaattttctgaggaagagggatagcagtttctgaccaattctaTTTCTAACACAGCTCTACCAATGTttatggagtgctcagctgactggatgttgaacggggg--tatgccattgcctccaatggctatattccttccctcttgctcagccagcat---------------------c-g
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3518950 188 + 133850159 gcTCTCTGTTACAATTCGGAA-------------TGAAATGTGGGAATTTTCTGAGGAAGAGGGATCACAGTTTCAGACCAGTTCTATTTCTAACACAGCTCTACTAATGTTTATGGAGTGCTCGGCTGACTGGATGTTGAACGGGGG--AATGCCATTGCCTGCAGTGGCTATATTCCTTCCCTGTTGCTcagccagcat---------------------g-g
i GCA_965140235.1.OZ222813.1        I 130 I 1481
s GCA_965140285.1.OZ223564.1        131472213 188 - 135739771 gcTCTCTGTTACAATTCGGAA-------------TGAAATGTGGGAATTTTCTGAGGAAGAGGGATCGCAGtttctgaccagttctatttCTAACACAGCTCTACTAATGTTTATGGAGTGCTCGGCTGACTGGACGTTGAACGGGGG--AATGCCATTGCCTGCAGTGGCTATATTCCTTCCCTGTTGCTcagccagcat---------------------g-g
i GCA_965140285.1.OZ223564.1        I 1252 C 0
s GCA_033349115.1.JAVFKW010000008.1    512862 189 -   2470581 GCACTCGGTTACGATTCGTAA-------------TGTAATGTGGGCATTTTCTGAGGAAGAGGGATAGCAGTTTCTGATCAGCTCTATTTCTAATACAGCTCTACCAATGTTTATGAAGCACTCGGCTGACTTGATGTTGAATGGGGG--TATGCCATTGCCTCCAATGGCTATATGCTTTCCCTGTTGCTCAGCCAGCAT---------------------GCG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128264006 188 - 131075015 gcTCTCTGTTACAATTCGGAA-------------TGAAATGTGGGAATTTTCTGAGGAAGAGGGATCGCAgtttctgaccagttctatttCTAACACAGCTCTACTAATGTTTATGGAGTGCTCGGCTGACTGGACGTTGAACGGGGG--AATGCCATTGCCTGCAGTGGCTATATTCCTTCCCTGTTGCTcagccagcat---------------------g-g
i GCA_965140295.1.OZ223117.1        I 1252 C 0
s GCF_007399415.2.NC_044325.1       124923469 185 + 155918640 --TCTCTCTTATAATTCGGAA-------------TGAAATGTGGGAATTTTCTGAGGAAGAGGGATAGCGGTTTCTGACCTGTTCTATGTCTAACACGTTACTACCAATGTttaaggagcgctcggctgactggatgttgaacggggg--tatgccattacctccagtggctatattccttgcctgctgctcagctagCA----------------------A-G
i GCF_007399415.2.NC_044325.1       T 46433 C 0
s GCF_025201925.1.NC_066621.1       124830143 185 - 162938067 --tctctcttataattcggaa-------------tgaaatgtgggaattttctgaggaagagggatagcggtttctgacctgttctaTGTCTAACACATTACTACCAATGTTTAAGGAGCGCTCGGCTGACTGGATGTTGAATGGGTG--TATGCCATTACCTCCAGTGGCTATATTCCTTGCCTGCTGCTCAGCTAGCA----------------------A-G
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099110.1          2258685 185 + 145055026 gcTCTCTGTTACAATTCGGAA-------------TGAAATGTGGGAATTTTCTGAGGAAGAGGGATAGCGGTTTCTGACCAGTTCTATGTCTAACACATCTCTACCAATGTTTAAGGAGCGCTCGGCTGACTGGATGTTGAACGGGGG--TATGAATGTGCCTC---TGGCTATATTCCTTGCCTGCTGCTCAGCCAGCAT---------------------g-g
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499344 190 + 154637676 gctctctgttacaattcggaa-------------tgaaacgtgggaattttctgaggaagagggatagcggtttctgaccagttctaTGTCTAACACAGCTCTACCAATGTttatggagtgcttggctgacaggatgttgaatgggggTAtatgccattgcctccgatggctatattccttgcctgctgctcagccagcac---------------------g-g
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954584 188 - 158421364 gctctctgttacaagtcggaa-------------tgaaatgtgggaattttctgaggaagagggatagcggtttctgaccagttctaTGTCTAACACAGCTCTACCAATGTttatggagcgcttggctgacaggatgttgaatggggg--tatgccattgcctccgatggctatattccttgcctgctgctcagccagcat---------------------g-g
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111007390 200 + 311452600 gctttctgttACAATTTGGACGGGAACATTTTTTtGAAATGTGCGAATTTTCTGAGGAACAGGGATCATGGTTTCTGATCAGTCCTAGTTCTAACACAGCTCTACCAATGTTTATGGAGTGCTTTGCTGACTGGATGTTGAATTGGAC--TATGC-ATTGCCTCCAATGGCTATATCCCTTCCCTGTGGCTCAGCCAGCAT---------------------G-G
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCA_033958435.1.CM066698.1          3485555   0 - 127301102 C
e GCA_032164245.1.JAVMKO010000006.1  95609775 313 + 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1         6156 398 +     31630 ggggg-------------------aaggtgccGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGTGCTACCGTTTATACC-----TGATCACAGTGATT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCATTCAAATACCTAATTCTGTGTGAAAATCACACTGACTCAGACTGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTGTTAA-AAAA--GCCAACTAATTAAAGTTGGTTAAAGAT--GGAAAAAACAA---T-GATTAGGGAAGCGGACAATCTGGTCATCCTGGAAGTCAGGGAAGTCTCAGATTCTGGGGATGCAGGAAATTCTCCAGTCCACCAGCACACCAA-------GCAGGCAGCCTAGGCAACTGGCTGCCCAGGAAGATGGGG
s GCA_965152275.1.OZ223944.1          5061346 399 + 132879417 GGGGG-------------------AAGGTGCCGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGTGCTATCGTTTATACC-----TGATCACAGTGACT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGTGTGAAAATCACACTGACTCAGACTGATTTCAGCTTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTGTTAA-AAAAAAGCCAACTAATTAAAGTGGGTTAAATAT--GGAAAAAACAA---C-AATTAGG-AAGCGGACAATCTGTGCATCCTGGAAGTCAGGGAAGTCTCAGATTCTGGGGATGCAGGACATTCTCCAGTCCACCAGCACACCAA-------GCAGGCAGCCTAGGCAACTGGCTGCCCAGGAAGATGGGG
i GCA_965152275.1.OZ223944.1        I 188 I 249
s GCA_965152235.1.OZ223887.1        120599559 400 - 134836623 G-GGG-------------------AAGGTGCCGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGGGCTACCGTTTATACC-----TGATCACAGTGACT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGTATGAAAATCACACTGAATCAGAATGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGCGAGAAACTGTT-a-aaaaAAGCCAACTAATTAAAGTGggttaaatat--gaaaaaaaaaaAACc-aatta-gGAAGCAGACAATCTGGGCATCCTGGAAGTCAGGGAAGTCTCAGATTTTGGGTATGCAGGAAATTCTCCAGTCCACCAGCACACCAA-------GCAGGCAGCCTGGGCAACTGGCCGCCCAGGAAGATGGGG
i GCA_965152235.1.OZ223887.1        n 1238 C 0
s GCF_009764565.3.NC_050073.1       128183628 385 - 131128815 ggggg-------------------aagttgccGTTATTGACTCTGATTCTCT--------TCTGCCTTGCTTCTTGTCCTATCGTTTATAGC-----TGATCACAGTGACT-ACCAAAGAGAGGATCAGTTA--TTATAT-TTCACTCAAATATCTAATTCTGTGTGAAAATAACACTGAATCAGAATGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTGTT---AAAAAAGCCAACTAATTAAAGTGGGTTAAATAT--GGAAAAAACAA---C-GATTAGGGAAGCGGACGATTTGGGCAACCTGGAAGTCAGGGAAGTCTCAGATTCTGGGGATGCAGGAAATTCTCCAGTCCACT--------------------GGCAGCCTGGGCAACTGGTAGCCCAGGAAGATGGGG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130120397 396 - 133850159 gggaa-------------------aagtTGCCGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGTGCTATCGTTTATACC-----TGATCACAGTGACT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGTGTGAAAATCACACTGAATCAGAATGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTATT-a-aaaaAAGCCAACTAATTAAAGTGGGTTAAAGAT--GGAAAAAACAA---T-GATTAGGGAAGCGGACAATCTGGACATCCTGGAAGACAGGGAAGTCTCAGATTCTGGGGATGCAGGAAATTCTCCAGTCCACCAGCACATCAA-------GCAGGCAGCCTGGGCAACTGGCCGCCCAGGAAAATG---
i GCA_965140235.1.OZ222813.1        I 188 C 0
s GCA_965140285.1.OZ223564.1        131472401 396 - 135739771 gggaa-------------------aagtTGCCGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGTGCTATCATTTATACC-----TGATCACAGTGACT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGTGTGAAAATCACACTGAATCAGAATGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTATT-a-aaaaAAGCCAACTAATTAAAGTGGGTTAAAGAT--GGAAAAAACAA---T-GATTAGGGAAGCGGACAATCTGGGCATCCTGGAAGACAGGGAAGTCTCAGATTCTGGGGATGCAGGAAATTCTCCAGTCCACCAGCACATCAA-------GCAGGCAGCCTGGGCAACTGGCCGCCCAGGAAAATG---
i GCA_965140285.1.OZ223564.1        C 0 I 6102
s GCA_033349115.1.JAVFKW010000008.1    513051 397 -   2470581 AGGGG-------------------AAGTTGCTGTTATTGACTCTGATTTTCT--------CCTGCCTTGCTTCTTCTGCTATCGTTTATACC-----TGATCACAGTGACT-ACTGAAGAGGGGATTAACTA--TTATAT-TTCACTCAAATACCTCATTCTGGGGGGAAATAACACTGCATCAGAATGATTTCAGCCTGGCTG-CACCTCATGAAGAAGAGCTGCAAATATATAA---AGCCCTTCGGAGAGAAAGTGTT-A-AAAAA-GCCAACTAAGTAAAGCGGGTTGAATATG---GAAAAACGG---T-GGCTAGGGAAGCGGACAATCTGGGCATCCTGGACGTCAGGGAAGTCTCAGATCCTGGGGATGCAGGAAATTCTCCAGTCCACCAGCACACCAA-------GCAGGCAGCCTGGGCAACTGACCGCCCAGGAAGATGGGG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128264194 396 - 131075015 gggaa-------------------aagtTGCCGTTATTGACTCTGATTCTCT--------CCTGCCTCGCTTCTTGTGCTATCATTTATACC-----TGATCACAGTGACT-ACTGAAGAGAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGTGTGAAAATCACACTGAATCAGAATGATTTCAGCCTGTCTG-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGCCCTTCAGAGAGAAACTATT-a-aaaaAAGCCAACTAATTAAAGTGGGTTAAAGAT--GGAAAAAACAA---T-GATTAGGGAAGCGGACAATCTGGGCATCCTGGAAGACAGGGAAGTCTCAGATTCTGGGGATGCAGGAAATTCTCCAGTCCACCAGCACATCAA-------GCAGGCAGCCTGGGCAACTGGCCGCCCAGGAAAATG---
i GCA_965140295.1.OZ223117.1        C 0 I 6122
s GCA_032164245.1.JAVMKO010000006.1   1910551 314 - 106994437 ----------------------------------------------------------------------------------------------------------TCCCTTAAGCATGTGGGTATCCGCTA--TTATAT-TTCACTCAGCTACCTAATTCTGGGGGGAAAGCACCCTGAATCAGAATGATTTCAGCCTGTCTG-CACCTTTTGAAGGAGAGCTTCCAATAGATAA---AGCCCTTCagagagaaagggtt-a-aaaaAAgccaactgaataaagcaggttgaatatGGggaaaaaacag---c-tgctagggaagcaaacattctgggcatcctagatgtcaggaaaatctcagatcctggggatgtaggaaattctccagtccaccatcac---------------------ctgggcaactggccccccaggaagactggg
i GCA_032164245.1.JAVMKO010000006.1 I 460 I 194
s GCF_007399415.2.NC_044325.1       124923654 407 + 155918640 ----G--------GGGGGGGTGAGAAGTTGCCGTTATAGACTCTAATTCTCT--------CCTGCCTTGTTTTTTGTGCTATCATTTATTCC-----GAATCACAGTGACT-ACTAAAGACAGGATCAACTA--TTGTAT-TTCACTCAAATACCTAATTCTGGGGGAAAATAACACTGAATCAGGATAATATCAGCTTATGTG-CACCTCATGAAGAAGAGCATCAAATATATAA---AGTCCTTCAGAGAGAAATTATT-T-AAAAAAGCCAACTAAATAAAGTGGATTGAATATA-GAAAAAAACAA---T-GGTTAGGGAAGTGGACAATCTGGGCATCCTAGGAGTCAGGGAAGTCTCAAATCCTGGGGATGCAGGACATTCTCCAGTCCATCAACACAGCAA-------GCAGGAAGCCTGGACAACTGGCTTCCAAGAAAGATGAGG
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       124830328 415 - 162938067 ----GCGGGGGGAGGGGGGATGAGAAGTTGCCGTTATTGACTCTAATTCTCT--------CCTGCCTTGTTTCTTGTGCTATCATTTATACT-----GAATCACAGTGACT-ACTAAAGACAGGATCAACTA--TTATAT-TTCACTCAAATACCTAATTCTGGGGGAAAATAACACTGAAACAGGATAATATCAGCTTATCTG-GACCTCATGAAGAAGAGCATCAAATATATAA---AGTCCTTCAGAGAGAAATTATT-T-AAAAAAGCCGACTAAATAAAGTGGATTGAATATA-GAAAAAAACAA---T-GGCTAGGGAAGTGGACAATCTGGGCATCCTAGAAGTCAGGGAAGTCTCAGATTCTGGGGATGCAGGACATTCTCCAGTCCATCAACACAGCAA-------GCAGGAAGCCTGGACAACTGGCTGCCAAGGAAGATGAGG
i GCF_025201925.1.NC_066621.1       C 0 I 249
s GCA_045781085.1.CM099110.1          2258870 400 + 145055026 ----g--------G-------GGGAAGTTGCCATTATTGACTCCGATTCTCT--------CCTGCCTTGCTGCTTGTGCTATCGTTTACATC-----AGATCACAGTGACT-ACAAAAGAGAGGATCAACCA--TTATAT-TTCACTCAAATACCTAATTCGAGGGAAAAGTAACACTGAATCAGGATGATTTCAGCCTATCTG-CACCTCATGAAGAAGAGCATCAAATATATAA---AGTCCTtcagagagaaattatt-t-aaaaAAgccAGTTACATAAAGCGGATTGAATATA-GaaaaaaaCAG---T-GGCTAGAGAAGCGGACAATCTGGGCATCCTAGAAGTCAGGGAAGTCTCTGATCCTGGGGATGCAGGACTTTCTCCAGTCCgtcagcacagcaa-------gcaggaagccTGGGCAACTGGCTGCCAAGGAAGATGGGG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3499534 407 + 154637676 g------------GC--CGGGGGGaagttgccGTTATTGACTctgattctct--------cctgccttgcttcttgtgctatcgtttatacc-----tgatcacagtgact-actaaagtgggGATCAACTACCTCAAATACTCACTCAAATACCTAATTCTGGGGGAAAATAACACGGAATCGGAATGATTTCAGCCTGTCTT-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGTCCTTCAGAGAGAAATTATT-T-TAAAAAGCCAACTAAATAAAGCGGATTGAATATA-A-AAAAAACAG---T-GGCTAGGGAAGCGGACAATCTGGGCATCCTAGAAGTCAGGGAAGTCTCAGATCCTGGGGATGCAGGAAATTCTCCAGTCCATCAGCACAGCAA-------GCAGGCAGCCTGGGCAACTGGCTGTCCAGGAAGATGGGG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1954772 413 - 158421364 ggggg--------GAGGGGGGGGGAAGTTGCCGTTATTGACTctgattctct--------cctgccttgcttcttgtgctatcgtttatacc-----ggatcacagtgact-attaaaGGGAGGATCAACTACCTCAAATACTCACTCAAATACCTAATTCTGGGGGAAAATAACACTGAATCAGAATGATTTCAGCCTGTCTT-CACCTCATGAAGAAGAGCTTCAAATATATAA---AGTCCTTCAGAGAGAACTTATT-T-TAAAAAGCCAACTAAATAAAGCGGATTGAATATA-G-AAAAAACAG---T-GGCTAGGGAAGCGGACAATCTGGGCATCCTAGAAGCCAGGGAAGTCTCAGATCCTGGGGATGCAGGAAATTCTCCAGTCCATCAGCACAGCAA-------GCAGGCAGCCTGGGCAACTGGCTGCCCAGGAAGATGGGG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111007590 299 + 311452600 GGAG--------------------AAGTTGCAGTTATTGACTCTGATTCTCC--------CCTGTCTTGCCCCTTGTGCTATCATTTCTACC-----TGAGCCCAGTGAAT-GTTAG-GTGAGGAGCCACTA--TTCTAT-TTCACCCAAATACCTAATTCTGTGTGAAAATAATACTGAATCACAATTATTTCAGTCAGTCCTGCATGTCATGAAGAATCAGCCCAAATAGATAAAGCAGCCCTTCTCAATGAAGTTGTT-a------------ctaagtagagctggttgaaaatG-gaaaaa--cag---tGGGCTGGGGAAACAGACAGTCTGGGCATTCTGGAATTCAGGG--------------------------------------------------------------------------------------------------
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCA_033958435.1.CM066698.1          3485555   0 - 127301102 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         6554 249 +     31630 ATCCAGGGGAGCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGGCAGTTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACATGGTCT----------------GGTAGGAGACCAGGCAAGAACACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGtaaatgtgtggcctcctccc---aaatgtctctttgtggctttgaggcaaccctgcaagtggccccccatctcagtttcccttttgGGTAACTCCAAGCTT
s GCA_965152275.1.OZ223944.1        128212573 249 - 132879417 ATCCAGGGGACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGGCAGTTTG----CCCACCCACCCATCAGCCATCAGGCATGCACATGGTCT----------------GGTAGGAGACCAGGCAAGAAGACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCC---AAATGTCTCTttgtggctttgaggcaaccctgcaagtggccccccatctcagtttcccttttgGGTAACTCCAAGCTT
i GCA_965152275.1.OZ223944.1        I 399 I 2498
s GCA_965152235.1.OZ223887.1        120599959 246 - 134836623 ATCCAGGGGACCGGGTAGGCTGGGGAGCCTGAGAGCTTGAAGGAGCAGGGTGGTTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACATGGTCT----------------GGTAGGAGACCAGGCAAGAAGACTA-GCTTCCTGTGGTACA-TTTT-AATTCAGTCTATAAATGTGTGGCCTCCTCCC---GAATGTCTCTTTGTGGCTTTGAGGCAACCCTGCAAGTGGCCCCCcgtctcagtttcccttttggGTAACTCCAAGC--
i GCA_965152235.1.OZ223887.1        C 0 I 2
s GCF_009764565.3.NC_050073.1       128184013 247 - 131128815 ATCCAGGGGACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGGCGGCTTG----CCAACCCACCCATCAGCCAGCAAGCATGCATGTGGCCT----------------GGTAGGAGACCAGGCAAGAAGACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCC---ACATatctctttgtggctttgaggcaaccctgcaagtggccccccatctcagtttcccttttgggtaactccAAGC--
i GCF_009764565.3.NC_050073.1       C 0 I 2
s GCA_965140235.1.OZ222813.1        130120793 242 - 133850159 -----GGGGACCAGGTAGGCTGGGGAGCCTGAGAACTTGGAGGAGCAGGGCGGCTTG----CCCACGCACCCATCAGCCAGCAAACATGCATGTTGCCT----------------GGTAGGAGACCAGGCAAGATGACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCC---AAATGTCTCTTTGTGGCTTTGAGGCAACCCTGCAAGTGGCCCCCcatctcagtttcccttctgggTAACTCCAAGC--
i GCA_965140235.1.OZ222813.1        C 0 I 2
s GCA_965140285.1.OZ223564.1          3883685 242 + 135739771 -----GGGAACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGACGGCTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACGTGGCCT----------------GGTATGAGACCAGGCAAGAAGACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCC---AAATGTCTCTTTGTGGCTTTGAGGCAACCCTGCAAGTGGCCCCCcatctcagtttcccttctgggTAACTCCAAGC--
i GCA_965140285.1.OZ223564.1        I 584 I 2
s GCA_033349115.1.JAVFKW010000008.1    513448 247 -   2470581 ATCCCAGGGACCAGCTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGGCGGCTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACATGGCCT----------------GGTAGGAAACCAGGCAGGAAGACCAGGCTTCGCGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCT---GAATGTATCTTTGTGGCCTTGAGGCAACCCTGCAAGTGGCCCCTTGTCTCAGGTTCCCTTTTGGGTAACTCCAAGC--
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 2
s GCA_965140295.1.OZ223117.1          2576481 242 + 131075015 -----GGGAACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAGCAGGACGGCTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACGTGGCCT----------------GGTATGAGACCAGGCAAGAAGACCAGGCTTCCTGTGGTACA-TTTT-AATTCAGTCTGTAAATGTGTGGCCTCCTCCC---AAATGTCTCTTTGTGGCTTTGAGGCAACCCTGCAAGTGGCCCCCcatctcagtttcccttctgggTAACTCCAAGC--
i GCA_965140295.1.OZ223117.1        I 584 I 2
s GCA_032164245.1.JAVMKO010000006.1  95610088 195 + 106994437 atcccagggaccaggtaggctgggaggcctgagagcttggaggag------------------------------------------------------------------------taggagaccaggcaggaaaaccaggcttcctgtGGTACA-TTTT-AATTCAGTCtgtaaatatgtggcctcctccc---gagtgtctctttgtggccctgaggcagccctaaaattggcccctcatctcaatttcccttttgggtaactccaagc--
i GCA_032164245.1.JAVMKO010000006.1 I 313 I 839
s GCF_007399415.2.NC_044325.1       124924061 244 + 155918640 ATCCTAGGGATGAGGTAGGCTGGGGAGCGTGAGAGCTTGGAGGAACAGGGTGGCTTG----CACTACCACCCATCAGCCAGCAAGCATGCACATGGCCT----------------GGAAGGAAACCAGGCAGGAAGACCAGGCTTCTTGTGATGCA-TTTT-AATTCAGTCTGTATATGTGTGGCCTCCT------GAATGTATATTTGTGGctttgaggcagccctgcaagtggcccctcatctcagtttcccttttggataactccaagc--
i GCF_007399415.2.NC_044325.1       C 0 I 2
s GCF_025201925.1.NC_066621.1         3077510 247 + 162938067 ATCCCAGGGATCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGAAACAGGGCGGCTTG----CCCACCCATCCATCAGCCAGCAAGCATGCACATGGCCT----------------GGTAGGAAACCAGAAAGGATGACCAGGCTTCCTGTGATGCA-TTTT-AATTCAGCCTGTATGTGTgcggcctcctcct---gaatgtatctttgtggctttgaggcagccctgcaagtggcccctcatctcagtttccctttggggtaactccaaGC--
i GCF_025201925.1.NC_066621.1       T 8743 I 9514
s GCA_045781085.1.CM099110.1          2259270 247 + 145055026 ATCCCAGGGACCAGGTTGGCTGGGAAGCCTGAGAGTTTGGAGGAATGGGGCGGCTTG----CCCACCCACCCATCAGCCAGCAAGCATGCACATGGCCT----------------GGGGGGAAACCAGGCAGGAAGACCAGGCTTCCTGTGGTGCA-TTTT-AATTCAGTCTGTATATATATGGCCTCCCCCT---GAATGTCTCTTTGTGGCTTTGAGGCAGCCCTACAAGTGGCCCCTCATCTCAGTTTCCCTTTTGGGTAACTCCAAAC--
i GCA_045781085.1.CM099110.1        C 0 I 2
s GCF_027887155.1.NC_071508.1         3499941 247 + 154637676 ATCCCAGGGACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAACAGGGCTGCTTG----CCCACCCACTCATCAGCCAGCACGCATGCACACGGCCT----------------GGTAGGAAACCAGGCAGGAAGACCAGGCTTCCCGTGGTGCA-TTTT-AGTTTAGTCTGtaaatgtgtggcctcctccc---gaatgtctctttgtggctttgaggcagccctgcaagtggcctctcgtctcagtttcccttttgggtaactccaagc--
i GCF_027887155.1.NC_071508.1       C 0 I 2
s GCF_028017835.1.NC_088686.1         1955185 231 - 158421364 ATCCCAGGGACCAGGTAGGCTGGGGAGCCTGAGAGCTTGGAGGAACAGGGTGGCATG----CCCACCCACTCATCAGCCAGCA--------------------------------AGTAGGAAACCAGGCAGGAAGACCAGGCTTCCTGTGGTGCA-TTTT-AATTCAGTCTGTAAATGTgtggcctcctccc---gaatgtctctttgtggctttgaggcagccctgcaagtggcccctcgtctcagtttcccttttgggtaactccaagc--
i GCF_028017835.1.NC_088686.1       C 0 I 2
s GCA_040894355.2.CM105055.1        111007889 236 + 311452600 ---------------TAAGCCAGCGATCCTGAgagcttggaggagcagggcggcctgCCCAcccacccacccaccagccagca----------------GGCAGGCGCGTGGCCTggtaggaaatcaggcaggcagaccagacttcctgtggtaca-gttt-gattcagtctgTAAACGCGTGGCCTCCTCCC---GGGTATCTCCCTGTGGCCTTGAGGCAGCCCTGCAAGTGGCCCCTCATCTCAGTTGCCCTCTTGGGTAACCCAAAGC--
i GCA_040894355.2.CM105055.1        C 0 I 2
e GCA_033958435.1.CM066698.1          3485555   0 - 127301102 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         6803 411 +     31630 TTCATTTAATGCTCTTACTCAAACAGTAGTCATCCTGGGGGC------CAGTTACCCAGG---CTGCCTGT--CTGGTGTGCT-------GTGA--G----GGTAG-----------GGG----TAGG--GG---------TGACTGCCTGCATACCCAGGATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATACCATCCCAATGCATACAGTCCTTGTTCTCCCCATACCCCAGTGTCCTCCACAACAGCTCAGCTCCTTAGCTGTTCTCTTCCAACCCTGTGCCAGAACAGCCCCCGC-AACCTCCCTCCCCCCACTGTccagcccttccttctctggtgcaa-ccccc-c-acttcccagtgggcactccca------------------catccttgccagggagcatcc-tca-ctcccctggcccttctcactgtccattaggatccagctgttctgcaaggagacatcagcat
s GCA_965152275.1.OZ223944.1          5061994 411 + 132879417 TTCATTTCATGCTCTTACTCAAACAGTAGTCATCCTGGGGGC------CAGTTACCCAGG---CTGCCTGT--CTGGTGTGCT-------GTGG--G----GGGAG-----------GGG----GAGG--GG---------TGACTGCCTGCATACCCAGGATCTGGGATCTCTCTGACT------TCCAGGGAAGTACTCCATACCATCCCAATGCATACAGTCCTTGTTCTCCccataccccagtgtcctccaccacagctcagctccttagctgttctcttccaaccctgtgccagaacagccccccc-aacctccctccccccaccgtccagcccttccttctccggtgcaa-ccccc-c-acttcccagtgggcactccca------------------catccttgccagggagcatcc-tca-ctcccctggcccttctcactgtccattaggatccagctgttctgcaaggagacatcagcat
i GCA_965152275.1.OZ223944.1        I 249 C 0
s GCA_965152235.1.OZ223887.1        120600207 411 - 134836623 TTTATTTCATGCTCTTACTCAAACAGTAGTCATTCTGGgggc------cagttacccagg---ctgcctgt--ctggtgtgct-------gtgg--g----gagag-----------ggg----gagg--gg---------tgactgcctgcatacccaggatctggggtctccctgact------tccagggaagtactccataccatcccaatgcatacagtccttcctctccccataccccagtgtcctccacaacagctcagctccttagctgttctcttccaaccctgtgccagaacagcccccccA-acctccctccccccaccgtccagccctttcttctctggtgcaa-ccccc-c-acttcccaGTGGGCACTCCCA------------------CATCCTTGCCAGGGAGCAT-CCTCA-CTCCCCTGGCCCTTCTCACTGTCCATTAGGATCCAGCTGTTCTGCAAGGAGACATCAGCAT
i GCA_965152235.1.OZ223887.1        I 2 I 484
s GCF_009764565.3.NC_050073.1       128184262 407 - 131128815 TTCATTTCAAACTCTTACTCAAACAGTAGTCATCCT-GGGGG------CAGTTACCCAGG---CTTCCTGTCACCCAGGTGCT-------GTGG--G----GGGA---------------------GG--GG---------TGATTGCCTGAATACCCAGGATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATACCATCCCAATGCATACAGCCCTTGTTCTCCccataccccagtgtcctccaccacagctcagctccttagctgtcctcttccaaccctgtgtcagaacagcccccccA-accaccctccccccaccgtccagcccttttttctccagtgcaa-ccccc-c-acttaccagtgagcactccca------------------catccttgccagggagcatccTctg-ctcccctggcccttctcactgtccattaggatccaactgttctgcaaggagacatcagcat
i GCF_009764565.3.NC_050073.1       I 2 C 0
s GCA_965140235.1.OZ222813.1        130121037 412 - 133850159 TTCATTTCACACTCTTACTCAAACAGTAGTCATCCTGGGGGC------CAGTTACCCAGG---CTGCCTGT--CTGgtgtgct-------gtgg--g----gggag-----------ggg----gagg--ag---------tgactGCCTGCATACCCAGGATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATACCATCTCAATGCATACAGTCCTTGTTCTCCCCATACCCCAGTGTCCTCCACCACAGCTCAGCTCCTTAGCTGTCCTCTTCCAACCCTGTGCCAGaacagcccccccA-acctcccgccccccaccgtccagcccttccttctctggtgcaa-ccccc-c-acttcccaGTGGGCACTCCCA------------------CATCCTTGCCAGGGAGCATCCCTTG-CTCCCCTGGCCCTTCTCACTGTCCATTAGGATCCAGCTGTTCTGCAAGGAGACATCAGCAT
i GCA_965140235.1.OZ222813.1        I 2 C 0
s GCA_965140285.1.OZ223564.1          3883929 413 + 135739771 TTCATTTCACACTCTTACTCAAACAGTAGTCATCCTGGGGGC------CAGTTACCCAGG---CTGcctgt--ctggtgtgct-------gtgg--g----aggag-----------ggg----gagg--ag---------tgactgCCTGCACACCCAGGATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATACCATCTCAATGCATACAGTCCTTGTTCTCCCCATATCCCAGTGTCCTCCACCACAGCTCAGCTCCTTAGCTGTCCTCTTCCAACCCTGTGCCAGaacagcccccccA-acctccctccccccaccgtccagcccttccttctctggtgcaaCccccc-c-acttcccAGTGGGCACTCCCA------------------CATCTTTGCCAGGGAGCAtccCttg-ctcccctggctcttCTCACTGTCCATTAGGATCCAGCTGTTCTGCAAGGAGACATCAGCAT
i GCA_965140285.1.OZ223564.1        I 2 I 437
s GCA_033349115.1.JAVFKW010000008.1    513697 399 -   2470581 TTCATTTCAGGTTCTTCCTCAAACCATAGTCATCCTGGGGGC------CAGTTCCCCAAG---CTGCCTGC--CAGGTGTGCT-------G-----G----AGGGG----TAGGGGAAGG-----------------------ACTGCCTGAATAGCCAGGATCTGGGATCTCCCTGAGT------TCCAGGGAAgtactccatatcatcccagtgcatactgtccttgttttccccataccccagtgaaccccatcacagcgcagctccttagctg---tcttccatccctgtgccagaatagccccc--------ccatcccttccctgtccagttcttccttctcaggtgcaa-cccct-cCacttcccagtgggcactccca------------------catccttgccagggagcatccCtca-ctccccttgcccttctcaccattcattaggatccagctgttctgcatggatacatcagcgc
i GCA_033349115.1.JAVFKW010000008.1 I 2 C 0
s GCA_965140295.1.OZ223117.1          2576725 413 + 131075015 TTCATTTCACACTCTTACTCAAACAGTAGTCATCCTGGGGGC------CAGTTACCCAGG---CTGCCTGT--CTGgtgtgct-------gtgg--g----aggag-----------ggg----gagg--ag---------tgactGCCTGCACACCCAGGATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATACCATCTCAATGCATACAGTCCTTGTTCTCCCCATATCCCAGTGTCCTCCACCACAGCTCAGCTCCTTAGCTGTCCTCTTCCAACCCTGTGCCAGaacagcccccccA-acctccctccccccaccgtccagcccttccttctctggtgcaaCccccc-c-acttcccAGTGGGCACTCCCA------------------CATCTTTGCCAGGGAGCAtccCttg-ctcccctggctcttCTCACTGTCCATTAGGATCCAGCTGTTCTGCAAGGAGACATCAGCAT
i GCA_965140295.1.OZ223117.1        I 2 I 437
s GCA_032164245.1.JAVMKO010000006.1   1911059 391 - 106994437 ttcatttcaggctctTACTCAAACAGTAGTCATTCTGGGGGGG-----CAGTTACCCAGG---CTTCCTGC--CTggtgtgct-------gtgg--g----agggg----TGGGGAGagg----tggg--gG---------TGACAGCCTGATCAGACAGGATCTGGGATCTCCCTGCCT------TCCAGGGAAGTACCCCATATCAT--------------TCCTTGTTTTCCCTAAATCCCAGTGTCCTCCATCAAAGCTCAGctccttagctgtcctcttccatccctctgccagaacagccccatcC-cccaccgtcccctccctgtccagctcttccttctc-aatGCAA-CACCC----------------CATGCCCA------------------CATCCTTTCCAGGGAGCCTCCCTCA-CCTCCCTTACCCCCTTCACTGTCCATTGGGGTCCAGCTGTCCTGAAAGGAGACGTCATCGC
i GCA_032164245.1.JAVMKO010000006.1 I 194 C 0
s GCF_007399415.2.NC_044325.1       124924307 177 + 155918640 ttcatttcagactcttactcaaatagTAGTCATCCTGGGGGC------CAGTTCCCCAAG---CTGCCTGC--CCAGTGTGCTGGTAGGGGTGG--GTTGCGGGGG----GGGGGAGGAG----GGGGACAG---------TAACTGCCCGAATTACTAGGAACTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATATCATCCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_007399415.2.NC_044325.1       I 2 C 0
s GCF_025201925.1.NC_066621.1       124830992 181 - 162938067 TTCATTTCAGACTCTTACTCAAATAGTAGTCAGCCTGGGGGC------CAGTTCCCCAAG---CTGCCTGC--CCAGTGTGCTGGTATGAGTGG--GTTGCggggg----GGGGGGGgggACGGggggACGG---------TGACTGCCCGAATTACTAGGAACTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATATCATCCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_025201925.1.NC_066621.1       I 249 C 0
s GCA_045781085.1.CM099110.1          2259519 158 + 145055026 TTCATTTCAGACTCTTACTCAAATACTAGTCATCCTGGGGGC------CAGTTccccagg---ctgcctgc--ctgctgtgctGCTGG--ggtg--g-------------GG-----agg----agga---a---------tgaCTGCCTGAATACCCAGGATCTGGGATCTCCCTGAAT------TCCAGGGAAGTACTCCATATCATCCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_045781085.1.CM099110.1        I 2 C 0
s GCF_027887155.1.NC_071508.1         3500190 408 + 154637676 ttcatttcaggctcttactcaaacagtaatcatcctgggggc------CAGTTCCCCAGG---CTGCCTGC--CAGGTGTGCT-------GCCG--G-----GGGG----TGGGG---TG----GGGG--GGC--------TGACTGCCTGAATACCCAGCATCTGGGATCTCCCTGACT------TCCAGGGAAGTACTCCATATCATCCCAGTGCATACAGTCCTTGTTCTCCccataccccagtgtcctccaacacagcttagctccttagctgtcctcttccttccctgtgccagaacagtcccctcC---------cctcccaccgtccagcccttccttctcaggtgcaa-ccccc-c-acttcctagtgggcactccca------------------catccttgccagggagcatccCtca-ctcccctggcccttctcactgtccattagggtccagctgttctgcaaggagacgtcaggac
i GCF_027887155.1.NC_071508.1       I 2 C 0
s GCF_028017835.1.NC_088686.1         1955418 406 - 158421364 ttcatttcaggctcttactcaaacagtaatcatcctgggggc------cagttCCCCAGG---CTGCCTGC--CAGGTGTGCT-------GCCG--G-----GGTG----TGTG----TG----GGGG--GG---------TGACTGCCTGAATACCCAGCATCTGGGATCTCCCTGACT------TCCAGGGAAGtactccatatcatcccagtgcatacagtccttgttctccccataccccagtgtcctccatcacagctcagctccttagctgtcctcttccttccctgtgccagaacagtcccctcC---------cctcccaccgtccagcccttccttctcaggtgcaa-ccccc-c-acttcctagtgggcactccca------------------catccttgccagggagcatccCtca-ctcccatggcccttctcactgtccattaggattcagctgttctgcaaggagacgtcaggac
i GCF_028017835.1.NC_088686.1       I 2 C 0
s GCA_040894355.2.CM105055.1        111008127 370 + 311452600 TCCACTTCAGGCTCTTACTTAAACAGTCGTCATCCAGGGGTC------CAGTTCCCCAGG---CTGAATG------GTGTGTG-------GTGGATG----GGAGA-------------------------------------ACTGCCTGAATCCCCAGGATCTGGCATTTCCCTGGCT------TCCAGGGAAGTACTCCATATCATCCCAGTGCTTATATTCCTTGTTCTCACCCTACCCCAGCGTTCTCCACCACAGCGAagctccttctctatcctcttccatctctgttccaggacagccccc------------------------caccccttccttctgaggtgcaa-aCCCCGC-CCTTCCCAGTGGGTACTCCGATAGCCTCTCTGCGGAGAGCATCCTTGCCAGT-AGCATCCCTCA-CTCCACCTGCCCCTCTCACTGGTCGTTAGGATCCAGT------------------------
i GCA_040894355.2.CM105055.1        I 2 C 0
e GCA_033958435.1.CM066698.1          3485555   0 - 127301102 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7214 437 +     31630 gtaagcctctctgttgatccccctcccttaggccctctccggccattggatccacttctctgggttggagacaaaaggcatctccctcttatgttgctcctgccttcTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAACGGTAAGATCTCACTTTTGCCACATCGctagagccagttgggaattttccattgggatgatgttctggtagaaGAAACCTTTCTCACAAAATTTTAGG----GAGGAA--ATTTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAAG-GAcagctccct-ggctatcctcttgggaagctcgtgcc----aatctcgtgttctaccgacagatagaaagcgaaattgggaagagccttcttggccggtggccagccagccaaaaaaa---tccattttggttttcccaaaatgaaa--tgtttcagaatttctgtcc
s GCA_965152275.1.OZ223944.1          5062405 436 + 132879417 gtaagcctctctgctgctcccccttccttcagccctctccggccattggatccacttctctgggttggagacaaaaggcatctccctcttacgttgctcctgccttcTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAACAGTAAGATCTCACTTTTGCCACATCgctagagccagttgggaattttccattgggatgatgttctggtagaACAAACCTTTCTCACAAAATTTTAGG----GAGGAA--ATTTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAAG-GACAGCTCCCT-GGCTATCCTCTTGGGAAGCTCGTGCC----AATCTCGTGTTCTACCGACAGATAGAAAGCGaaattgggaagagccttcttggctggtggccagccatccaaaaaaa----ccattttggttttcccaaaatgaaa--tatttcagaatttctgtcc
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          3237798 436 + 134836623 gtaagcctctctgctgatccccctcccttcggccctctccggccattTGATCCACTTCTCTGGGTTGGAGCCAAAAGGCATTTCCCTCTTATGTTGCTCCTGCCTTCTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAATGGTAAGATCTCACTTCTGCCACATCGCTAGAGCCAGTTGGGAGTTTTCCATTGGGATGATGTTCTGGTAGAACAAACCTTTCTCACAAAATTTTAGG----GAGGAA--AACTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAA--GACAGGTTCCT-GGCTATCCTCTTGGGAAGCTCGTGCC----AATCTCGTGTTCTACCGACAGATAGAAAGTGAAATTGGGAAGAGCCTTCTTGGCAGGTGGCCAGCCaggcaaaaaaa---tccattttggttttcccaaaatggaa--tgtttcagaatttctgtcc
i GCA_965152235.1.OZ223887.1        I 1238 C 0
s GCF_009764565.3.NC_050073.1       128184669 464 - 131128815 gtaagcctctctgctgatcccccttccttcagccctctccggccattggatccgcttctctgggttggagccaaaaagcatctccctcttatgttgctcctgccttctttctcaccaTGCAAGGCCCAGTGATAGGGGTAACAGCTGTAAGATCTCACTTTTGCCACATCGCTAGAGCCAGTTGggaattttccattgggatgatcttctggtagaacatacctttctcacaaaattttagg----gaggaa--aatttt--ATTTTTGCTGA----TTTTTTTGTTTTT-------atttgccattggagaagtcaaaag-gacagctccct-ggctatcctcttgggaagttcgtgctTGGGaagctc-tgttctaccaacagagagaaagtgaaattgggaagagccttctaggtgggtggccagccagccaaaaaaa---tccattttgattttcccaaaatggaa--tgtttcagaatttctgtcc
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130121449 437 - 133850159 GTAAGCCTCTCTGCTGATCCCCCTCCCTTCGGCCctctccagccattggatccacTTCTCTGGGTTGGAGCCAAAAGGCATCTCCCTCTTATGTTGCTCCTGCCTTCTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAACAGTAAGATCTCACTTTTGCCACATCGCTAGAGAcagttgggaattttccattggGATGATGTTCTGGTAGAACAAACCTTTCTCACAAAATTTTAGG----GAGGAA--ATTTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAAG-GACAGCTTCCT-GGCTATCCTCTTAGGAAGCTTGTGCC----AATCTCTTGTTCTACCGACAGATAGAAAGTGAAATTGGGAAGAGCCTTCTTGGCGGGTGGCCAGCcagccaaaaaaa---tccattttggttttcccaaaatgaaa--tgtttcagaatttctgtcc
i GCA_965140235.1.OZ222813.1        C 0 I 51
s GCA_965140285.1.OZ223564.1        131478899 437 - 135739771 GTAAGCCTCTCTGCTGATCCCCCTCCCTTCGGCCCTCTCCGGCCATTGGATCCACTTCTCTGGGTTGGAGCCAAAAGGCATCTCCCTCTTATGTTGCTCCTGCCTTCTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAATGGTAAGATCTCACTTCTGCCACATTCCTAGAGCCAGTTGGGAGTTTTCCATTGGGATGATGTTCTGGTAGAACAAACCTTTCTCACAACATTTTAGG----GAGGAA--ATTTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAAG-GACAGCTTCCT-GGCTATCCTCTTGGGAAGCGAGTGCC----AATCTCGTCTTCTACCGACAGATAGAAAGTGAAATTGGGAAGAGCCTGCTTGGCGGGTGGCCAGAcagccaaaaaaa---tccattttggttttcccaaaatgaaa--tgtttcagaatttctgtcc
i GCA_965140285.1.OZ223564.1        I 6102 I 796
s GCA_033349115.1.JAVFKW010000008.1    514096 454 -   2470581 gtaagcctctctgctgctcccccttcctttggccctctccggccattggctccacttctctgggttggagccaaaagttatctccctcttatgttgctcctgccttcTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAGCAGTAAGATCTCACTTTTGCCTCATCGCTAGAGCCAGTTGGGAATTTTCCATTGCAATGATCTTCTGGTAGAACATACCTTTCTCACAACATTTTAGG----GAGG----ACATTTTTATTTTTGCTGA----TTTTT---TTTTTAAAA---ATT--CCATTGGAGAAATCAAAAG-GACAGCTCCCT-GGCTACCCTCTTAGAAAGCTCGTGCC----GATCGCGTGTTCTACCGAC--AGAGAAAATGAAATTGGTAAGAGCCTTCTAGACGGGTGGCCAGCCAGCC---AAAAAAATCCATTTTGtttttcccaacatggaa--tttttcagaatttct----
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 4
s GCA_965140295.1.OZ223117.1        128270712 437 - 131075015 GTAAGCCTCTCTGCTGATCCCCCTCCCTTCGGCCCTCTCCGGCCATTGGATCCACTTCTCTGGGTTGGAGCCAAAAGGCATCTCCCTCTTATGTTGCTCCTGCCTTCTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAATGGTAAGATCTCACTTCTGCCACATTCCTAGAGCCAGTTGGGAGTTTTCCATTGGGATGATGTTCTGGTAGAACAAACCTTTCTCACAACATTTTAGG----GAGGAA--ATTTTT-------------------------------------ATTTGCCATTGGAGAAGTCAAAAG-GACAGCTTCCT-GGCTATCCTCTTGGGAAGCGAGTGCC----AATCTCATCTTCTACCGACAGATAGAAAGTGAAATTGGGAAGAGCCTGCTTGGCGGGTGGCCAGAcagccaaaaaaa---tccattttggttttcccaaaatgaaa--tgtttcagaatttctgtcc
i GCA_965140295.1.OZ223117.1        I 6122 I 51
s GCA_032164245.1.JAVMKO010000006.1   1911450 460 - 106994437 GTAAGCCTCTCTGCTGCTCCCCCTTCCTTCGGCCCTCTCTGGCCATTGGTTCCACTTCTCTGGGCTGGGGCCAAAAGGCATCTCTCTCTTACGTTGCTCCTGCCTTCTTTCTCACCATGCAAGGCCCAGGGAGAGGGGTAACAGCAGTAAGATCTCACTTTCGCCACATcactagagccagttgggaattttccattgggatgctcttctgaaag----aaCCTTTCTCACAAAACTTTAGG----GAGGAT--TTTTTTGTGTGTGTGCTGA-------AT---TTAAAAAAAATAatt--ccattggagaagtc-aaag-gacggctccct-agctaccctcttggaaagtttgtgcc----aatctcatgttctgccaacagagagacagtgaaattgagaagaaccttctaggcaggtagccagccagccaaaaaaaAAAtccattttgtttttcccaacatggaa--tttttcagaatttctgccc
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 512
s GCF_027887155.1.NC_071508.1         3500598 451 + 154637676 ataagcctctctgctgctccaccttccttcggccctctctggacattggctgcacttctctgggttggagccaaaaggcatctccctcttatgttgctcctgccttcTTTCTCACCATGCAAGGCCCAGTGACAGGGGTAACAGCAGCAAGATCTCACTTTTCCCTCATCACTGgagccagttgggaattttccattgggatgatcttctggtagaacatacctttctcacaaaattttagg----gaggaa--attttt--ATTTTTGCTGA----TTTTT---TTTT-------------ccattggagaagtcgaaag-gaCAGGACTC--AGCTACCTTCTTGGAAAGTCCGTGCC----AATCTCGTgttctaccaacagagaggaaatgaaattgggaagagccttctaggcgggtggccagtcagccaaaaaac---tccattttggttttcccaaaatggaa--tttttcagaatttccctcc
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1955824 452 - 158421364 ataagcctctctgctgctccaccttccttcggccctctctggacattggctccacttctctgagttggagccataaggcatctccctcttatgttgctcctgccttcTTTCTCACCATGCAAGGCCCAGTGACAGGGGCAACAGCAGCAAGATCTCACTTTTCCCTCATCACTAGagccagttgggaattttccattgggatgatcttctggtagaacatacctttctcacaaaattttagg----gaggaa--attttt--ATTTTTGCTGA----TTTTT---TTTTT------------ccattggagaagtcgaaag-gaCAGGACTC--AGCTACCTTCTTGGAAAGTCCGTGCC----AATCTCGTGTTCTACCAACAGAGAggaaatgaaattgggaagagccttctaggcgggtggccagtcagccaaaaaaa---tccattttggttttcccaaaatggaa--tttttcagaatttcccgcc
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3485555  21 - 127301102 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--TTTTTCAGTGTTTCTCTCC
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111008497 456 + 311452600 ------CTCTCTGCTGTTCCCCCTTCCTTTGAACCACTCTGGCCATTGGCTCCACTTCTCCAGGTTGGAGCCAGAAGGCATCTCTCTCTTATGCTTCTCCTGCCTTCTTTCTCACCATGCAAGACACAGTGATTGGTATAAGGACAGTAAGATCTCACTTTTGCCTCAACTC-AGAGCCAGTTGGGGATCTTccattggaatgattttctgGTAGAACATACACTTCCCACAACATTTTATGGGAAGGGgga--actttt--ATTTTTACTGAAAATTTTTG---ATTTT------------ccattggagaaatcaaaca-aacAGCTCCC-TGGCTATCCCTTTGGAAAGCTCTTCCC----AATCTTGTGTTCTACTGACAGAGAGAAAGTAAAATTgtgaagagccttccaggtgggtggccagccagccaaaaaat---tcaatttttgttttcccaaaatggaaTTtttttcagactttctgtct
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCA_045781085.1.CM099110.1          2259677   0 + 145055026 C
e GCF_025201925.1.NC_066621.1       124831173   0 - 162938067 C
e GCF_007399415.2.NC_044325.1       124924484   0 + 155918640 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7651 51 +     31630 cacaaagtattttgagatgtt--aactttttgtcctgagttaggatggttc--------------tt
s GCA_965152275.1.OZ223944.1          4551926 51 + 132879417 cacaaagtattttgagatgtt--aactttttgtcctgagttaggatggttc--------------tt
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1          3238234 51 + 134836623 cacaaagtattttgagatgtt--aactttttgtcctgagttaggatggttc--------------tt
i GCA_965152235.1.OZ223887.1        C 0 I 81
s GCF_009764565.3.NC_050073.1       128185133 51 - 131128815 cacaaagtattttgagatgtt--aactttttgtcctgagttgggatggttc--------------tt
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3520619 51 + 133850159 cacaaagtattttgagatgTT--AACTTTTTGTCCTGAGTTAGGATggttc--------------tt
i GCA_965140235.1.OZ222813.1        I 1481 I 298
s GCA_965140285.1.OZ223564.1          3884779 51 + 135739771 cacaaagtaTTTTGAGATGTT--AACTTTTTGTCCTGAGTTAGGATGGTTC--------------TT
i GCA_965140285.1.OZ223564.1        I 437 C 0
s GCA_033349115.1.JAVFKW010000008.1    514554 51 -   2470581 cacaaagtATTTTGAGA--TTTAAACGTTTTGTCCTGAGTTAGGATGATTC--------------TT
i GCA_033349115.1.JAVFKW010000008.1 I 4 C 0
s GCA_965140295.1.OZ223117.1          2577575 51 + 131075015 cacaaagtaTTTTGAGATGTT--AACTTTTTGTCCTGAGTTAGGATGGTTC--------------TT
i GCA_965140295.1.OZ223117.1        I 437 I 81
s GCA_032164245.1.JAVMKO010000006.1  95611122 53 + 106994437 cacaaagtattttgagattttTTaactttttgtcctgagttaggatgatcc--------------tt
i GCA_032164245.1.JAVMKO010000006.1 I 839 T 11825
s GCF_007399415.2.NC_044325.1       124924484 40 + 155918640 ---------------------------TATTGTCCTGAATTAGGATGATTCGGGGTTTTTTGCTTtt
i GCF_007399415.2.NC_044325.1       C 0 I 9
s GCF_025201925.1.NC_066621.1       124831173 40 - 162938067 ---------------------------TATTGTCCTGAAATAGGATGATTCGGGGTTTTTTGGTTtt
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099110.1          2259677 23 + 145055026 ---------------------------TATCGTCCTGAGTTAGGATGACT-----------------
i GCA_045781085.1.CM099110.1        C 0 I 3
s GCF_027887155.1.NC_071508.1         3501049 51 + 154637676 cacaaagtattttgagatttt--aactttttgtcctgagttaggatgatta--------------tt
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1956276 49 - 158421364 cacaaagtattttgagatttt--aactttttgtcctgagttaggatgatta----------------
i GCF_028017835.1.NC_088686.1       C 0 I 1
s GCA_033958435.1.CM066698.1          3485576 44 - 127301102 CACAAAATATACTGACATTTT--AACGTTTTGTGCCGCGTTATGAT---------------------
i GCA_033958435.1.CM066698.1        C 0 I 1
s GCA_040894355.2.CM105055.1        111008953 51 + 311452600 cacaaaatattttgaggtttt--aactttttgtcctgagttaggattaatt--------------tt
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7702 80 +     31630 c----------tttttt-t-ga-------------------aatctcaacattttccataggaaagaaattccattttcaggccagctcCTCTCACTTCTATTTATTATTA
s GCA_965152275.1.OZ223944.1          5062892 80 + 132879417 c----------tttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcctctcactTCTGTTTATTATTA
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1        120601102 80 - 134836623 c----------tttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcctctcacttctatttattatta
i GCA_965152235.1.OZ223887.1        I 484 I 23
s GCF_009764565.3.NC_050073.1       128185184 81 - 131128815 cT---------tttttt-t-ga-------------------aatctcaacattttccacaggagagaaattccattttcAGGCCAGCTCCTCTCACTTCTATTTATTATTA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130121937 80 - 133850159 c----------tttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcagGCCAGCTCCTCTCACTTCTATTTATTATTA
i GCA_965140235.1.OZ222813.1        I 51 I 668
s GCA_965140285.1.OZ223564.1          3884830 81 + 135739771 CT---------tttttt-t-GA-------------------AGTCTCAACATTTTCCATAGGAGAGAAATTCCATTTTTAGGCTAGCTCCTCTCACTTCTATTTATTATTA
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    514605 66 -   2470581 CT---------TTTTTTCT-GA-------------------AACCTCAACATT----------------TTCCATTTTTAGGCCAGCTCCTCTCACTTCTATTTATTATTA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128271200 80 - 131075015 C----------tttttt-t-GA-------------------GATCTCAACATTTTCCATAGGAGAGAAATTCCATTTTCAGGCCAGCTCCTCTCACTTCTATTTATTATTA
i GCA_965140295.1.OZ223117.1        I 51 I 668
s GCA_032164245.1.JAVMKO010000006.1  95599350 80 + 106994437 c----------cttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcctctcacttctatttattatta
i GCA_032164245.1.JAVMKO010000006.1 T 11825 C 0
s GCF_007399415.2.NC_044325.1       124924533 90 + 155918640 gTTTTTTTTTTtttttt-g-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcctctcacttctattcattatta
i GCF_007399415.2.NC_044325.1       I 9 I 46384
s GCF_025201925.1.NC_066621.1       124831213 90 - 162938067 gTTTTGTTTTTtttttt-g-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcCTCTCACTTCTATTCATTATTA
i GCF_025201925.1.NC_066621.1       C 0 I 30807
s GCA_045781085.1.CM099110.1          2259703 70 + 145055026 -----------TTT------------------------------CTCAACATTTTCCATCGGGGAGAAGTTCCATTTTCAGGCCAGCTCCTCTCACTTCTATTTATTATTA
i GCA_045781085.1.CM099110.1        I 3 C 0
s GCF_027887155.1.NC_071508.1         3501100 81 + 154637676 tT---------tttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcCTCTCACTTCTGTTTATTATTA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1956326 79 - 158421364 -----------tttttt-t-ga-------------------aatctcaacattttccataggagagaaattccattttcaggccagctcCTCTCACTTCTGTTTATTATTA
i GCF_028017835.1.NC_088686.1       I 1 C 0
s GCA_030020295.1.CM057590.1        133021790  2 - 312449569 -------------------------------------------------------------------------------------------------------------TA
i GCA_030020295.1.CM057590.1        N 0 C 0
s GCA_033958435.1.CM066698.1          3485621 79 - 127301102 -----------TTTTTT-T-GA-------------------TACCTCAACATTTTCCATAGGAGACAAATCCCATTTTCAGGACAACGCTTCTCGCTTCTACTTATTATTA
i GCA_033958435.1.CM066698.1        I 1 I 640
s GCF_030867095.1.NC_081825.1       133386489  2 - 307635815 -------------------------------------------------------------------------------------------------------------TA
i GCF_030867095.1.NC_081825.1       N 0 C 0
s GCA_040894355.2.CM105055.1        111009004 77 + 311452600 tA---------tttt------a-------------------accctcaacattttccataggagagaaattccattttcaggccagctctactcatttctatttattatta
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7782 7 +     31630 AATCATG
s GCA_965152275.1.OZ223944.1          4552054 7 + 132879417 AATCATG
i GCA_965152275.1.OZ223944.1        n 0 C 0
s GCA_965152235.1.OZ223887.1          3238366 7 + 134836623 aatcATG
i GCA_965152235.1.OZ223887.1        I 81 C 0
s GCF_009764565.3.NC_050073.1       128185265 7 - 131128815 AATCATG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3520968 7 + 133850159 AATCATG
i GCA_965140235.1.OZ222813.1        I 298 C 0
s GCA_965140285.1.OZ223564.1          3884911 7 + 135739771 AATCATG
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    514671 7 -   2470581 AACCATG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2577707 7 + 131075015 AATCATG
i GCA_965140295.1.OZ223117.1        I 81 C 0
s GCA_032164245.1.JAVMKO010000006.1  95599430 7 + 106994437 aatcatg
i GCA_032164245.1.JAVMKO010000006.1 C 0 C 0
s GCF_007399415.2.NC_044325.1       124971007 7 + 155918640 AATCATG
i GCF_007399415.2.NC_044325.1       I 46384 T 46384
s GCF_025201925.1.NC_066621.1         3087271 7 + 162938067 AATCATG
i GCF_025201925.1.NC_066621.1       I 9514 C 0
s GCA_045781085.1.CM099110.1          2259773 7 + 145055026 AATCATG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3501181 7 + 154637676 AATCATG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1956405 7 - 158421364 AATCATG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133021792 7 - 312449569 AAGCTTG
i GCA_030020295.1.CM057590.1        C 0 I 33543
s GCA_033958435.1.CM066698.1          3486340 7 - 127301102 gATCATG
i GCA_033958435.1.CM066698.1        I 640 C 0
s GCF_030867095.1.NC_081825.1       133386491 7 - 307635815 AAGCTTG
i GCF_030867095.1.NC_081825.1       C 0 I 11905
s GCA_040894355.2.CM105055.1        111009081 7 + 311452600 aatcatg
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7789 16 +     31630 AAACTCATCCTCTCAG
s GCA_965152275.1.OZ223944.1          4552061 16 + 132879417 AAACTCATCCTCTCAG
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3238373 16 + 134836623 AAACTCATCCTCTCAG
i GCA_965152235.1.OZ223887.1        C 0 n 0
s GCF_009764565.3.NC_050073.1       128185272 16 - 131128815 AAACTCATCCTCTCAG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3520975 16 + 133850159 AAACTCATCCTCTCAG
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3884918 16 + 135739771 AAACTCATCCTCTCAG
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    514678 16 -   2470581 AAATTCATCCTCTCAG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2577714 16 + 131075015 AAACTCATCCTCTCAG
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95599437 16 + 106994437 aaactcatcctctcag
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 645
s GCF_007399415.2.NC_044325.1       124924630 16 + 155918640 aaactcagcctctcag
i GCF_007399415.2.NC_044325.1       T 46384 I 47032
s GCF_025201925.1.NC_066621.1         3087278 16 + 162938067 AAACTCAGCCTCTCAG
i GCF_025201925.1.NC_066621.1       C 0 T 9239
s GCA_045781085.1.CM099110.1          2259780 16 + 145055026 AAATTCATCATGTCAG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3501188 16 + 154637676 AAACTCATCCTCTCAG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1956412 16 - 158421364 AAACTCATCCTCTCAG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133055342 16 - 312449569 CAATTCATCCTATCAG
i GCA_030020295.1.CM057590.1        I 33543 C 0
s GCA_033958435.1.CM066698.1          3486347 16 - 127301102 AGACACATGCCCACAA
i GCA_033958435.1.CM066698.1        C 0 I 294
s GCF_030867095.1.NC_081825.1       133398403 16 - 307635815 CAATTCATCCTTTCAG
i GCF_030867095.1.NC_081825.1       I 11905 C 0
s GCA_040894355.2.CM105055.1        111009088 16 + 311452600 aaactcatcccctcaa
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         7805 645 +     31630  
s GCA_965152275.1.OZ223944.1          4552077 645 + 132879417  
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1        120601205 645 - 134836623  
i GCA_965152235.1.OZ223887.1        I 23 I 398
s GCF_009764565.3.NC_050073.1       128185288 645 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3520991 645 + 133850159  
i GCA_965140235.1.OZ222813.1        C 0 I 394
s GCA_965140285.1.OZ223564.1          3884934 645 + 135739771  
i GCA_965140285.1.OZ223564.1        C 0 I 394
s GCA_033349115.1.JAVFKW010000008.1    514694 644 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2577730 645 + 131075015  
i GCA_965140295.1.OZ223117.1        C 0 I 394
s GCA_032164245.1.JAVMKO010000006.1   1912422 645 - 106994437  
i GCA_032164245.1.JAVMKO010000006.1 I 512 I 1018
s GCF_007399415.2.NC_044325.1         1430398 645 - 155918640  
i GCF_007399415.2.NC_044325.1       I 1203 I 389
s GCF_025201925.1.NC_066621.1         3078055 644 + 162938067  
i GCF_025201925.1.NC_066621.1       T 9239 I 385
s GCA_045781085.1.CM099110.1          2259796 645 + 145055026  
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3501204 645 + 154637676  
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1956428 645 - 158421364  
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133055358 642 - 312449569  
i GCA_030020295.1.CM057590.1        C 0 I 3
s GCA_033958435.1.CM066698.1          3486657 645 - 127301102  
i GCA_033958435.1.CM066698.1        I 294 C 0
s GCF_030867095.1.NC_081825.1       133398419 642 - 307635815  
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111009104 645 + 311452600  
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         8450 394 +     31630 ttgcgtggcacacccagcaaaggaaatgactttactctttgctaagaagttcaccagtgccttaggggcaataatggaggagtaagtgatgtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcaatcctgattaaagagatcatgctgagattccccacaaggctcatggtgtagataagcaaaaacatcccaaagaggacagcttgcagtgatcggctgcctttgaatcctagaaggttgaacacggacactccagtgtgattgccatgcaccatgtattccaGATGCGATTGACGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGCTAAAGCT------TATGATTC--AAAATTAACC--------GTATGGGGCTGGGAG
s GCA_965152275.1.OZ223944.1          5063640 394 + 132879417 ttgcgtggcacacccagcaaaggaaatgactttactctctgttaagaagttcaccagtgccttagggacaataatggaggagtaagtgatgtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcgatcctgattaaagagatcatgctgagattccccgcaaggctcatggtgtagataagcaaaaacatcccaaagaggacagcttgcagtgatcggctgcctttgaatcctagaaggttgaacacggacactccagtgtaattgccATGCACCATATATTCCAGATGCGATCGACGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCT------TATGATTC--AAAATTAACC--------ATATGGGGCTGGGAG
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1          5528033 394 + 134836623 TTGCGTGGCACACCCAGCAAAGGAAATGACTTTACTCTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAATGGAGGAGTAAGTGATGTCTACAAGGGACAAGTTGCTGAGGAAAAAATACATGGGGGTGTGTAGCCGCGTCTCGATCCTGATTAAAGAGATCATGCTGAGATTCCCCGCAAGGCTCATGGTGTAGATAAGCAAAAACATCCCAAAGAGGACAGCTTGCACTGACTGGCTGCCTTTGAATCCTAGAAGGATGAACACAGACACTCCAGTGTGATTGCCATGCGCCATGTATTCCAGATGCCATCAACGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGGTAAAGCT------TATGATTC--AAAATTAACC--------gtatggggctgggag
i GCA_965152235.1.OZ223887.1        n 398 n 398
s GCF_009764565.3.NC_050073.1       128185933 394 - 131128815 ttgcgtggcacacccagcaaaggaaatgactttactctctgctaagaagttcaccagtgccttaggggcaataatggaggagtaagtgacgtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtcttgatcctgattaaagagatcatgctgagattccctgcaaggctcatggtgtagataagcaaaaacatcccaaagaggacagcttgcagtgatcggctgcctttgaatcctagaaggatgaacacggacactccagtgtgattgccatgccccatATATTCCAGATGCGATCGACGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCT------TATGATAC--AAGATTAACC--------ATATGGGGCTGGGAG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130122685 394 - 133850159 TTGCGTGGCACACCCAGCAAAGGAAATGACTTTACTCTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAATGGAGGAGTAAGTGATGTCTACAAGGGACAAGTTGCTGAGGAAAAAATACATGGGGGTGTGTAGCCGCGTCTCGATCCTGATTAAAGAGATCATGCTGAGATTCCCCGCCAGGCTCATGGTGTAGATAAGCAAAAACATCCCAAAGAGGACAGCTTGCACTGATCGGCTGCCTTTGAATCCTAGAAGGATGAACACGGACACTCCAGTGTGATTGCCATGCGCCATGTATTCCAGATGCGATCAGCGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCT------TATGATTC--AAAATTAACC--------GTATGGGGCTGGTTG
i GCA_965140235.1.OZ222813.1        I 668 I 238
s GCA_965140285.1.OZ223564.1        131480132 394 - 135739771 TTGCGTGGCACACCCAGCAAAGGAAATGACTTTACTCTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAATGGAGGAGTAAGTGATGTCTACAAGGGACAAGTTGCTGAGGAAAAAATACATGGGGGTGTGTAGCCGCCTCTCAATCCTGATTAAAGAGATCATGCTCAGATTCCCCGCAAGACTCATGGTGTAGATAAGCAAAAACATCCCAAAGAGGACAGCTTGCAGTGATCGGCTGCCTTTGAATCCTAGAAGGATGAACACGGACACTCCAGTGTGATTGCCATGCGCCatgtattccagatgagatcaaAGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCT------TATGATTC--AAAATTAACC--------GTATGGGGCTGGTTG
i GCA_965140285.1.OZ223564.1        I 796 I 458
s GCA_033349115.1.JAVFKW010000008.1    515338 394 -   2470581 ttgcatggcgcacccagcaaaggagatgactttactctctgctaagaagttcaccagtgtcttagggacaatagtggaagagtacgtgatgtcgacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcgatcctgattaaagagatcatgctgagattccccactaggctcatggtgtagataagcaaaaacatcccaaagaggacagcttgcagtgatcgactgcctttgaatcctagaaggatgaacacggacactccagtgtgattGCCATGCGCCATATATTCCAGATGCGATCGATGCTATTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCG------TATGATTC--AAGATTAACC--------ATATGGGGCTGGGAG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128271948 394 - 131075015 TTGCGTGGCACACCCAGCAAAGGAAATGACTTTACTCTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAATGGAGGAGTAAGTGATGTCTACAAGGGACAAGTTGCTGAGGAAAAAATACATGGGGGTGTGTAGCCGCCTCTCAATCCTGATTAAAGAGATCATGCTCAGATTCCCCGCAAGACTCATGGTGTAGATAAGCAAAAACATCCCAAAGAGGACAGCTTGCAGTGATCGGCTGCCTTTGAATCCTAGAAGGATGAACACGGACACTCCAGTGTGATTGCCATGCGCCatgtattccagatgagatcaaAGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGATAAAGCT------TATGATTC--AAAATTAACC--------GTATGGGGCTGGTTG
i GCA_965140295.1.OZ223117.1        I 668 I 458
s GCA_032164245.1.JAVMKO010000006.1  95600098 392 + 106994437 ttgcgtggcacacccagcaaaggaaatgacttgactctctgcgaagaagttcaccagtgccttaggggcaataacagaagagtacgtgaggtctacaagggacaagttgctcaggaaaaaatacatgggggtgtgtagccgtgtttcgatcctgattaaagagagcatgctgagattccccactaggctcatggtgtagataatcaaaaacatcCCAAAGAGGACAGCTTGCACTGATCGACCACCTTTGAATCCTAGAAGGATGAATGCAGACACTCCAGTGTGATTGCCATGTGCCATATATTCCAGATGCAATCAATGCTGTTGGGGTGGAG-GAAAGAAACACAGCCAAGATAAAATT--------TGAGTC--AAGATTAATT--------GTATGGGGCTGGGAG
i GCA_032164245.1.JAVMKO010000006.1 I 645 C 0
s GCF_007399415.2.NC_044325.1       124971678 385 + 155918640 ttgcgtggcacacccagcaaaggaaatgactttcctctctgctaagaagttcaccagtgccttaggggcaataatggaagagtaagtgatgtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcgatcctgattaaagagatcatgctgaggttccccgctaggctcatgctgtagataagcaaaaacatcccaaagagaacagcttgcagtgatctactgcctttgaatcctagaaggatgaacactgagactccagtgtgattgccatgcgccataCATTCCA---------GATCCTGTTGGGGTAAAA-AAAAGAAAAACAGCCAAGGTACAGTT------TATGATTC--AAGATTTACC--------GAAGGGGACTGGGAG
i GCF_007399415.2.NC_044325.1       I 47032 C 0
s GCF_025201925.1.NC_066621.1       124862110 385 - 162938067 ttgcgtggcgcacccagcaaaggaaatgactttcctctctgctaagaagttcaccagtgccttaggggcaataatggaagagtaagtgatgtctacaagggacaagctgctgaggaaaaaatacatgggggtgtgtagccgcatctcgatcctgattaaagagatcatgctgaggttccccgctaggctcatgctgtagataagcaaaaacatcccaaagagaacagcttgcagcgatctactgcctttgaatcctagaaggatgaacactgagagtccagtgtgattgccATGCGCCATATATTCCA---------GATCCTGTTGGGGTAAAA-GAAAGAAAAACAGCCAAGGTACAGTT------TGTGATTC--AAGATTTACC--------GAAGGGGACTGGGAG
i GCF_025201925.1.NC_066621.1       I 30807 I 224
s GCA_045781085.1.CM099110.1          2260441 385 + 145055026 TTGCGTGGCGCACCCAGCAAAGGAAATCACTTTCCTCTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAACGGAAGAGTAAGTGATGTCTACAAGggacaagttgctgaggaaaaaaTACATGGGGGTGTGTAGCCGCGTCTCGATCCTGATTAAAGAGATCATGCTGAGGTTCCCCGCTAGGCTCATGCTGTAGATAACCAAAAACATCCCAAAGAGAACAGCTTGCAGCGATCGACTGCCGTTGAATCCTAGAAGGATGAAGACCGACACTCCGGTGTGATTGCCATGCGCCATATATTCCA---------GGTGCTGTTGGggtaaaa-gaaagaaatacagCTAAGGTAAAGTT------TATGATTC--AAGATTAACT--------GAATGGGACTGGGAG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3501849 394 + 154637676 ttgcgtggcacacccagcaaaggaaatgactttactctctgctaagaagttcaccagtgccttaggggcaataatggaagagtaagtgaggtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcgatcctgatcaaagagatcatgctgagattccccgctaggctcatactgtagataagcaaaaacatcccaaagaggacagcttgcagcgatcgactgcctttgaatcctagaaggatgaaCGTGGACACTCCAGTATGATTGCCATGCGCCATATATTCCAGGTGCGATCGATGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGGTAAAGCT------TATGATTC--AAGATGAACT--------GCATGGGGCTGGGAG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1957073 394 - 158421364 ttgcgtggcacacccagcaaaggaaatgactttactctctgctaagaagttcaccagtgccttaggggcaataatggaagagtaagtgatgtctacaagggacaagttgctgaggaaaaaatacatgggggtgtgtagccgcgtctcgatcctgattaaagagatcatgctgagattccccgctaggctcatgctgtagataagcaaaaacatcccaaagaggacagcttgcagtgatcgactgcctttgaatcctagaaggatgaacatggacactccagtatgattGCCATGTGCCATATATTCCAGGTGCGATCGATGCTGTTGGGGTAGAA-GAAAGAAACACAGCCAAGGTAAAGCT------TATGATTC--AAGATTAACT--------GCATGGGGCTGGGAG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133056003 408 - 312449569 ttgtgcagcacagccagtgaatgagatgacttttcttgcagctaaggaaatcattagtgttttaggcgcaataacagtagaataagtgagatctacaaaggacaggttatgaaggaaaaaatacatgggggtgtgtagccgggactcaatgctgatgaatgtgatcatgccaagatttgctaccaggctcacagtatagatccccaaaatcatcgcaaagaggaggatttgtagcTGGTGGTTGTCTATGAAACCAAGGAGTATGAACTCTGTCACTTCAGTCAGATTTCCCTTCACCATTTATTTCAGATGTGCTCTGTGCTACTGAGGCAGAA-AAGGGAAAAACAACTCAGACAGAGACAGAAAAGATATTTT--AAAATAGAACTTTTGAAGAGATGGCAAATGGGA
i GCA_030020295.1.CM057590.1        I 3 C 0
s GCA_033958435.1.CM066698.1          3487302 395 - 127301102 ttgtgtgacacacccggcaaaggaaataactttatgctccactaaaaagttcgttagggccttaggggcaataatggaagagtaagtgatgtcaaccagggacaagttgctaaggaaaaaatacatgggggtatgcagccgtgtctcaatcctgattaatgtgatcatgctgaggttccccaccaggctcatggtgtagataaggagaaacatcccaaagaggacaacttgcagagaccgactgcctgggaatcccagaaggatgaacACGGATACTCCAGTGCGATTACCATGTGCCATATAGTCCAGATGTGATCAGCACTGCTGGGGTGGAACTAAAAAGAAACAGTCAAGATAAAGCT------TATGATTC--AAAATTGACC--------ATATGAGTATGGGAG
i GCA_033958435.1.CM066698.1        C 0 I 165
s GCF_030867095.1.NC_081825.1       133399061 408 - 307635815 ttgtgcaatgcagccagcgaatgagatgacttttcttgcagctaagaaattcattagtgttttaggtgcaataacagtagaataagtgagatctacaaaggacaggttacgaaggaaaaaatacatgggggtgtgtagctgagactcaatgctgatgagcgtgatcatgccaagatttgctaccaggcttagagtatacatccccaaaatcatcacaaagaggaggatttgtagctggtggttgtctgtgaaaccaaggaggatgaactctgtcacttcagtcagatttcccatCACCATTTATTTCAGATGTCCTCTGTGCTACTGAGGCAGAA-AAGGGAAAACCAACTCAAACAGAGACAGAAAAGATATTTT--AAAATAGCACTTTTGAAGAGATGGCAAATGGGA
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111009749 393 + 311452600 TTGCGTGGCACACCCAGCAAAGGAAATGACTTTACTGTCTGCTAAGAAGTTCACCAGTGCCTTAGGGGCAATAATGGAAGTGTAAGTGATGTctacaaaggacaagttgctgaggaaaaaatacatgggggtgtgtagCCGCAGCTCGATCCTGATTAAAGTGATCATGCAGAGATTCCCCGCTAGGCTCAGGGTGTAGATAATCAAAAACATCACAAAGAGGACAGCTTGCAGCTGACGACTGCCTGTGAATCCTAGGAGGATGAACATGGACACTCCAGTGTGATTGCCATGCACCATATAGTCCAGATGTGATCTATGCTGTTGGGGCAGAA-GAAACAAACACAG-CAAGATAAAGTT------TATACTTC--AAGATGAACC--------ATATGGGGCCGGGAG
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         8844 4 +     31630 GTGG
s GCA_965152275.1.OZ223944.1          4553118 4 + 132879417 GTGG
i GCA_965152275.1.OZ223944.1        n 0 C 0
s GCA_965152235.1.OZ223887.1          3239428 4 + 134836623 gtgg
i GCA_965152235.1.OZ223887.1        n 398 n 398
s GCF_009764565.3.NC_050073.1       128186327 4 - 131128815 GTGG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522030 4 + 133850159 GTGG
i GCA_965140235.1.OZ222813.1        I 394 C 0
s GCA_965140285.1.OZ223564.1          3885973 4 + 135739771 GTGG
i GCA_965140285.1.OZ223564.1        I 394 C 0
s GCA_033349115.1.JAVFKW010000008.1    515732 4 -   2470581 GTGG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2578769 4 + 131075015 GTGG
i GCA_965140295.1.OZ223117.1        I 394 C 0
s GCA_032164245.1.JAVMKO010000006.1  95600490 4 + 106994437 GTGG
i GCA_032164245.1.JAVMKO010000006.1 C 0 C 0
s GCF_007399415.2.NC_044325.1       124972063 4 + 155918640 GTGG
i GCF_007399415.2.NC_044325.1       C 0 I 221
s GCF_025201925.1.NC_066621.1         3079084 4 + 162938067 GTGG
i GCF_025201925.1.NC_066621.1       I 385 C 0
s GCA_045781085.1.CM099110.1          2260826 4 + 145055026 GTGG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3502243 4 + 154637676 GTGG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1957467 4 - 158421364 GTGG
i GCF_028017835.1.NC_088686.1       C 0 I 32
s GCA_030020295.1.CM057590.1        133056411 4 - 312449569 GTGG
i GCA_030020295.1.CM057590.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3487862 4 - 127301102 GTGA
i GCA_033958435.1.CM066698.1        I 165 C 0
s GCF_030867095.1.NC_081825.1       133399469 4 - 307635815 GTGG
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111010142 4 + 311452600 GTGG
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         8848 234 +     31630 ACACCACCATTGTGAAATACAGTAAAAAGCCAAGA-T-ACA----AAAAACAAGTTATGCTGTTCTGGCTGTGTAACATTTGCAAACTTAAAATA-----------------ATTT-----CATGTGCGTCCATATAATTG--CCAAGA-TTTTACTCCTTTT-AAAGAAAAGAGATG---------------ATAAAATA-AA-ACAAAATTGA---AAATTCTGAAGTGATCTTTCTAAGTCTGCATCCCAAACAGGCATT----GG----------CA-T------TTGCTAATATCTCTTC--------AT
s GCA_965152275.1.OZ223944.1          4553122 234 + 132879417 ACACCACCATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAAATAAGTTATGCTGTTCTGGCTGTGTAACATTTGCAAACTTAAAATA-----------------ATTT-----CATGTGCGTCCGTATAATTG--CCAAGA-TTTTACTCCTTTT-AAAGAAAAGAGATG---------------ATAAAATA-AA-ATAAAATTGA---AAATTCTGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GT----------CA-T------TTGCTAATATCTCTTC--------AT
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1        120602248 234 - 134836623 ACACCACCATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAAATAAGTTATGCTATTCTGGCTGTGTAACATTTGAaaacttaaaata-----------------attt-----catGTGCGTCTGTATAATTG--CCAAGA-TTTTActcctttt-aaagaaaagagatg---------------ataaaata-aa-ataaaattga---aaattctGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GG----------CA-T------TTGCTAATATCTCTTC--------AT
i GCA_965152235.1.OZ223887.1        I 398 C 0
s GCF_009764565.3.NC_050073.1       128186331 229 - 131128815 ATACCACCATTGTGAAATACAGTAGAAAGCCAAAA-T-ACA----AAAAACAAGTTAGGCTGTTCTGGCTGTGTAACATTTGCAAACTTAAAATA-----------------ATTG-----CATGTGCGTCTGTATAATTG--CCAAGA-TTTTACTCCTTTT-AAAGAAAACAGATG---------------ATAA------A-ATAAAATTGA---AAATTCTGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GG----------CA-T------TTGCTAATATCTCTTC--------AT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522034 234 + 133850159 ACACCACCATTGTGAAATACAGTAGAAAGCCAaga-t-aaa----aaaaataagttatgtTGTTCTGGCTGCGTAACATTTGAAAACTTAAAATA-----------------ATTT-----CATGTGCGTCTGTATAATTG--CCAAGA-TTTTActcctttt-aaagaaaagagatg---------------ataaaata-aa-ataaaattga---aaattcTGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GG----------CA-T------TTGCTAATATCTTTTC--------AT
i GCA_965140235.1.OZ222813.1        C 0 I 220
s GCA_965140285.1.OZ223564.1          3885977 234 + 135739771 ACACCACCATTGTGAAATACAGTAGAAAGCCaaga-t-aaa----aaaaataagttatgtTGTTCTGGCTGCGTAACATTTGAAAACTTAAAATA-----------------ATTT-----CATGTGCATCTTTATAATTG--CCAAGA-TTTTActcctttt-aaagaaaagagatg---------------ataaaata-aa-ataaaattga---aaattctGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GG----------CA-T------TTGCTAATATCTTTTC--------AT
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    515736 227 -   2470581 ATATCGCTATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAGCCAAGTGGTGCTGTTCTGGTTGTGTGACATTTGCAAACTTAAACTA-----------------ATTT-----CATGTGAGTCTGTGTAATTG--CCAAGA-TTTTGCTCCTTTT-AAAGAAAAGAGATT---------------ATAAAATA-AATATAAAAT--A---AAAGTCT------ATATCCCAAAGTCTGAATCCCTAGCAGACATT----GG----------CA-T------TTGCTAATATCACTTC--------AT
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2578773 234 + 131075015 ACACCACCATTGTGAAATACAGTAGAAAGCCaaga-t-aaa----aaaaataagttatgtTGTTCTGGCTGCGTAACATTTGAAAACTTAAAATA-----------------ATTT-----CATGTGCATCTTTATAATTG--CCAAGA-TTTTActcctttt-aaagaaaagagatg---------------ataaaata-aa-ataaaattga---aaattctGAAGTGATCTTTCTAAGTCTGCATCCCAAGCAGGCATT----GG----------CA-T------TTGCTAATATCTTTTC--------AT
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95600494 213 + 106994437 ATATGGC------GAAATATAGTAGAAAGCCCAGA-T-ACA----AAAGCTAAGTTATGCTGTTCCAGTTATGTGACATTTGCGAACTTAAACTA-----------------ATTT-----AGTGTGAGTCTGTGTAATTG--CCAAGA-TTTTGCTCCTCTT-AAAGAAAAGAGATT---------------ATAAAATA-AA-ATAGAAAGAT---CAGTTCAGAA-----TTTTCAAAGTCTGCATCCC----------T----GT----------CA-T------TTGCAAATATAACTTC--------AT
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 11821
s GCF_007399415.2.NC_044325.1         1431432 222 - 155918640 ataccaccattgtgaaatacagtagaaagccaaga-t-aca----aaagccaagttatgctgttctggttgtgtgacatttgcaaacttaaacta-----------------attt-----catgtgagtctgtataattg--ccaaga-ttttactcctttt-gaaggaaa---------------------ataaaata-aa-atagaaagat---cacttcagaa-----ttttca--gtctgcatccctagcaggtaat----gg----------caTt------ttactaatatctcttc--------at
i GCF_007399415.2.NC_044325.1       I 389 I 212
s GCF_025201925.1.NC_066621.1         3079088 220 + 162938067 ATACCACCATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAGCCAAGTCATGCTGTTCTGGTTGTGTGACATTTGCAAActtcaacta-----------------attt-----catgtgagtctgtataattg--ccaaga-ttttactcctttt-gaaggaaa---------------------ataaaata-aa-atagaaagat---cacttcagaa-----ttttca--gtctgcatccctagcaggcaat----gg----------ta-t------ttgctaat-tctcttc--------at
i GCF_025201925.1.NC_066621.1       C 0 I 210
s GCA_045781085.1.CM099110.1          2260830 218 + 145055026 ATACCACCATTGTGAAATACAGTAGCT-GCCAAGA-T-ACA----AAAGCCAAGTCATGCTGTTCTGGTTGTGTGACATTTGCAAACTTAAACTA-----------------ATTT-----CATTGGAGTCTGTATAATTG--CCAAGA-TTTTactcctttt-aaataaaa---------------------ataaaata-aa-atgga----t---caCTTCAGAA-----TTTTCAAAGTCTGCATCCCTAGCAGGCAAT----GG----------CA-T------TTGCTAATATCTCTTC--------AT
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3502247 220 + 154637676 ATACCACCATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAGCCAAGTTATGCTGGTCCGGCTGTGTGACATTTGCAAACTTAAACTC-----------------ATGT-----CATGTGAGTCTGTTTAATTG--CCAAGATTTTTACTCCTTTT-AAAGAAAAGAGATT---------------ATAAAATA-AA-ATAGAAAGAT---CACTTCAGAA-----TTTTCAAAGTCTGCATCCC----------T----GG----------CA-T------TGGCAAATATAGCTTC--------AT
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1957503 220 - 158421364 aTACCACCATTGTGAAATACAGTAGAAAGCCAAGA-T-ACA----AAAGCCAAGTTATGCTGGTCCGGCTGTGTGACATTTGCAAACTTAAACTC-----------------ATTT-----CATGTGAGTCTTTATAATTG--CCAAGATTTTTACTCCTTTT-AAAGAAAAGAGATT---------------ATAAAATA-AA-ATAGAAAGAT---CACTTTAGAA-----TTTTCAAAGTCTGCATCCC----------T----GG----------CA-T------TTGCAAATATAGCTTC--------AT
i GCF_028017835.1.NC_088686.1       I 32 C 0
s GCA_030020295.1.CM057590.1        133056415 249 - 312449569 AGCCTTGT-------AATGCAATTAAAATTTTGCATA-ACC----AAAG-CAAACTATTCTACT-TTGTCGCATGACACTTGGAACTTTAAACTTCTCGTAATAAAGAATGCATGTATATCTATGCATGTATGTGTAAATGACCTCCAA-GTTCTCTAATTTTGAAAGGAAATAGATG---------------ACAAAGTT-AA-ATAAAAATACAAACACCTAAAGG-----TAAAACTAGTTTTTAGACCT--------------GGAAAGCACTCTCA-A------CTGCAAATGTAACTTC--------AT
i GCA_030020295.1.CM057590.1        C 0 I 3155
s GCA_033958435.1.CM066698.1          3487866 244 - 127301102 ACACCTCCATTGTGCAATACAGTAGAAAGCCAACA-T-ACA----AAAGGCAGGTTATACTGTTCTGGAGCTGTGACATTTGTAAACTTAAACTA-----------------ATTT-----TGTGTCAGTCTGAGTAACTG--CCAAGA-TGCTGCTCCTTTA-AAAAAACAGAAGTTTCAAAATAAAGTAAAataaacca-aa-atagaaagaa---CCCTTCAGCA-----TGTTTAAAGTTTGCATCTCTCGCAGTCCTT----AG----------CA-T------TTGCAAATATAGCTTC--------AT
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       133399473 249 - 307635815 AGCCTTGT-------AATGCAATTACAATTTTGCATA-ACC----AAAC-CAAACTATCCTACT-TTGTTGCATGACACTTGGAACTTTAAACTTCTCTTAATAAAGAATGCATGTATATCTATGCATGTATGTGTAAATGACCTCCAA-GTTCTGTAATTTTGAAAGGAAATAGATG---------------ACAAAGTC-AA-ATAAAAATACAGACACCTAAAGG-----TAAAACTCGTTTTCAGACCT--------------GGAAAGCACTCTCG-A------CTGCAAATGTAACTTC--------AT
i GCF_030867095.1.NC_081825.1       C 0 I 3116
s GCA_040894355.2.CM105055.1        111010146 263 + 311452600 ATACTACTATTAATAAATACAGTAGAAAGCCAAGA-A-ACA----AAAGTCAAGCTATGCTGTTCCTGGTGTGTGacatttgcaaccttaaatttCTCTTGACTAA------atgt-----tgtgtgagtctgtgttattg--ccaaaa-atttgctcctttt-aaagaaaggagattATGAAATGAAATAAAataaaata-aa-atcggAAGAT---Cactttagaa-----ttttaaaagtctGCATACCT----------AGAAGG----------CA-TTGGCCATTGCAAATATAGCTTCATTGTACTAT
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9082 220 +     31630 GGTATTATATGGCTAGGCATGAtttgaa---aggatgtagagaaactagaaaagatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctattgtgtccctccttaatctcctcttttccaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
s GCA_965152275.1.OZ223944.1          4553356 220 + 132879417 GGTATTATATGGCTAGGCATGAtttgaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctatcatgtccctccttaatctcctcttttccaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
i GCA_965152275.1.OZ223944.1        C 0 I 174
s GCA_965152235.1.OZ223887.1        120602482 220 - 134836623 GGTATTATATGGCTAGGCATGattagaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctatcatatccctccttaatctcctcttttccaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
i GCA_965152235.1.OZ223887.1        C 0 I 191
s GCF_009764565.3.NC_050073.1       128186560 219 - 131128815 GGTATTATATGGCTAGACATGAtttgaa---aggatgtagacaaactagaaaggatccagagaggagtgaaaaaggtgatcaaagggatggaatg----------aagccatgtgagcaaaggctgagggaactgggtatgtttagtttgaa---------------gacggctatcatgtccctccttaatctcctcttttccaaatacttgaaaggttgccataaaaaag--tttgagaaaag----ttgt
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130123317 220 - 133850159 GGTATTATATGGCTAGGCATGAtttgaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctatcttatccctccttaatctcctcttttccaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
i GCA_965140235.1.OZ222813.1        I 238 I 191
s GCA_965140285.1.OZ223564.1          3886211 220 + 135739771 GGTATTATATGGCTAGGCATGAtttgaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctatcatgtccctccttaatctcctctttttcaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
i GCA_965140285.1.OZ223564.1        C 0 I 174
s GCA_033349115.1.JAVFKW010000008.1    515963 220 -   2470581 Ggtattatatagctaggcatcatttgaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagggatggaaagt---------aagccatgtgagcaaagactgaaggaactgggtatgtttagtttggaAAAGAGGAGATTAAGgagggatatgatagccatc---------------ttcaactacttgaaacactgccataaaaaag--ttggaaaaaag----tttt
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2579007 220 + 131075015 GGTATTATATGGCTAGGCATGAtttgaa---aggatgtagagaaactagaaaggatccagagaggagtgacaaaggtgatcaaagtgatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttgaa---------------gatggctatcatgtccctccttaatctcctctttttcaaatacttgaaaggctgccataaaaaag--tttgagaaaag----ttgc
i GCA_965140295.1.OZ223117.1        C 0 I 174
s GCA_032164245.1.JAVMKO010000006.1  95612528 220 + 106994437 GGTATTATATGgctaggcatcatttgaa---aggatgtagagaaatgagaaaggatccagagaggagtgacaaaggtgatcaaagggatggaatga---------aaggcatgcgagaaaaggctggtggaactgcatatgtttagtttggaAAAGAGGAGATTAAGgaggggcatggtagccatc---------------ttcaaatacttgaaacgctgccataaaaaag--ttggataaaag----ttgt
i GCA_032164245.1.JAVMKO010000006.1 I 11821 C 0
s GCF_007399415.2.NC_044325.1       124972288 212 + 155918640 GGCATTCTACggctcggcatcatttgaa---aggatgtcgagaaactagaaaggatccagagaggagtga----------caaagggatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttggaAAAGAGGAGATTAAGgatggacatgataccaatc---------------ttgaaatacatgaaacattgctataaaaaag--ttggagaaaag-TC-tttt
i GCF_007399415.2.NC_044325.1       I 221 T 46212
s GCF_025201925.1.NC_066621.1       124862719 212 - 162938067 GGCATTCTACGGctcggcatcatttgaa---aggatgtcgagaaactagaaaggatccagaaaggagtga----------caaagggatggaatgc---------aagccatgtgagcaaaggctgaaggaactgggtatgtttagtttggaAAAGAGGAGATTAAGgacggacatgatagcaatc---------------ttgaaatacatgaaacattgctataaaaaag--ttggagaaaag-TT-tttt
i GCF_025201925.1.NC_066621.1       I 224 T 30390
s GCA_045781085.1.CM099110.1          2261048 212 + 145055026 GGCATTCTACAGCTCGGCATCatttgaa---aggatgtagagaaacgagaaaggatccagagaggagtga----------caaagtgatagaatgc---------aagccatgtgaacaaaggctgaaagaactgggtatgtttagtttggaAAAGAGGAGATTAAGgacggacataatagccatc---------------ttcaaatacttgaaacattgctgtaaaaaag--ttggagaaaag-TT-tttt
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3502467 211 + 154637676 GGTATTCTATGGCTAGGCATCATTTgaa---aggaagtagagaaactagaaaggatccggagaggggtgacaaaggtgatcaaagggatgga------------------atgagagcaaaggctgaaggaactgggtatgtttagtttggaAAAGAGGAGATTAAGgagggacatgatagccatc---------------ttcaactacttgaaacactgccataaaaaaa--ttggagaaaag----tttt
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1957723 211 - 158421364 GGTATTATATGGCTAGGCATCATttgaa---aggaagtagagaaactagaaaggatccggagaggagtgacaaaggtgatcaaagggatgga------------------atgcaagcaaaggctgaaggaactgggtatgtttagtttggaAAAGAGGAGATTAAGgagggacatgatagccatc---------------ttcaactacttgaaacactgccataaaaaaa--ttggagaaaag----tttt
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133059819  42 - 312449569 GCTATCACAGAGCCACCTATCCATTGAATTTTAAATGTAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_030020295.1.CM057590.1        I 3155 C 0
s GCA_033958435.1.CM066698.1          3488110 217 - 127301102 GGTATTAGATGGGTAGGCATCATT---a---agaatgtagcacaactaagaagggtccagaggtgaatatcaaagctgatcaaagggacgcaatga---------aagccatatgagcaaaggctgaaggaactgagtgtgtttcatttgaaCAAGTAAAGATTAAAggggggcatgatagcaata---------------ttcaaatacttgaaatgctgccgtaaaaaag--atggagaaaag----tcat
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       133402838  42 - 307635815 GCTATCACAGAGCTGCCTATCCATTGAATTTTAAATGTAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_030867095.1.NC_081825.1       I 3116 C 0
s GCA_040894355.2.CM105055.1        111010409 221 + 311452600 GGTACTATATGGCTACGCATCATttgaa---aggatgtagagacactggaaaggatccagagatgggtgacaaaaattatcaaagggatagaatgcAAGCCATATaagc---------aaaggctgaaggaactgg-tatgtttagtttggaAAAGAGGAGATTAGCtgggaacatgatggtggtc---------------ttcaaatacttgaaaggctgccataaaaaaaAGatgaagaaaag----ttgt
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9302 174 +     31630 tctgtcttgccacagggggcaggacaagaggcaatgg-gttcaaactacagcacagatgatttctattaaacctcaggaaaag-cttcctaagggtcagaacagtagggcaatggaacagatctgcca-aggaaggttgtggaatctccttcactggaggttttcgaaaggaggctg
s GCA_965152275.1.OZ223944.1        128215320 174 - 132879417 tctgtcttgccacagagggcaggacaagaggcaatgg-gttcaaactacagcacagatgatttagattaaacctcaggaaaag-cttcctaacggtcagaacagtagggcaatggaacagatctgcca-agggaggttgtggaacctccttcactggaggttttcgaaaggaggctg
i GCA_965152275.1.OZ223944.1        I 2498 n 174
s GCA_965152235.1.OZ223887.1          5528885 174 + 134836623 tctgtcttgccgcagagggcaggacaagaggcaatgg-gttcaaactacagcacagatgatttctattaaacctcaggaaaag-tttcctaactgtcagaacagtagggcaatggaacagatctgtca-agggaggttgtggaaactccttcactggaggtttttgaaagaaggctg
i GCA_965152235.1.OZ223887.1        n 191 n 191
s GCF_009764565.3.NC_050073.1       128186779 174 - 131128815 tctgtcttgccacagagggcaggacaagaggcaatgg-gttcaaactacagcacagatgatttagattaaacctcaggaaaag-cttcctaactgtcagaacagtagggcaatggaacagatctgcaa-agggatgttgtggaagctccttcgctggaggttttcagaaggaagctg
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522488 174 + 133850159 tctgtcttgccgcagagggcaggacaagaggcaatgg-gttcaaactacagcacagatgatttcaattaaacctcaggaaaag-cttcctaactgtcagaacagtagggcaatggaacagatctgtca-agggaggttgtggaaactccttcactggaggtttttgaaaggaggctg
i GCA_965140235.1.OZ222813.1        I 220 C 0
s GCA_965140285.1.OZ223564.1        131480984 174 - 135739771 tctgtcttgccacagagggtaggacaagaggcaatgg-gttcaaactacagcacagatgattttaattaaacctcaggaaaag-cttcctaacggtcagaacagtagggctatggaacagatctgcca-agggaggttttggaagctccttcactggaggttttcgaaaggaggctg
i GCA_965140285.1.OZ223564.1        I 458 I 17
s GCA_033349115.1.JAVFKW010000008.1    516183 174 -   2470581 tctctcttgccacagagggcaggagaagaggcaatgg-gttcaaactacagagtagcagatttagattaaatctcaggaaaag-tttcctcactgtcagaacagtagggcaatggaacagacctgcca-agggaggctgtggaagctcctttactggaggttttcaaaaggaggctg
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128272800 174 - 131075015 tctgtcttgccacagagggtaggacaagaggcaatgg-gttcaaactacagcacagatgattttaattaaacctcaggaaaag-cttcctaacggtcagaacagtagggctatggaacagatctgcca-agggaggttttggaagctccttcactggaggttttcgaaaggaggctg
i GCA_965140295.1.OZ223117.1        I 458 I 17
s GCA_032164245.1.JAVMKO010000006.1  95612748 174 + 106994437 tctctcttgccacggagggcaggaaaaaaggcaacag-attcaaactacagcgtatcagatttagattaaacctcaggaaaag-cttcctaaccctcagagcggtagggcaatggaacagacctgcca-agggaagttgaggaagctccttcactagtgattttcaaatggaggctg
i GCA_032164245.1.JAVMKO010000006.1 C 0 T 11821
s GCF_007399415.2.NC_044325.1         1431866 173 - 155918640 -ctctcttgccacagagggcaggacaagaggcagagg-gttcaaactccagcacagccgatttagattaaacctcaggaaaat-cttcctaagtgtcagagcagtaggacaatggaacaaatctgcca-agggaggttgttgaagctccttcactggaggttttcaaaaggaggctg
i GCF_007399415.2.NC_044325.1       I 212 I 76456
s GCF_025201925.1.NC_066621.1         3079518 173 + 162938067 -ttctcttgccacagagggcaggacaagaggcagagg-gttcaaactccagcacagccgatttagattaaacctcaggaatag-cttcctaagtgtcagagcagtaggacaatggaacaaacctgcca-agggaggttgtggaaactccttcactcgaggttttcaaaaggaggctg
i GCF_025201925.1.NC_066621.1       I 210 C 0
s GCA_045781085.1.CM099110.1          2261260 173 + 145055026 -ctctcttgccacacagggcaggacaagaggaaatgg-gttcaaactacagcacagccgatttagattaaacctcaggaaaag-cttcctaactgtcagaacagtaggacaatagaacaaaccttcca-aaggagattctggaagctcctccattggaggttttcaaaaggagactg
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3502678 174 + 154637676 tctctcttgccacagagggcaggacaagtagcagtgg-gttcaaactacagcacagccgatttagattaaaccccaggaaaag-cttcctaactgtcagaacacttggacaatggaacagacctgcca-agggaggttgtggaaggtccttcactggaggttttcaaaaggaggctg
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1957934 174 - 158421364 tctctcttgccacagagggcaggacaagtggcagtgg-gttcaaactacagcacagccgatttagattaaaccccaggaaaag-cttcctaactgtcagaacagttgggcaatggaacagacctgcca-agggaggttgtggaagctccttcactggaggttttcaaaaggaggctg
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3488327 176 - 127301102 tctttctcgccccagagagcaaaacaagaagcaatggAggtcaaagtacaacatagcacatttaatttaaatctcatgaaaaa-cttcctagctgtaagaatgacagaactatggaacagatctgcccCggggagattgtggaatctccttcactggagattttcagaagaaggttg
i GCA_033958435.1.CM066698.1        C 0 I 669
s GCA_040894355.2.CM105055.1        111010630 166 + 311452600 tctcttttgccactg-------gataagaggcgatgg-gttcaaactacaacatagcagatttagattaaatctcaggaaaaa-cttcctaactgtaagaacagtaggacaatagaactgac-tgcct-agggatgttggggaaacgccttcactagagtttttcaaaaggaggcag
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCF_030867095.1.NC_081825.1       133402880   0 - 307635815 C
e GCA_030020295.1.CM057590.1        133059861   0 - 312449569 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9476 2 +     31630 ga
s GCA_965152275.1.OZ223944.1          4553750 2 + 132879417 ga
i GCA_965152275.1.OZ223944.1        I 174 I 15
s GCA_965152235.1.OZ223887.1          3240059 2 + 134836623 ga
i GCA_965152235.1.OZ223887.1        n 191 n 191
s GCF_009764565.3.NC_050073.1       128186953 2 - 131128815 ga
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522662 2 + 133850159 ga
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3886605 2 + 135739771 ga
i GCA_965140285.1.OZ223564.1        I 174 C 0
s GCA_033349115.1.JAVFKW010000008.1    516357 2 -   2470581 ga
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2579401 2 + 131075015 ga
i GCA_965140295.1.OZ223117.1        I 174 C 0
s GCA_032164245.1.JAVMKO010000006.1  95601101 2 + 106994437 ga
i GCA_032164245.1.JAVMKO010000006.1 T 11821 C 0
s GCF_007399415.2.NC_044325.1       124926288 2 + 155918640 ga
i GCF_007399415.2.NC_044325.1       T 46212 I 46385
s GCF_025201925.1.NC_066621.1         3079691 2 + 162938067 ga
i GCF_025201925.1.NC_066621.1       C 0 I 10114
s GCA_045781085.1.CM099110.1          2261433 2 + 145055026 ga
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3502852 2 + 154637676 ga
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1958108 2 - 158421364 ga
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3489172 2 - 127301102 ga
i GCA_033958435.1.CM066698.1        I 669 C 0
s GCA_040894355.2.CM105055.1        111010796 2 + 311452600 ga
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCF_030867095.1.NC_081825.1       133402880 0 - 307635815 C
e GCA_030020295.1.CM057590.1        133059861 0 - 312449569 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9478 15 +     31630 tcgc--catcagtcttg
s GCA_965152275.1.OZ223944.1        127696414 15 - 132879417 tcgc--catcagtcttg
i GCA_965152275.1.OZ223944.1        n 15 I 1563
s GCA_965152235.1.OZ223887.1          5529061 15 + 134836623 tcgc--catcagtcttg
i GCA_965152235.1.OZ223887.1        n 191 n 191
s GCF_009764565.3.NC_050073.1       128186955 15 - 131128815 tcgc--catcagtcttg
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522664 15 + 133850159 tcgc--catcagtcttg
i GCA_965140235.1.OZ222813.1        C 0 I 123
s GCA_965140285.1.OZ223564.1          3886607 15 + 135739771 tcgc--catcagtcttg
i GCA_965140285.1.OZ223564.1        C 0 I 123
s GCA_033349115.1.JAVFKW010000008.1    516359 15 -   2470581 tcgc--cattggtcttg
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2579403 15 + 131075015 tcgc--catcagtcttg
i GCA_965140295.1.OZ223117.1        C 0 I 123
s GCA_032164245.1.JAVMKO010000006.1  95601103 15 + 106994437 tcgc--aatgggtcttg
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 1157
s GCF_007399415.2.NC_044325.1       124972675 15 + 155918640 tcac--tatcagtcttg
i GCF_007399415.2.NC_044325.1       I 46385 T 46068
s GCF_025201925.1.NC_066621.1         3089807 15 + 162938067 tcac--catcagtcttg
i GCF_025201925.1.NC_066621.1       I 10114 T 9798
s GCA_045781085.1.CM099110.1          2261435 13 + 145055026 --gc--catcagtcttg
i GCA_045781085.1.CM099110.1        C 0 I 318
s GCF_027887155.1.NC_071508.1         3502854 15 + 154637676 tagc--catcgatcttg
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1958110 15 - 158421364 tagc--catcggtcttg
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3489174 15 - 127301102 tagc--cttcggtcttg
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111010798 15 + 311452600 tagc--catctttcttg
i GCA_040894355.2.CM105055.1        C 0 C 0
e GCF_030867095.1.NC_081825.1       133402880  0 - 307635815 C
e GCA_030020295.1.CM057590.1        133059861  0 - 312449569 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9493 142 +     31630 ggttggtcagaaac---aacaattcctgcatcttggc-------tgggggttcgactagaacacggcccatgtggtcccttctaaccctatggttctatgattctctgaactctgcaacaaccgaatatagagcagaaaggtggatgaggtg
s GCA_965152275.1.OZ223944.1          4553767 142 + 132879417 ggttggtcagaaac---aacaattcctgcatcttggc-------tgggggttcgactagaacacggcccatgtggtcccttctaaccctatggttctatgattctctgaactctgcaacaACCGAATATAGAGCAGAAAGGTGGATGAGGTG
i GCA_965152275.1.OZ223944.1        I 15 n 1563
s GCA_965152235.1.OZ223887.1        120602893 139 - 134836623 ggttggtcaga------aacaattcctgcatcttggc-------tgggggttcagctagaacatgacccatgtggtcccttctaaccctatggttctatgattctctgaactCTGCAACAATCTAATATAGAGCAGAAAGGTGGATGAGGTG
i GCA_965152235.1.OZ223887.1        I 191 N 0
s GCF_009764565.3.NC_050073.1       128186970 142 - 131128815 ggttggtcagaaac---aataaatcctgcatcttggc-------tgagggttagactagaaaacgacccatgcggtcccttctaaccctatggttctttgattctCTGAACTCTGCAACAACCTAATATAGAGCAGAAAGGTGGATGAGGTG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130123728 139 - 133850159 ggttggtcaga------aacaattcctgcatcttggc-------tgggggttcagctagaacacgacccatgtggtcccttctaaccctatggttctatgattctctgaactCTGCAACAATCTAATATAGAGCAGAAAGGTGGATGAGGTG
i GCA_965140235.1.OZ222813.1        I 191 I 396
s GCA_965140285.1.OZ223564.1        131481175 139 - 135739771 ggttggtcaga------aacaattcctgcatcttggc-------tgggggttcagctagaacacgacccatgtggtcccttctaaccctatggttctatgattctctgaactCTGCAACAATCTAATATAGAGCAGAAACGTGGATGAGGTG
i GCA_965140285.1.OZ223564.1        I 17 I 259
s GCA_033349115.1.JAVFKW010000008.1    516374 142 -   2470581 ggtgggtcagacac---aacaaatcctgcatcctggc-------tgggggttagactagaacacgacccatgtggtcccttctaaccccatggttctatgattccCTGAACTCTGCAACAACCTGATAGAGAGCAGAAAAGTGGATGAGGTG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128272991 139 - 131075015 ggttggtcaga------aacaattcctgcatcttggc-------tgggggttcagctagaacacgacccatgtggtcccttctaaccctatggttctatgattctctgaactCTGCAACAATCTAATATAGAGCAGAAACGTGGATGAGGTG
i GCA_965140295.1.OZ223117.1        I 17 I 395
s GCA_032164245.1.JAVMKO010000006.1   1914085 134 - 106994437 ggtgggtcaaacac---aataggtcctgcatcagagc-------agggggctagactagaacatgacccatgtggttccttctaaccctatggttctatgatt--------tctgcaacaacctgatatagagcagaaaggtggatgaggtg
i GCA_032164245.1.JAVMKO010000006.1 I 1018 C 0
s GCF_007399415.2.NC_044325.1       124926622 142 + 155918640 ggttagtcagacac---aacaaacactgcatcttggc-------tgggggttagactaaaacacgacccctgtgatccgttctaaccctgtggttctctgattctctgaactctgcaacaatctgatataaagcagaaaggttgatgaggtc
i GCF_007399415.2.NC_044325.1       T 46068 C 0
s GCF_025201925.1.NC_066621.1         3080024 142 + 162938067 ggttagTCAGACAc---aacaaacactgcaccttggc-------tgggagttagactagaacacgacccctgtgatcccttctaaccctgtgggtctatgattctCTGAACTCTGCAACAACCTGATATAGAGCAGAAAGGCGGATGAGGTC
i GCF_025201925.1.NC_066621.1       T 9798 I 382
s GCA_045781085.1.CM099110.1          2261766 142 + 145055026 ggttagtcAGACAC---AACAAACACTGCATCTTGGC-------TGGGGGTTAGACTAGAACACGACCCAggcggtcccttctaaccctctggttctatgattctctgaactCTGCAACAACCTCATATAGAGCAGAAAGGTGGATGAGGTC
i GCA_045781085.1.CM099110.1        I 318 C 0
s GCF_027887155.1.NC_071508.1         3502869 142 + 154637676 ggtgggtcagacac---aacaaacactgcatcttggc-------tgggggttagactagaacatgacccatgtggtcccttctaaccctatggttctatgattctctgaactctgcaacaacctgatatagagcagAAAGGTGGATGAGGTG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1958125 142 - 158421364 ggtgggtcagacac---aacaaacactgcatcttggc-------tgggggttagactagaacatgacccatgtggtcccttctaaccctatggttctatgattctctgaactctgcaacaacctgATATAGAGCAGAAAGGTGGATGAGGTG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133059861  11 - 312449569 ---------------------------------------------------------------------------------------------------------------------------------------------TGTATGTGGTG
i GCA_030020295.1.CM057590.1        C 0 I 6616
s GCA_033958435.1.CM066698.1          3489189 136 - 127301102 agtgggttagacac---aactaatcat------tggc-------aggaggctctggtagaatacgccccgtgtcaatccttctaaccctatggttctatgattgtatgTTCTCTGCAACAATCTGATGCTCAGCAGAAAGATGGATAAGATA
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       133402880  11 - 307635815 ---------------------------------------------------------------------------------------------------------------------------------------------TGCGTGTGGTG
i GCF_030867095.1.NC_081825.1       C 0 I 6678
s GCA_040894355.2.CM105055.1        111010813 141 + 311452600 gatggtttagacac---aacatatcctgcatcttggc--------aggggttagactaatATATGACTCTTGTGGCCCCTTCTAACCATaaggttctatgattctatgactattaCAACAACTTGATATACAGCAGAATGATGGATGTGGTG
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9635 259 +     31630 tttGAAAACCAGCCTTATATTGCAGCTTTAGTATCCTTCCATA-----------ATTCAATCATCAG-TTAGGAACCAGTATATATTTAT---GACAAGGCAGCCAAAACCTCACATTTGGAATAAAGTCCCAGAGTAAATTCAACAAAGACAATTATTTTGGAGAAAACTAAGTTAATATTCACAAA-GG-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAACAGCAGAGTTCAAGAAAGGGAGGCTGTAGTTAAAGCATGGTTGAAAGAA
s GCA_965152275.1.OZ223944.1          5064825 259 + 132879417 TTTGAAAACCAGCCTTATATTGCAGCTTTAGTATCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGTATATATTTAT---GACAAGGCAGCCAAAACCTCACATTTGGAATAAAGTCCCAGAGTAAATTCAACAAAGACAGTTATTTTGGAGAAAACTAAGTTAATATTCACAAA-GG-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAACAGCAGAGTTCAGCAAAGGGAGGCTGTAGTTAAAGCATGGTTGAAAGAA
i GCA_965152275.1.OZ223944.1        n 1563 n 1563
s GCA_965152235.1.OZ223887.1        131408227 259 - 134836623 TTTGAAAACCAGCCTTATATTGCAGCTTTAGTATCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAgtatatatttat---gacaagtcAGCCAAAACCTCACATTTGGAATAAAGTCCCAGagtaaattcaacaaagacaattATTTTGGAGAAAACTAAGTTAATATTCACAAA-GG-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAAGAGCAGAGTTCAACAAAGGGAGTCTGTAGTTAAAGCATGGTTGAAAGAC
i GCA_965152235.1.OZ223887.1        N 0 N 0
s GCF_009764565.3.NC_050073.1       128187112 258 - 131128815 TTTGAAAACCAGCCTTATATTGCAGGACTAGCATCCTTCCATA-----------ATTAAACCATCAG-TTAGGAACCAGTATATATTTAT---GACAAGTCAGACAAAACCTCACATTTGGAATAAAGTCCCAGAGTAAATTCAACAAAGACAATTATTTTGGAGATAACTAAGTTAATATTCACAAA--G-GGGGTGTTCACATAACTAAAGGAGGCATGAATGAGCAGCAAAGTTCAACAAAGAGAGGCTGTACTTAAAGCATGGTTGAAAGAA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3522802 260 + 133850159 TTTGAAAACCAGCCTTATATTGCAGCTTTAGTATCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGtatatatttat---gacaagtcaGCCAAAACCTCACATTTGGAATAAAGTCCCAGagtaaattcaacaaagacaattATTTTGGAGATAACTAAGTTAATATTCACAAAGgg-ggggTGTTCACATAACTAAAGGAGGTATGAATGAACAGCAGAGTTCAACAAAGGGAGTCTGTAGTTAAAGCATGGTTGAAAGAC
i GCA_965140235.1.OZ222813.1        I 123 C 0
s GCA_965140285.1.OZ223564.1          3886745 259 + 135739771 TTTGAAAACCAGCCTTAGATTGCAGCTTTAGTTTCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGtatatatttat---gacaagtcaGCCAAAACCTCACATTTGGAATAAAGTCCCAGagtaaattcaacaaagacaattATTTTGGAGAAAACTAAGTTAATATTCACAAA-GG-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAACAGCAGAGTTCAACAAAGAGAGGCTGTAGTTAAAGCATGGTTGAAAGAC
i GCA_965140285.1.OZ223564.1        I 123 I 125
s GCA_033349115.1.JAVFKW010000008.1    516516 257 -   2470581 TTTGAAAACCAGCCTTATACTGCAGCTCTAGCACCCTTCCATA-----------TTTAAAACATCGG-TTAGGCACCAGTATATATTTGTAATGAGAAGCCAGCCAAAACCACACATTTGGAATAAAGTCCCAGGGTAAATTCAACACAGACAATTCTGTTGGAGATAATGAAGGTAATATTCACAAA--G-GGGGTGTGTACATAGCTAAAGGAGGTCTGAATGAACAGCAGAGTTAAACAAAGGGAGGCTGTAGTTAAACCATGGTTGAA----
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 4
s GCA_965140295.1.OZ223117.1          2579541 259 + 131075015 TTTGAAAACCAGCCTTATATTGCAGCTTTAGTTTCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGtatatatttat---gacaagtcaGCCAAAACCTCACATTTGGAATAAAGTCCCAGagtaaattcaacaaagacaattATTTTGGAGAAAACTAAGTTAATATTCACAAA-GG-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAACAGCAGAGTTCAACAAAGAGAGGCTGTAGTTAAAGCATGGTTGAAAGAC
i GCA_965140295.1.OZ223117.1        I 123 C 0
s GCA_032164245.1.JAVMKO010000006.1   1914219 261 - 106994437 tttgaaagccaGTCTTATGTTGCAGCTCTAGCACCCTTCCATA-----------ATTAAAACATCAG-TTAGGAACCAGTATACATTTATAATGAGTAGTTGGCCCAAACCTCACATGTGGAGTAAAGTCCCAGAGTAAATTGAACAAAGACAATTATTTTGGAGATAACTAAGTTAATATTCACAAA--T-GGGGTGTTCACATACCTAAAGGAGCTCTGAATGGGCAGCAGAGTTAAACAAAGGGAGGCTGTAGGTAAACcatggttgaaagaa
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 106
s GCF_007399415.2.NC_044325.1       124926764 257 + 155918640 tttgaaaaccagccttctattgcagctctagcacctttccata-----------attaaatcgtcag-ttaggaaccaggatctattcag---gacaagtcagccaaagcctcacatttggaataaagtccccgagtaaattccacaaagacaattcttttggagataactaagttaatattcacaaa----gaggtgtttacataactaaaggaggtatgaatgaacagcagaggtcaacaaagggaggCTGTAGTTAAACCATGGTTGAAAGAA
i GCF_007399415.2.NC_044325.1       C 0 I 46069
s GCF_025201925.1.NC_066621.1       124832541 257 - 162938067 TTTGAAAACCAGCCTTCTATTGCAGCTCTAGCACCTTTCCATA-----------AATAAATCATCAG-TTAGGAACCAGGATATATTCAT---GACAAGTCAGCCAAAACCTCACATTTGGAATAAAGTCCCCGAGTAAATTCCACAAAGACAATTCTTTTGGAGATAACTAAGTTAATATTCACAAA----GGGGTGTTTACATAACTAAAGGAGGTATGAATGAACAGCAGAGGTCAACAAAGGGAGGCTGTAGTTAAACCATGGTTGAAAGAA
i GCF_025201925.1.NC_066621.1       T 30390 I 30723
s GCA_045781085.1.CM099110.1          2261908 258 + 145055026 TTTGAAAACCAGCCTTATATTGCAGCCCTTGCACCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGGATATATTCAT---GACAAGTCAGCCAAAACCTCACATTTGGAATAAAGTCCCAGAGTAAATtccacaaaaacaatttttttggagATAACTAAGGTAATATTCACAGA--G-GGGGTGTTTACATAACTAAAGGGGGTATGAATGAACAGCAGAGGTCAACAAAGGGAGGCCGTAGTTAAATCATGGTTGAAAGAA
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3503011 258 + 154637676 TTTGAAAACCAGCCTTATATTACAGCACTAGCACCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGGATATATTTAT---GACAAGTCAGCCAAAACCTCACTTTTGGAATAAAGTCCCAGAGTAAATTCAACAAAGACAATTCTTTTGGAGATCACTAAGTTAATATTCACAAA--G-GGGGTGTTCACAGAACTAAAGGAGGTACGAATGAACTGCAGAGTTCAACAAAGGGAGGCTGTAGTTAAACCATGGTTGAAAGAA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1958267 258 - 158421364 TTTGAAAACCAGCCTTATATTGCAGCACTAGCACCCTTCCATA-----------ATTAAATCATCAG-TTAGGAACCAGGATATATTTAT---GACAAGTCAGCCAAAACCTCACTTTTGGAATAAAGTCCCAGAGTAAATTCAACAAAGACAATTCTTTTGGAGATAACTAAGTTAATATTCACAAA--G-GGGGTGTTCACATAACTAAAGGAGGTATGAATGAACTGCAGAGTTCAACAAAGGGAGGCTGTAGTTAAACCATGGTTGAAAGAA
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        133066488   8 - 312449569 TTTTCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_030020295.1.CM057590.1        I 6616 N 0
s GCA_033958435.1.CM066698.1          3489325 237 - 127301102 TTTGGAAATCAGCCTTATATTGG--------CACCCTTCCAT------------------GCAT-----TAGGCACCAATATAAATTTATAATGATTAGTCAGCTAAAATCTCACATTGGGCATAAAGCCTGATAGTAAATCCAATAAACA-AACTGTTTTTGAGATAAATGAGGTCATACTCATAAG--G-GGAAGGATGATATAACCAAAGGAGATATGAAGGAGCAGCAGA-TTAAACAAAAAGAGACTGTATTTACACCATGTTTGAAA---
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       133409569   8 - 307635815 TTTTCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_030867095.1.NC_081825.1       I 6678 N 0
s GCA_040894355.2.CM105055.1        111010954   8 + 311452600 TTTGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_040894355.2.CM105055.1        C 0 I 1293

a score=0.000000
s GCF_015237465.2.NW_025111247.1         9894 115 +     31630 GCTCTCACACCCATTCTGGCCCCTGGCACTAG-ATGGAACTGGTATAAGTCAGCGGGG---------CAACATGAGTGGGTTTGGTAAAGATCACCATTCAAGAGAAAAACAATCTACTGAACAC
s GCA_965152275.1.OZ223944.1          4554168 115 + 132879417 GCTCTCACACCCATTCTGGCCCCTGGCACTAG-ATGGAACTGGTATAAGTCAGCGGGG---------CAACACGAGTGGGTTTGGTAAAGATCACCATTCAAGAGAAAAACAACCTACTGAACAG
i GCA_965152275.1.OZ223944.1        n 1563 C 0
s GCA_965152235.1.OZ223887.1        120603292 125 - 134836623 GCTCTCACACCCATTCTGGCCCCTGGCACTAGCATGGAACTGGTCTAAGTCAGCGGGAAATCAGAAGCAACACGAGTGGATTTGGTAAAGATCACCATTCAAGAGAAAAACAATCTTCTGAACAG
i GCA_965152235.1.OZ223887.1        N 0 I 1078
s GCF_009764565.3.NC_050073.1       128187370 125 - 131128815 GCTCTCACACCCATTCTGGCCCCTGGCACTAGCATGGAACTGGCATAAGTTGGCGGGGAATCAGAAGCAGCACAAGTGGGTTTGGTAAAGATCACCATTCAAGAGAAAAACAATATACTGAACAG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3523062 125 + 133850159 GCTCTCACACCCATTCTGGCCCCTGGCACGAGCATGGAACTGGTATAACTCAGCAGGGAATCAGAAGCAACACGAGTGGGTTTGGTAAAGATCACTATTCAAGAGAAAAACAATCTACTGAACAG
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131481573 125 - 135739771 GCTCTCACACCCATTCTGGCCCCTGGCACTAGCATGGAACTGGTCTAAGTCAGCGGGAAATCAGAAGCAACACGAGTGGGTTTGGTAAAGATCACCATTCAAGAGAAAAACAATCTTCTGAACAG
i GCA_965140285.1.OZ223564.1        I 259 I 11
s GCA_033349115.1.JAVFKW010000008.1    516777 125 -   2470581 GCTCTCACACCCGTTCTGGCCCCTGGCACTAGCATGGAACTGGCATAACTCAATGGGGAAACAGAAGCAACACAAGTGGGTTTGGAAAATATCACCATTGAAGAGAAAAACAGTCTACTGAATAG
i GCA_033349115.1.JAVFKW010000008.1 I 4 C 0
s GCA_965140295.1.OZ223117.1          2579800 125 + 131075015 GCTCTCACACCCATTCTGGCCCCTGGCACGAGCATGGAACTGGTATAACTCAGCAGGGAATCAGAAGCAACACGAGTGGGTTTGGTAAAGATCACTATTCAAGAGAAAAACAATCTACTGAACAG
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1   1914586 124 - 106994437 gcTCTCACACCCGTTCTGGTCCCTGGAACTTGCCTGGAACTGGCCTAACTCAGTGGGGAATCGGAAGCAACACAAGTGGGTTTGGAAAAGATCACCATTCAagagaaaaatagtctt-tgagcag
i GCA_032164245.1.JAVMKO010000006.1 I 106 I 706
s GCF_007399415.2.NC_044325.1       124973090 125 + 155918640 gctctcacacttgttctggCCCCTGGCAGTGGCATGGAACTGCCATAACTCAGCGGGGAATCAGATGCAACACAAGTGGGtttggaaaagatcaccattcaggagagaaacagtctactgaacaa
i GCF_007399415.2.NC_044325.1       I 46069 C 0
s GCF_025201925.1.NC_066621.1       124863521 125 - 162938067 GCTCTGACACTTGTTCTGGCCCCTGGCAGTGGCATGGAACTGGCATAACTCAGCGGGGAATCAGAAGCAACACAAGTGGGTTTGGAAAAGATCACCATTCAGGAGAGAAACAGTCTACTGAACAA
i GCF_025201925.1.NC_066621.1       I 30723 I 1170
s GCA_045781085.1.CM099110.1          2262166 125 + 145055026 GCTCTCACACTTGTTCTGGCCACTGCCACTGGCATGGAACTGGCATAACTCAACGGGGAATCAGAAGCAACACAAGTGGGTTTGGAAAAGATCACCACTCAGGAGAGAAACATCCTACTGAATAC
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3503269 125 + 154637676 GCCCTCACACCCGTTCTGGCCCCTGGCACTAGCATGGAACTGGCATAACTCAGCGAGGAATCAGAAGCAACACAAGTGGGTTTGGCAAAGATCACCATTCAAGAGAAAAACAGACTACTGAACAG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1958525 125 - 158421364 GCCCTCACACCCGTTCTGGCCCCTGGCACTAGCATGGAACTGGCATAACTCAGCAAGGAATCAGAAGCAACGCAAGTGGGTTTGGAAAAGATCACCATTCAAGAGAAAAACGGTCTACTGAACAG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3489562  95 - 127301102 -CCCTCTCACTGGTTTTGGCTCCTGTAACTAGGATGAAGCTGTTGTA-------------TCAGAAGCAACA--AG--------------ATCATCACTCAGGACAGAGTCAGTGTACTGAGCAG
i GCA_033958435.1.CM066698.1        C 0 C 0
e GCA_040894355.2.CM105055.1        111010962 1293 + 311452600 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10009 11 +     31630 TGATACAAATA
s GCA_965152275.1.OZ223944.1          4554283 11 + 132879417 TGATACAAATA
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3240583 11 + 134836623 TGATACAAATa
i GCA_965152235.1.OZ223887.1        n 1078 n 1078
s GCF_009764565.3.NC_050073.1       128187495 11 - 131128815 TGACACAAATA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3523187 11 + 133850159 TGATACAaata
i GCA_965140235.1.OZ222813.1        C 0 I 1
s GCA_965140285.1.OZ223564.1          3887129 11 + 135739771 TGATACAAATA
i GCA_965140285.1.OZ223564.1        I 125 I 1
s GCA_033349115.1.JAVFKW010000008.1    516902 10 -   2470581 TGATACGAAT-
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 961
s GCA_965140295.1.OZ223117.1          2579925 11 + 131075015 TGATACAAATA
i GCA_965140295.1.OZ223117.1        C 0 I 1
s GCA_032164245.1.JAVMKO010000006.1  95602275 11 + 106994437 tggtataaatc
i GCA_032164245.1.JAVMKO010000006.1 I 1157 C 0
s GCF_007399415.2.NC_044325.1       124973215 11 + 155918640 tgatacaaata
i GCF_007399415.2.NC_044325.1       C 0 I 16
s GCF_025201925.1.NC_066621.1         3080548 11 + 162938067 TGATACAAATA
i GCF_025201925.1.NC_066621.1       I 382 I 9807
s GCA_045781085.1.CM099110.1          2262291 11 + 145055026 GGATACCAACC
i GCA_045781085.1.CM099110.1        C 0 I 1027
s GCF_027887155.1.NC_071508.1         3503394 11 + 154637676 TGATACGACTA
i GCF_027887155.1.NC_071508.1       C 0 I 8
s GCF_028017835.1.NC_088686.1         1958650 11 - 158421364 TGATACGAAAA
i GCF_028017835.1.NC_088686.1       C 0 I 8
s GCA_033958435.1.CM066698.1          3489657 11 - 127301102 TGATGTGAAGA
i GCA_033958435.1.CM066698.1        C 0 I 8
e GCA_040894355.2.CM105055.1        111010962 1293 + 311452600 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10020 3 +     31630 C---CT
s GCA_965152275.1.OZ223944.1          4554294 6 + 132879417 CGCTCC
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          5529489 5 + 134836623 cGC-ct
i GCA_965152235.1.OZ223887.1        n 1078 n 1078
s GCF_009764565.3.NC_050073.1       128187506 1 - 131128815 C-----
i GCF_009764565.3.NC_050073.1       C 0 I 987
s GCA_965140235.1.OZ222813.1        130124263 3 - 133850159 c---cc
i GCA_965140235.1.OZ222813.1        I 396 I 1609
s GCA_965140285.1.OZ223564.1        131481709 3 - 135739771 c---cc
i GCA_965140285.1.OZ223564.1        I 11 I 1625
s GCA_965140295.1.OZ223117.1        128273525 3 - 131075015 c---cc
i GCA_965140295.1.OZ223117.1        I 395 I 1434
s GCA_032164245.1.JAVMKO010000006.1  95602286 1 + 106994437 a-----
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 99
s GCF_007399415.2.NC_044325.1       124973242 1 + 155918640 c-----
i GCF_007399415.2.NC_044325.1       I 16 T 45090
s GCF_025201925.1.NC_066621.1         3090366 1 + 162938067 c-----
i GCF_025201925.1.NC_066621.1       I 9807 T 8803
s GCF_027887155.1.NC_071508.1         3503413 1 + 154637676 C-----
i GCF_027887155.1.NC_071508.1       I 8 I 895
s GCF_028017835.1.NC_088686.1         1958669 1 - 158421364 C-----
i GCF_028017835.1.NC_088686.1       I 8 I 951
s GCA_033958435.1.CM066698.1          3489676 1 - 127301102 C-----
i GCA_033958435.1.CM066698.1        I 8 I 927
e GCA_040894355.2.CM105055.1        111010962 1293 + 311452600 I
e GCA_045781085.1.CM099110.1          2262302 1027 + 145055026 I
e GCA_033349115.1.JAVFKW010000008.1    516912 961 -   2470581 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10023 1 +     31630 G
s GCA_965152275.1.OZ223944.1          5065226 1 + 132879417 G
i GCA_965152275.1.OZ223944.1        n 0 I 952
s GCA_965152235.1.OZ223887.1          3240595 1 + 134836623 g
i GCA_965152235.1.OZ223887.1        n 1078 n 1078
s GCA_965140235.1.OZ222813.1          3523199 1 + 133850159 g
i GCA_965140235.1.OZ222813.1        I 1 I 949
s GCA_965140285.1.OZ223564.1          3887141 1 + 135739771 G
i GCA_965140285.1.OZ223564.1        I 1 I 950
s GCA_965140295.1.OZ223117.1          2579937 1 + 131075015 G
i GCA_965140295.1.OZ223117.1        I 1 I 945
e GCA_040894355.2.CM105055.1        111010962 1293 + 311452600 I
e GCA_033958435.1.CM066698.1          3489677 927 - 127301102 I
e GCF_028017835.1.NC_088686.1         1958670 951 - 158421364 I
e GCF_027887155.1.NC_071508.1         3503414 895 + 154637676 I
e GCA_032164245.1.JAVMKO010000006.1  95602287 99 + 106994437 I
e GCA_045781085.1.CM099110.1          2262302 1027 + 145055026 I
e GCF_025201925.1.NC_066621.1         3090367 8803 + 162938067 T
e GCF_007399415.2.NC_044325.1       124973243 45090 + 155918640 T
e GCA_033349115.1.JAVFKW010000008.1    516912 961 -   2470581 I
e GCF_009764565.3.NC_050073.1       128187507 987 - 131128815 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10024 86 +     31630 TTCAGTAGAT-----TGTTTAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAATGAGGGATCATCAAGACAACATTTT-GGTGGTAAA-AG
s GCA_965152275.1.OZ223944.1          5066179 84 + 132879417 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAATGAGGGATCATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_965152275.1.OZ223944.1        I 952 I 398
s GCA_965152235.1.OZ223887.1          5530444 84 + 134836623 TTCAGGGTAT-----T--TGAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAATGAGAGATCATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_965152235.1.OZ223887.1        n 1078 n 1078
s GCF_009764565.3.NC_050073.1       128188494 83 - 131128815 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCATTTTAC--------------------TGCAAATTT--TACAATGAGAGATCATCAAGACAACATT-T-GGTGGTAAA-AG
i GCF_009764565.3.NC_050073.1       I 987 C 0
s GCA_965140235.1.OZ222813.1          3524149 84 + 133850159 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAATGAGAGATCATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_965140235.1.OZ222813.1        I 949 C 0
s GCA_965140285.1.OZ223564.1          3888092 84 + 135739771 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAGTGAGAGATCATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_965140285.1.OZ223564.1        I 950 C 0
s GCA_033349115.1.JAVFKW010000008.1    517873 84 -   2470581 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCGGTTTAC--------------------TGCAAATTG--TACAATGAGAGATAATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_033349115.1.JAVFKW010000008.1 I 961 C 0
s GCA_965140295.1.OZ223117.1          2580883 84 + 131075015 TTCAGGGTAT-----T--TTAGGC-TTT-T--TATCCCATTTTAT--------------------TGCAAATTG--TACAGTGAGAGATCATCAAGACAACATTTT-GGTGGTAAA-AG
i GCA_965140295.1.OZ223117.1        I 945 C 0
s GCA_032164245.1.JAVMKO010000006.1  95602386 83 + 106994437 TTCAGGGCAT-----T--TTAGGC-TTT-T--CATCCCATTTTAC--------------------TGAAAATTG--TACCATGAGAGATAATCAAGACAACATTCT-GGTGGTAAA-A-
i GCA_032164245.1.JAVMKO010000006.1 I 99 C 0
s GCF_007399415.2.NC_044325.1       124928153 84 + 155918640 ttcatggtat-----t--ttatgc-ttt-t--tgtcccattttac--------------------tgcaaatta--tagagtgagagataatcaagacaacatttt-ggtggtaaa-ag
i GCF_007399415.2.NC_044325.1       T 45090 I 46143
s GCF_025201925.1.NC_066621.1         3081564 84 + 162938067 TTCAGGGTAT-----T--TTAGGC-TTT-T--TGTCCCATTTTAC--------------------TGCAAATTA--TACAGTTAGAGATCATAAAGATAACATTTT-GGTGGTAAA-AG
i GCF_025201925.1.NC_066621.1       T 8803 C 0
s GCA_045781085.1.CM099110.1          2263329 84 + 145055026 TTCAGGGTAT-----T--TTAGGT-TTT-T--TGTTCCATTTTAC--------------------TGCAAATTA--TACAGTGAGAGACAATCAAGAGAACATCTG-GGTGGTAAA-AG
i GCA_045781085.1.CM099110.1        I 1027 C 0
s GCF_027887155.1.NC_071508.1         3504309 84 + 154637676 TTCAGGGTAG-----T--TTAGTC-TTT-T--TATCCTATTTTAC--------------------TGCACATTA--TACAATGAGAGATAATCAAGACAACATTTT-GGTGGTAAA-AG
i GCF_027887155.1.NC_071508.1       I 895 C 0
s GCF_028017835.1.NC_088686.1         1959621 84 - 158421364 TTCAGGGTAG-----T--TTAGGA-TTT-T--TATCCCATTTTAC--------------------TGCACATTA--TACAATGAGAGAGAATCAAGACAACATTTT-GGTGGTAAA-AG
i GCF_028017835.1.NC_088686.1       I 951 C 0
s GCA_030020295.1.CM057590.1        179592098 88 + 312449569 CTAAGGATATAT---T--TTTTTC-ATT-TGCTTTCCCATTTATC--------------------AGCAAGTTA--TTCAGTGAGAGAAAACAAAGATGACATTTT-GCTATCAAA-AG
i GCA_030020295.1.CM057590.1        N 0 C 0
s GCA_033958435.1.CM066698.1          3490604 74 - 127301102 TTCAGGGTAT-----T--TAAG---------------TATTTTAG--------------------TGTAAATTC--TACAGGGAGAGATAATGAAGACAACATTTT-GAAGACAACAAG
i GCA_033958435.1.CM066698.1        I 927 C 0
s GCF_030867095.1.NC_081825.1       174512601 91 + 307635815 CTAAGGATATATATTT--TTTTTC-ATC-TGCTTTCCCATTTATC--------------------AACAAGTTA--TTCAGTGAGAGAAAACAAAGATGACATTTT-GCTATCAAA-AG
i GCF_030867095.1.NC_081825.1       N 0 C 0
s GCA_040894355.2.CM105055.1        111012255 84 + 311452600 ttcaaggtat-----t--ttaggc-ttt-t--tatcccattttac--------------------tgcaAATTA--TACAGTGAGAGATGATCAAGACACCATTTT-GGTGGTAAT-AG
i GCA_040894355.2.CM105055.1        I 1293 C 0
s GCA_045364815.1.CM098526.1        180810979 81 + 406759874 TTCAGGATAT-----T--TTAGGC-AA--T--TGTCCCATATCAC--------------------TGCAAAT----TCCTCTGACTGAAAATCAAGACAATGTTTT-ATTGtcaaa-aa
i GCA_045364815.1.CM098526.1        N 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10110 24 +     31630 TGT--CTCCAT--TTTGAGAAC-A-GAA---AA
s GCA_965152275.1.OZ223944.1        127697992 24 - 132879417 TGT--CTCCAT--TTTGAGAAC-A-GAA---AA
i GCA_965152275.1.OZ223944.1        I 1563 n 398
s GCA_965152235.1.OZ223887.1          3241631 24 + 134836623 TGT--CTCCAT--TTTgagaac-a-gaa---aa
i GCA_965152235.1.OZ223887.1        n 1078 I 434
s GCF_009764565.3.NC_050073.1       128188577 24 - 131128815 AGT--CTCCAT--TTTGAGAAC-A-GAA---AA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524233 24 + 133850159 TGT--CTCCAT--TTTGagaac-a-gaa---aa
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888176 24 + 135739771 TGT--CTCCAT--TTTGagaac-a-gaa---aa
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    517957 24 -   2470581 AGT--CACCAT--TTAGAGAAT-A-GG-A--AA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2580967 24 + 131075015 TGT--CTCCAT--TTTGagaac-a-gaa---aa
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95602469 26 + 106994437 -GT--CACCAT--TTTGAGAAT-A-GGAGGAAA
i GCA_032164245.1.JAVMKO010000006.1 C 0 C 0
s GCF_007399415.2.NC_044325.1         1508495 24 - 155918640 act--ctccat--tttgagaat-a-g--GG-aa
i GCF_007399415.2.NC_044325.1       I 76456 T 67109
s GCF_025201925.1.NC_066621.1         3081648 25 + 162938067 ACT--CACCAT--TTTGAGAAT-A-G--GAAAA
i GCF_025201925.1.NC_066621.1       C 0 I 123
s GCA_045781085.1.CM099110.1          2263413 25 + 145055026 AGT--CACCAT--TTTGAGact-a-a--GGGgt
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504393 24 + 154637676 AAT--CACCAT--TTTCAGAA-----GAGAAAA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1959705 24 - 158421364 AGT--CACCAT--TTTCAGAA-----CAGAAAA
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592186 19 + 312449569 ATT--AAACAT--TAGGAAACT-A---------
i GCA_030020295.1.CM057590.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3490678 27 - 127301102 AGT--CATTGT--TTTGACAAT-A-GAATTAAA
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174512692 19 + 307635815 ATT--AAACAT--TAGTGAACT-A---------
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111012339 21 + 311452600 AGT--GAACAT--tttgagaac-a-g------a
i GCA_040894355.2.CM105055.1        C 0 C 0
s GCA_045364815.1.CM098526.1        180811060 20 + 406759874 -----caaaatTGttttagAAC-A-C------A
i GCA_045364815.1.CM098526.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10134 127 +     31630 AA-C--AAC----A-ACG-C--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTCT-TTACCAGGTA----------GTTGAA--GAAAAGAAAACAT----TTCTTTT-------ACTCACGTTAGTCTTTG-TCCTG-TAATATTAAAGTG---------GCCTGCTGCAA
s GCA_965152275.1.OZ223944.1        128217109 127 - 132879417 AA-C--AAC----A-ACG-C--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTCT-TTACCAGGTA----------GTTGAA--GAAAAGAAAACAT----TTCTTTT-------ACTCACGTTAGTCTTTG-TCCTG-TAATATTAAAGTG---------GCCTGTTGCAA
i GCA_965152275.1.OZ223944.1        n 398 C 0
s GCA_965152235.1.OZ223887.1        120604495 127 - 134836623 aa-c--aac----a-atg-c--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTAT-TTACCAGGTA----------ggtgaa--gaaaagaaaacat----ttctttt-------aCTCACGTTAGTCTTTG-TCCTG-TAATATTAAAGCT---------GCCTGTTGCAA
i GCA_965152235.1.OZ223887.1        I 1078 C 0
s GCF_009764565.3.NC_050073.1       128188601 127 - 131128815 AA-C--AAC----A-ACC-C--TGT-TTCTCAGTAAAAAGAATGGATCTGGGTGTAT-TTACCAGGTA----------GTTGAA--GAAACAAAAACAT----TTCTTTT-------ACTCACGTTAGTCTTTG-TCCTG-TAATGTTAAAGCT---------GCCTGTTGCAA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524257 127 + 133850159 aa-c--aac----a-acg-c--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTCT-TTACCAGGTA----------gctgaa--gaaaagaaaacat----ttatttt-------actcAAgttagtctttg-tccgg-taatattaaagcg---------gcctgttgcaa
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888200 127 + 135739771 aa-c--aac----a-acg-c--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTCT-TTACCAGGTA----------gctgaa--gaaaagaaaacat----ttctttt-------aCTCAAGTTAGTCTTTG-TCCGG-TAATATTAAAGCG---------GCCTGTTGCAA
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    517981 126 -   2470581 AA-A--AA-----A-ACC-C--TGT-TTCTCAGAGAAAATAATGGATCTGGGTGTAT-TTACCAGGTA----------GCTGAA--GAAAAGAAAACAT----TTATTTT-------ACTCACGTTAGTCTTTG-TCCTG-TAATATTAAAGCT---------GCCTGTTGCAA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2580991 127 + 131075015 aa-c--aac----a-acg-c--TGT-TTCTCAGTAAAAAGAATTGATCTGGGTGTCT-TTACCAGGTA----------gctgaa--gaaaagaaaacat----ttctttt-------aCTCAAGTTAGTCTTTG-TCCGG-TAATATTAAAGCG---------GCCTGTTGCAA
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95602495 127 + 106994437 AA-A--ACC----A-AAC-C--TGT-TTCTCAGTGAATAGAATGGATCTGGGTGTAT-TTACCAAGTA----------GTTGAA--GAAAAGAAGACAT----TTCTTTT-------ACTCACGTTAGTCTTTG-TCCTG-TAATATTAAAGCT---------GCCTGTTGCAA
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 11663
s GCF_007399415.2.NC_044325.1       124974380 129 + 155918640 GG-G--GGGGGGAA-A---c--tgt-ttctcattgaaaagaatggatctgggtgtat-ttaccaggta----------ggtgaa--gagaagaaaacat----ttatttt-------actcacattagtctttg-tcctg-taatattaaagct---------gcctgttgcaa
i GCF_007399415.2.NC_044325.1       I 46143 C 0
s GCF_025201925.1.NC_066621.1       124864816 125 - 162938067 GG-G--GGG----A-A---c--tgt-ttctcattgaaaagaatggatctgggtgtat-ttaccaggta----------gctgaa--gaAAAGAAAACAT----TTATTTT-------ACTCACATTAGTCTTTG-TCCTG-TAATATTAAAGCT---------GCCTGTTGCAA
i GCF_025201925.1.NC_066621.1       I 1170 I 455
s GCA_045781085.1.CM099110.1          2263438 125 + 145055026 gg-g--gga----a-a---t--cat-tTCTCATTGAAAAGAATGGATCTGGGTGTAT-TTACCAGGTA----------GTTGAA--Gagaagaaaacat----ttatttt-------actcACTTTAGTCTTCG-TCCTA-TAATATTAAAGCT---------GCCTGTTGCAA
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504417 127 + 154637676 AA-C--AAC----C-ACC-C--TGT-TTCTCAGTGAAAAGAATGGATCTGGGTGTAT-TTACTAGGTA----------GCTGAA--GAAAAGAAAACAT----TTTGTTT-------ACTCACATTAGTCTTTG-TCCTG-TAATATTAAAGCT---------GCCTGTTGCAA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1959729 127 - 158421364 AA-C--AAC----C-ACC-C--TGT-TTCTCAGTGAAAAGAATGGATTTGGGTGTAT-TTACCAGGTA----------ACTGAA--GAAAAGAAAACAT----TTTGTTT-------ACTCACATTAGTCTTTG-TCCTG-TAATATGAAAGCT---------GCCTGTTGCAA
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592205 118 + 312449569 -------------A-GAT-T--TGT-TTCCTAGTAGAAGGGTTTTATGTTAGGGATT-TCTGTAGGTATTAAAGATAGTTA----------ATAAGC--------TTTTA-------ACTTACCTTAACCTGTA-CTCCA-TAATTTTAAAAT----------GTCCGTTGGAA
i GCA_030020295.1.CM057590.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3490705 125 - 127301102 A-----AAC----A-GCC-C--TAT-TTCTCAGTACAAAGATTAGATCTGGGTCTAT-TTCCCAGGCA----------TTGGAA--GAAATGAAAACCT----TTGTTTT-------ACTCACATTATTCTTTC-TCCTG-AAATATTAAAGCT---------GTCTGTTGCCA
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174512711 109 + 307635815 -------------A-GAT-T--TTTGTTCCTAGTAGAAGGGTTTTATGTCAGAGATT-TCTGTAGGCA----------TTA----------ATAAGC--------TTTTA-------ACATACCTTAACTTGTG-CTCCA-TAATTTTAAAAT----------GTCCGTTGAAA
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111012360 125 + 311452600 a-----aaa----a-aat-c--ttt-ttctcagTAGCAAGAATGGATCTGGTAGTAT-TTCCCGGGTA----------GTCGAA--GAAAATAAAGCAT----TTCTTTT-------ACTCCCCTTAGTCTTTG-TCCCG-TAATGTTAAAGTT---------ACCTGTTGCAA
i GCA_040894355.2.CM105055.1        C 0 C 0
s GCA_045364815.1.CM098526.1        180811080 125 + 406759874 C-----AAT----GCAGT-CTTttt-ttCTCAACAGTCAGAATGGGTTTGGGAGATT-TCTGTAGGTA----------TTAGAACTAAAAGGAAACTAT----CAC-----------ATTCACCTTTTTATTT--CTCCA-TGATGTTAAAGCT---------GTCTgttgcaa
i GCA_045364815.1.CM098526.1        C 0 I 147

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10261 247 +     31630 GGGAGACCTCTC--------TCTTTCCTGGATTCAA-----------ACGGTGTAATTCGCGGC-AGGGCGTA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTCAGAGCC-G---T---TA--AT--CTCAG-GTCTGGCACTA------------------AA------------G-G---CGTCATTAAAATA-CCCTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------c-aatctgttggcttctaa--ctt-tgttcaagttctttgaagtgttgatgct------gctctccatccc-tttcccctgttt
s GCA_965152275.1.OZ223944.1        128217236 247 - 132879417 GGGAGACCTCTC--------TCTTTCCTGGATTCAA-----------ACGGTGTAATTAGCGGC-AGGGCGTA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTCAGAGCC-G---T---TA--AT--CTCAG-GTCTGGCACTA------------------AA------------G-G---CATCATTAAAATG-CCCTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGc-----------------c-aatctgttggcttctaa--ctt-tgttcaagttctttgaagtgttgatgct------gctctccatccc-tttcccctgttt
i GCA_965152275.1.OZ223944.1        C 0 I 720
s GCA_965152235.1.OZ223887.1        120604622 247 - 134836623 GGGAGACCTCTC--------TCTTTCCTGGATTCAA-----------AAGGTGTAATTAGCGGC-AGGGCGTA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTCAGAGCT-G---T---TA--AT--CTCAG-GTCTGGCACAA------------------AA------------G-G---CATCATTAAAATG-CCTTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------C-AATCTGTTGGCTTCTAA--CTT-TGTTCAAGTTCTTTGAAGTTTTGATGCT------GCTCTCCATCCC-TTTCCCCTGTTT
i GCA_965152235.1.OZ223887.1        C 0 n 0
s GCF_009764565.3.NC_050073.1       128188728 249 - 131128815 GAGAGACATCTC--------TCTTTCTTGGATTCAA-----------AAGGTGTAATTAGTGGC-AGGACGTA----TTTATTTGGTCTGGTGCCATTTGGAGACAGAATCCCTCAGAGCT-G---T---TA--AT--CTCAG-GTCTGGCACAA------------------AA------------G-G---CATCATTAAAATG-CCCTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------C-AATCTGTTGGCTGCTAACTTTT-TGTTCAAGTTCTTTGAAGTGTTGATGCT------GCTCTCCATCCC-TTTCCCCTGTTT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524384 239 + 133850159 gggaaacctctc--------tctttcctggattcaa-----------acggtgtaattagcggc-agggcgta----tttatt--------tggcatttggagacagaatccctcagagcc-g---t---ta--at--ctcag-gtctggcacta------------------aa------------g-g---catcattaaaatg-ccctttaggtcgcatgggagcagtagata-atgg-g----atgc-----------------c-aatctgttggcttctaa--ctt-tgttcaagttctttgaagtgttgatgCT------GCTCTCCATCCC-TTTCCCCTGTTT
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6386844 247 + 135739771 GGGAGACCTCTC--------TCTTTCCTGGATTCAA-----------ACTGTGTAATTAGCGGC-AGGGCGTA----TTTATTTGGTCTGCTGGCATTTGGAGAGAGAATCCCTCAGAGCC-G---T---TA--AT--CTCAG-GTCTGGCACTA------------------AA------------G-G---CATCATTAAAATG-CCCTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------c-aatctgttggcttctaa--ctt-tgttcaagttctttgaagtgttgatgct------gctctccatccc-tttcccctgttt
i GCA_965140285.1.OZ223564.1        n 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518107 247 -   2470581 GAGAGAAATCTC--------TCTTTCTTGGATTCAA-----------AAGGTGTAATTAGAGGC-AGGGCATA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTTAGAGCT-G---T---CA--AT--CTCAG-GTCTGGCACAA------------------AG------------G-G---CATCATTAAAATG-CCCTTTTGGTCACATGGGAGCGGTAGATA-GTGG-G----ATG-------------C----C-AATTTGTTGGCTTCTAA--CTT-TGTTCAAGTTCTTTGAAGCGGTGATTCT------GCTCTCCATTCC-TTTCCCCTGTTT
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581118 247 + 131075015 GGGAAACCTCTC--------TCTTTCCTGGATTCAA-----------ACGGTGTAATTAGCGGC-AGGGCGTA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTCAGAGCC-G---T---TA--AT--CTCAG-GTCTGGCACTA------------------AA------------G-G---CATCATTAAAATG-CCCTTTAGGTCGCATGGGAGCAGTAGATA-ATGG-G----ATGC-----------------C-AATCTGTTGGCTTCTAA--CTT-TGTTCAAGTTCTTTGAAGTGTTGATGCT------GCTCTCCATCCC-TTTCCCCTGTTT
i GCA_965140295.1.OZ223117.1        C 0 I 61
s GCA_032164245.1.JAVMKO010000006.1   1915416 252 - 106994437 GAGAGACATCTC--------TCTTTCTCGGATTCAA-----------AAGATGTAATGAGAGGC-AGGGCGTA----TTTATTTGGTTTGCTGGCATTTGGTGACAGAATCCCTTAGAGCT-G---T---CA--AC--CTCAA-TTCTGGCACAA------------------AG------------G-G---CATCATTAAAATG-CCCTTTAGGTTACATGGGAGCAGTAGATA-GTTG-G----ATGCATAACTAACTAAC----T-AATCTGTTGGCTTCTAA--GTT-TGTACAAGTTCT--------TTGATGCT------GCTCTCCATCAC-TTTCCCCTGTTT
i GCA_032164245.1.JAVMKO010000006.1 I 706 I 67
s GCF_007399415.2.NC_044325.1       124974509 244 + 155918640 gagagacatctc--------TCTTTCTTGGATTCAA-----------AAGGAGTAATTAGAGGC-AGGGCGTA----TTTATTTGGTCTGCTTGCATTTGGAGACAGAATCCCATAGA----G---T---CA--AT--CTCAG-GTctggcacaa------------------ag------------g-g---catcattaaaatg-ccctttaggtcacatgggagcagtagata-gcgg-g----atgc-----------------c-aatctgttggcttctaa--ctt-tgttcaagttctttgaagcactgatggt------gctctccatccc-tttcccctgttt
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1         3081796 247 + 162938067 gagagacatctc--------tctgtcctggattcaa-----------aaggagtaattagaggc-agggcgta----tttatgtggtctgcaggcatttggagacagaatcccttagagct-g---t---ca--at--ctccc-acctggcacaa------------------ag------------g-g---catcattaaaatg-ccctttaggtcacatgggagcagtagata-gtgg-g----atgc-----------------c-aatctgatggcttctaa--ctt-tgttcaagttccttgaagtattgatgct------gctttccatccc-tttcccctgttt
i GCF_025201925.1.NC_066621.1       I 123 I 35598
s GCA_045781085.1.CM099110.1          2263563 247 + 145055026 GAGAGACATCTC--------TCTTTCTTGGATTCAA-----------ACGGCATAATTAGAGGC-AGGGCATA----TTTATTTGGTCTGCTGGCATTTGGAGACAGAATCCCTCAGAGCA-A---T---CA--AT--CTCAC-GCCTGGCACGA------------------AG------------G-G---CATCATTAAAATG-CCCTTTAGTTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------C-AATCTGTTAGCTTCTAA--CTT-TGTGCAAGTTCTCTGAAGCGTTGATGCT------GCTCTCTATCCC-TTTGCCCTCTTT
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504544 247 + 154637676 GAGAGACATCTC--------TCTTTCTCGGAGTCAA-----------AAAGTGTAATTAGAGGC-AGGGCGTA----TTTATTTGGTCTGCAGGCATTTGGAGACAGAATCCCTTAGAGCT-G---T---CA--AT--CTCAC-GTCTGGCACAA------------------AG------------G-G---CATCATTAAAATG-CCCTTTAGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------C-AATCTGTTGGCTTCTAA--GTT-TGTTCAAGTTCTTTGAAGCGTTGATTCT------CCTCTCCATCCC-TTTCCCCTGTTT
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1959856 247 - 158421364 GAGAGACATCTC--------TCTTTCTTGGATTCAA-----------AAAGTGTAATTCGAGGC-AGGGCGTA----TTTATTTGGTCTGCAGGCATTTGGAGACAGAATCCCTTAGAGCT-G---T---CA--AT--CTCAC-GTCGGGCACAA------------------AG------------G-G---CATCATTAAAATG-CCCTTTCGGTCACATGGGAGCAGTAGATA-GTGG-G----ATGC-----------------C-AATCTGTTGGCTTCTAA--CTT-TGTTCAAGTTCTTTGAAGCGTTGATGCT------GCTCTCCATCCC-TTTCCCCTGTTT
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592323 239 + 312449569 CTGAGAC--CTT--------TCTATCTTTAAGTGAACTG----ATAGGAAGTCTAATTAGATGT-GTGGCATA----TGTACTTAGGCTCTTGGCATAACATGATAGAATCTCTCAGAAAATG---T---AA--TT--GCCAG-GACAGG-GTAA------------------AG------------G-C---GTGTATTAAAATG-CCCACTTGGTCTTTAGGGAGCATGAAGTA-ATTA-A----ATGC-----------------C-AAAAGCTT---TTCA-----------TCATGGAAGTGGAAGTGGTAGTGCT------TCTCTTCATCC---TTCCTCCCATT
i GCA_030020295.1.CM057590.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3490830 236 - 127301102 GAGAGACATCTC--------TCTTTCTTGGGTTCAA-----------AAGGCATAGTAAGAGGC-AGGGTGTA----TTTATCTGGCGTGCTTGCGTGTGCAGACACAATCCCGTAGAGCT-G---T---CA--AT--CTCAG-GCCAGGCTCAA------------------AG------------G-G---CATTATTAAAATG-CATTTTAGGTCAACTGGGATCTGTAGATC-ATTT-G----ATGC-----------------C-AAGCCATTGGCTTTAAA--GTT-TGAGCAAGTTCTTTAAAGTGTTGTT--G------TGTCTCTATCTC-TTT---------
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174512820 239 + 307635815 CTGAGAC--CTG--------TCTATCTTTAACTGAACTG----ATAGGAAGTCTAATTAGACAT-GTGCCATA----TGTACTTAGGCTCTTGGCATAATATGATAGAATCTCTCATAAAA-A---T---AA--TT--GCCAG-GTCAGG-GTAG------------------CA------------G-C---GTGTATTAAAACA-CCCACTTGGTCTTTAGGGACCATGAAGTA-ATTA-G----ATGC-----------------CAAAAAGTTT---TTCA-----------TCATGGAAGCGGAAGTGCTACTGCT------TCTCTTCATCC---TTCCTCCCTTT
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111012485 230 + 311452600 GAGACACA------------TCTTTCTTGGATTCAA-----------AAGAGGTAATTAGAGGC-AAGCTGTA----TTTATTTCATCAGCTGACATTTGGAGACAGAATCCCATAGAGCT-T---T---CA--AT--CTCAG-GTCAGGCA-AA------------------AA------------A-G---CATCATTAAAATG-CCCTTTAAGTCACATGGGAGCAGGAGATA-ATTT-G----A-------------------------------GCTTCAAA-GCGT-GGTTCAAATTCTTTGAAGTGTGGAAACG------TGTCTTTATCCC-TTTCCTATGTTT
i GCA_040894355.2.CM105055.1        C 0 I 47
s GCA_045364815.1.CM098526.1        180811352 249 + 406759874 AAG----A------------TGGTTCATGGATTAAGATGGTTCATGTAAAGTGGAATTAGAGGC-AAGTTATA----TTTATTTGGTCTGCTGTCATTTGGGGAGAGAATCCCTCTGAGCT-C---C---TA----ATCTCAG-GTCAGGAACAA------------------AG------------A-A---CATCATTCAAATG-TCATTTTGGTCTCCTGGCAGCAAGAGAT--AACT-G----TTGC-----------------C-AATATATTGTCTTCAAA--TGC-TGTTCAAGTTTTTTGAA------ATGCTAAGGCATCTCTTTATCCA-TTCCCTATTGCT
i GCA_045364815.1.CM098526.1        I 147 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10508 61 +     31630 tatgtattctataaatctgaa-cc--tcCCCCGGCAAGAATTACTTCCAGTCGGGAGTTAATGT
s GCA_965152275.1.OZ223944.1          5066661 61 + 132879417 tatgcattctataaatctgaa-cc--tcCCCCGGCAAGAATTACTTCCAGTCGGGAGTAAATGT
i GCA_965152275.1.OZ223944.1        I 398 n 720
s GCA_965152235.1.OZ223887.1        131410052 61 - 134836623 TGTGCATTCTATAAATCTGAA-CC--TCCCCCAGCAAGAATTACTTCCAGTCGGGAGTAAATGT
i GCA_965152235.1.OZ223887.1        n 0 n 0
s GCF_009764565.3.NC_050073.1       128188977 62 - 131128815 TATGCATTCTATAAATCTGAA-CCT-CCCCCTAGCAAGAATTACTTCCAGTCGGGAGTAAATGT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524623 61 + 133850159 TGTGCATTCTATAAATCTGAA-CC--TCCCCCAGCAAGAATTACTTCCAGTCGGGAGTAAATGT
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6387091 61 + 135739771 tatgcattctataaatctgaa-cc--tcccccagcaagaattacttccagtcgggagtaaatgt
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    518354 56 -   2470581 AATGCATTCCATAAATCTGAA-CCT-CCCCCCAGCAAGAATTACTTCCAGTCAGGA------GT
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128274962 61 - 131075015 TATGCATTCTATAAATCTGAA-CC--TCCCCCGAGAAGAATTACTTCCAGTCAGGAGTAAATGT
i GCA_965140295.1.OZ223117.1        I 1434 I 13
s GCA_032164245.1.JAVMKO010000006.1  95614285 62 + 106994437 TATGCATTCCATGAATCCAAA-CCT-TCCCCCAGCAAGAATTCCTTCCAGTCGGGAGTAAATGt
i GCA_032164245.1.JAVMKO010000006.1 I 11663 T 11407
s GCF_007399415.2.NC_044325.1       124974753 60 + 155918640 tatgcattccataaatctaaa-ccT-tcccccaggaagaattgcttccagtcaggagtaaat--
i GCF_007399415.2.NC_044325.1       C 0 T 46132
s GCF_025201925.1.NC_066621.1         3117641 60 + 162938067 tatgcattccataaatctaaa-ccT-tcccccaggaagaattgcttccagtcaggagtaaat--
i GCF_025201925.1.NC_066621.1       I 35598 T 25781
s GCA_045781085.1.CM099110.1          2263810 51 + 145055026 -----------TAAATCTGAA-CCT-CCCCCTAGCAAGAATTATTTCCAGTCAGGAGTAAATGT
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504791 62 + 154637676 TATGCATTCCATAAATCTGAA-CCT-CCCCCTAGCAATAATTACTTCTAGTCAGGAGTAAATGT
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960103 62 - 158421364 TATGCATTCCATAAATCTGAA-CCT-CCCCCTAGCAATAATTACTTCCAGTCAGGAGTAAATGT
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592562 59 + 312449569 TATGGAGTCCAAAAATGAGAACAT-----CTTGACTAAAAGCAATACTAATAAAGATAATGCAT
i GCA_030020295.1.CM057590.1        C 0 I 1
s GCA_033958435.1.CM066698.1          3491066 58 - 127301102 ----CACTCCATAAATCTGAA-CCT-CCCCTTAGGACGAAGTACTTCCCAACAGAAGTAAATTT
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174513059 58 + 307635815 TATGGAGTCcaaaaatgagaa-at-----cttgactaaaagcaatactaataaagataatgcat
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        200435332 55 - 311452600 tatgCAGTCCATAAATCTGAA-AAT-CCCCC-------AAGCACTTCCAATCAGGAATAAACtt
i GCA_040894355.2.CM105055.1        n 47 I 22248
s GCA_045364815.1.CM098526.1        180811601 55 + 406759874 TATGCAGTCCATATATCTCAA-AAT-CCCCT-------GAGGACTTTTAATCAGTAATAAATTT
i GCA_045364815.1.CM098526.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10569 13 +     31630 GGG----------------AATGTTTatt
s GCA_965152275.1.OZ223944.1          4555788 13 + 132879417 GGG----------------AACGTTtatt
i GCA_965152275.1.OZ223944.1        n 720 C 0
s GCA_965152235.1.OZ223887.1          3242089 13 + 134836623 GGG----------------AATGTTtatt
i GCA_965152235.1.OZ223887.1        I 434 C 0
s GCF_009764565.3.NC_050073.1       128189039 13 - 131128815 GGG----------------AAAGTTTATT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524684 13 + 133850159 GGG----------------AATGTTTATT
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888635 13 + 135739771 GGG----------------AATGTTTATT
i GCA_965140285.1.OZ223564.1        n 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    518410  5 -   2470581 ------------------------TTATT
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581426 13 + 131075015 GGG----------------AATGTTTATT
i GCA_965140295.1.OZ223117.1        I 61 I 137
s GCA_032164245.1.JAVMKO010000006.1  95602940  5 + 106994437 ------------------------ttatt
i GCA_032164245.1.JAVMKO010000006.1 T 11407 I 11509
s GCF_007399415.2.NC_044325.1       124928681 13 + 155918640 gga----------------aaagtttatt
i GCF_007399415.2.NC_044325.1       T 46132 C 0
s GCF_025201925.1.NC_066621.1         3091920 13 + 162938067 gga----------------aaagtttatt
i GCF_025201925.1.NC_066621.1       T 25781 T 9827
s GCA_045781085.1.CM099110.1          2263861 13 + 145055026 GGA----------------AAAATTTATT
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504853 13 + 154637676 GGA----------------AACGTTTATT
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960165 13 - 158421364 GGA----------------AAAGTTTATT
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592622 11 + 312449569 GGC----------------ATATttt--t
i GCA_030020295.1.CM057590.1        I 1 C 0
s GCA_033958435.1.CM066698.1          3491124 13 - 127301102 GGA----------------AATGTTTCTC
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174513117 11 + 307635815 ggt----------------gtatttt--t
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111012762 13 + 311452600 GGA----------------AAAGTTTATT
i GCA_040894355.2.CM105055.1        I 47 C 0
s GCA_045364815.1.CM098526.1        180811656 13 + 406759874 gga----------------atttttcttt
i GCA_045364815.1.CM098526.1        C 0 I 10205

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10582 102 +     31630 gaa------aatgcattttcc--attaca-tt-tatttaattattt-tgtaattgcagagaaaataagaatggagtcattcataacactg---ttttttt---GAGAGCCCAGAGATAG
s GCA_965152275.1.OZ223944.1          4555801 102 + 132879417 gaa------aatgcattttcc--attaca-tt-tatttaattattt-tgtaattgcagagaaaataaGAATGGAGTCATTCATAACACTG---TTTTTTT---GAGAGCCCAGAGATAG
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          3242102 102 + 134836623 gaa------aatgcattttcc--attaca-tt-tatttaattattt-tgtaattgcagagaaaataagaatggagtcattcataacactg---ttttttt---gagagcccagagacag
i GCA_965152235.1.OZ223887.1        C 0 I 33
s GCF_009764565.3.NC_050073.1       128189052 102 - 131128815 GAA------AATGCATTTTCC--ATTACA-TT-TATTTAATTATTT-TGTAATTGCAGAGAAAATATGAATTGAGTAATTCATAACACTG---TTTTTTT---GAGAGCCCAGAGATAG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524697 105 + 133850159 GAA------AATGCGTTTTCC--attaca-tt-tatttaattattt-tgtaattGCAGAGAAAATAAGAATGGAATCATTCataacactgTTTttttttt---gagAGCTCAGAGACAG
i GCA_965140235.1.OZ222813.1        C 0 I 33
s GCA_965140285.1.OZ223564.1          6387165 102 + 135739771 gaa------aatgcattttcc--attaca-tt-tatttaattattt-tgtaacTGCAGAGAAAATAAGAATGGAGTCATTCATAACACTG---ttttttt---GAGAGCCCAGAGACAG
i GCA_965140285.1.OZ223564.1        n 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    518415 102 -   2470581 GAA------AATGCATTTTCC--GTTACA-TT-TACTGAATTATTG-TGTAATGGCTGAGAAAATAAGAATTGAGTCATTCATGACACTG---GTATTTT---GAGAGCCCAGAGATAG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128275036 102 - 131075015 gaa------aatgcattttcc--attaca-tt-tatttaattattt-tctaatTGCAGAGAAAATAAGAATGGAGTCTTTCATAACACTG---ttttttt---GAGAGCCCAGAAATAG
i GCA_965140295.1.OZ223117.1        I 13 C 0
s GCA_032164245.1.JAVMKO010000006.1   1915735 102 - 106994437 gaa------aatgcattttcc--attaca-tt-tactgaattattt-tgtacttactggGAAAATAAGAATTGAGTCATTCATGTCACTG---GTATTTT---GAGAACCTAGAGATAG
i GCA_032164245.1.JAVMKO010000006.1 I 67 I 12805
s GCF_007399415.2.NC_044325.1       124928694 106 + 155918640 gaa------aattcattttct--gttaca-tt-tatttaattattt-tgtatgtgCAGAGAAAATTAGAATTGAGTCATTCATAACACTGG--TTTTTTTTTTGAAAGCCCAGAGatag
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1         3082106 102 + 162938067 gaa------aatgcattttct--gttaca-tt-tatttaattcttt-tgtaactgcagagaaaatcagaattgagtcattcataacactg---ttttttt---gaaagcccagagatag
i GCF_025201925.1.NC_066621.1       T 9827 I 35602
s GCA_045781085.1.CM099110.1          2263874 102 + 145055026 GGA------AATACATTTTCT--Gttaca-tt-tatttaattattt-tgtaattGCAGAGAAAATTAGAATTGAGTCATTCATAACACTG---ttttttt---GAAAGCCCAGAGATAG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504866 103 + 154637676 GAA------AATGCATTTTCT--GTTACATTT-TTTTTAATTATTT-TGTAATTGCGGAGAAAATTAGAATTGAGTCATTCCTAACACTG---GTTTTTT---GAGAGCCCAGAGACAG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960178 102 - 158421364 GAA------AATGCATTTTCT--GTTACA-TT-TATTTAATTATTT-TGTAATTGCGGAGAAAATTAGAATTGAGTCATTCCTAACACTG---GTTTTTT---GAGAGCCCAGAGATAG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592633  87 + 312449569 gaa------aatgcattttttCAattatt-ttAtatttaattgatt-tataat------------------ggatttaatttagaAATCA---GTAGTGT---GACAGTCCAATATTAG
i GCA_030020295.1.CM057590.1        C 0 C 0
s GCA_033958435.1.CM066698.1          3491137 102 - 127301102 GGA------AATGCATTTCCT--GTTACA-TT-TGTTCAATGATTT-CGGAATAGCTGAGAGAACAAAAATTGAGTCCTTTGTGACACTA---GTATTTT---GAGAGCCTGGAGACAG
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCF_030867095.1.NC_081825.1       174513128  87 + 307635815 gaa------aatgcattttttCAattatt-ttAtatttaattgatt-tataat------------------ggatttaatCTGGACATCA---GTAGTGT---GACAGTTCAATATTAG
i GCF_030867095.1.NC_081825.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111012775 102 + 311452600 GAA------AAGGCAtacttt--gttatg-tt-tatttaattattt-attaattgatgAGAAAAGAAGAATGGAGTCATTCCTGACATTG---GGATTTT---GAGAACCCAGGGTTAG
i GCA_040894355.2.CM105055.1        C 0 C 0
s GCA_045364815.1.CM098526.1        180821874  74 + 406759874 gag------ACTGCTGGGTTT--GTT-TA-TA-TATTAGGATTAAG-TGGCATTTTGA---------GGCTGGAATT----------CCA---GGGT--------TGCCTCAGAGT---
i GCA_045364815.1.CM098526.1        I 10205 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10684 34 +     31630 AAAACTTTAT-AAGCAGTTACCATGTAGAATGCAA
s GCA_965152275.1.OZ223944.1          5066837 34 + 132879417 AAAACTTTAT-AAGCAGTTACCATGTAGAATGCAA
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1        120605045 34 - 134836623 AAAACTTTAT-AAGCAGTTACCACGTAGAATGCAA
i GCA_965152235.1.OZ223887.1        n 33 I 332
s GCF_009764565.3.NC_050073.1       128189154 33 - 131128815 -AAACTTTAT-AAGCAGTTACCACGTAGGATGCAA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130125875 34 - 133850159 AAAACTTTAT-AAGCAGTTACCACGTAGAATGCAA
i GCA_965140235.1.OZ222813.1        I 1609 I 334
s GCA_965140285.1.OZ223564.1        131483337 34 - 135739771 AAAACTTTAT-AAGCAGTTACCACGTAGAATGCAA
i GCA_965140285.1.OZ223564.1        I 1625 I 12785
s GCA_033349115.1.JAVFKW010000008.1    518517 33 -   2470581 -AAACTTTAT-AAGCAGTTACCACATAGAATGCAA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1        128275138 34 - 131075015 AAAACTTTAT-AAGCAGTTACCACGTAGAATGCAA
i GCA_965140295.1.OZ223117.1        C 0 I 334
s GCA_032164245.1.JAVMKO010000006.1  95614454 33 + 106994437 -AAACTTTAT-AAGCAGTTACCGGAGAGAATGCAA
i GCA_032164245.1.JAVMKO010000006.1 I 11509 T 11407
s GCF_007399415.2.NC_044325.1       124928800 33 + 155918640 -aaactttat-aagcagttaccaggtagaatgcaa
i GCF_007399415.2.NC_044325.1       C 0 I 46128
s GCF_025201925.1.NC_066621.1         3117810 33 + 162938067 -aaactttat-aagcagttaccaggtagaatgcaa
i GCF_025201925.1.NC_066621.1       I 35602 C 0
s GCA_045781085.1.CM099110.1          2263976 33 + 145055026 -AAACTTTAG-AAGCAGTTACCAGGTAGAATGCAA
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3504969 33 + 154637676 -AAACTTTAT-AAGAAGTTTGCAGATAGAATGCAA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960280 33 - 158421364 -AAACTTTAT-AAGCAGTTTCCAGATAGAATGCAA
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179592720 22 + 312449569 -AAAATTTCT-GTCCTGTTTTCAG-----------
i GCA_030020295.1.CM057590.1        C 0 I 12146
s GCA_033958435.1.CM066698.1          3491239 33 - 127301102 -AAACTTTAA-AAGCAGTTTCCAGACAGAATGCAA
i GCA_033958435.1.CM066698.1        C 0 I 12
s GCF_030867095.1.NC_081825.1       174513215 22 + 307635815 -AAACTTTCT-ATCCAGTTTTCAG-----------
i GCF_030867095.1.NC_081825.1       C 0 I 12168
s GCA_040894355.2.CM105055.1        111012877 33 + 311452600 -AAACTTTAA-AAGCAGTTTCCAGGAAGAATGCAA
i GCA_040894355.2.CM105055.1        C 0 I 12
s GCA_045364815.1.CM098526.1        180821948 25 + 406759874 -----TCTACAAAGCAGGCT-----AAGCACATAT
i GCA_045364815.1.CM098526.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10718 7 +     31630 TGGATCA
s GCA_965152275.1.OZ223944.1          4555937 7 + 132879417 TGGATCA
i GCA_965152275.1.OZ223944.1        n 0 C 0
s GCA_965152235.1.OZ223887.1          3242237 7 + 134836623 tggatca
i GCA_965152235.1.OZ223887.1        I 33 C 0
s GCF_009764565.3.NC_050073.1       128189187 7 - 131128815 TGGATCA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524835 7 + 133850159 TGGATCA
i GCA_965140235.1.OZ222813.1        I 33 C 0
s GCA_965140285.1.OZ223564.1          3888785 7 + 135739771 TGGATCA
i GCA_965140285.1.OZ223564.1        n 12785 C 0
s GCA_033349115.1.JAVFKW010000008.1    518550 7 -   2470581 TGGATCA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581576 7 + 131075015 TGGATCA
i GCA_965140295.1.OZ223117.1        I 137 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603080 7 + 106994437 TGGATCA
i GCA_032164245.1.JAVMKO010000006.1 T 11407 I 11407
s GCF_007399415.2.NC_044325.1         1441410 7 - 155918640 tggatca
i GCF_007399415.2.NC_044325.1       T 67109 I 160
s GCF_025201925.1.NC_066621.1         3117843 7 + 162938067 tggatca
i GCF_025201925.1.NC_066621.1       C 0 I 133
s GCA_045781085.1.CM099110.1          2264009 7 + 145055026 TGAATTG
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3505002 7 + 154637676 TGGATTG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960313 7 - 158421364 TGGATTG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_030020295.1.CM057590.1        179604888 1 + 312449569 ------C
i GCA_030020295.1.CM057590.1        I 12146 N 0
s GCA_033958435.1.CM066698.1          3491284 7 - 127301102 TGAATCC
i GCA_033958435.1.CM066698.1        I 12 C 0
s GCF_030867095.1.NC_081825.1       174525405 1 + 307635815 ------C
i GCF_030867095.1.NC_081825.1       I 12168 N 0
s GCA_040894355.2.CM105055.1        111012922 7 + 311452600 TGGATCA
i GCA_040894355.2.CM105055.1        I 12 C 0
s GCA_045364815.1.CM098526.1        180821973 7 + 406759874 GAGATCA
i GCA_045364815.1.CM098526.1        C 0 I 24896

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10725 137 +     31630 GGATTAAGA-----TGCTT-CT--TT--CCCC-CC----AA---GAGATGTCTAAAAGCCTG-------GGA----------TTGGAGT-GGG-ACAAAtg-------------gctggagat-caggactgaggggca--------ctggcagactcagg-gattcagaaagggCTGCAGTAGC-------------CTAGAGTGATGC
s GCA_965152275.1.OZ223944.1          4555944 138 + 132879417 GGATTAAGA-----TGCTT-CT--TTT-CCCC-CC----AA---GAGATGTCTAAAAGCCTG-------GGA----------TTGGAGT-GGG-AAAAATg-------------gctggagat-caggactgaggggca--------ctggcagactcagg-gattcagAAAGGGCTGCAGTAGC-------------CTAGAGTGATGC
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3242244 139 + 134836623 ggattaaga-----tgctt-ct--ttT-cccc-tc----aa---gagatgtctaaaagcctg-------gga----------ttggagtGgga-aaaaatg-------------gctggagat-caggactgaggggca--------ctggcagactcagg-gattcagaaagggctgcagtagc-------------ctagagtgatgc
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128189194 138 - 131128815 GGATTAGGA-----TGTTT-TT--TTT-CACC-CC----AA---GAGATGTCTAAAAACCTG-------GGA----------TTGGAGT-GGG-AAAAATg-------------gctggagat-caggattgaggggca--------ctggcagactcagg-agttcagaAAGGGCTGCAGTAAC-------------CTAGAGTGATGC
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524842 138 + 133850159 GAATTAAGA-----TGCTT-CT--TTT-CCCC-CC----AA---GAGATGTCTAAAAGCCTG-------GGA----------TTGGAGTGGA--AAAAAtg-------------gctggagat-caggactgaggggca--------ctggcagactcagg-ggttcagaaagggctgcagtagc-------------ctagagtgatgc
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888792 138 + 135739771 GAATTAAGA-----TGCTT-CT--TTT-CCCC-CC----AA---GAGATGTCTAAAAGCCTG-------GGA----------TTGGAGTGGG--AAAAATg-------------gctggagat-caggactgaggggca--------ctggcagactCAGG-GATTCAGAAAGGGCTGCAGTAGC-------------CTAGAGTGATGC
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518557 133 -   2470581 GGATTAAGA-----TGCTA-TT--TT---------TT--CA---GAGATGTCTAAAAGCATG-------GGA----------TTGGTGT-AGC-AATAATG-------------GCTGAAGAT-CAGGATTGAGGGGCA--------CTGGCAGACTCATG-GGTTCAGAAAGGGCTGCAATAGC-------------CTAGAGTAATGC
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581583 138 + 131075015 GAATTAAGA-----TGCTT-CT--TTT-CCCC-CC----AA---GAGATGTCTAAAAGCCTG-------GGA----------TTGGAGTGGG--AAAAATg-------------gctggagat-caggactgaggggca--------ctggcagactCAGG-GATTCAGAAAGGGCTGCAGTAGC-------------CTAGAGTGATGC
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95614494 133 + 106994437 GGATTCAGG-----TGGGG-TT--TT---------CT--CA---GAGATGTCAaaaagcctg-------gga----------ttggagt-agc-aaaaatg-------------gctgaagat-caggattgaggggca--------ctgacagaCTCAGG-GGTTCAGAAAGGGCTGCAATCGC-------------CCAGAGTGATGC
i GCA_032164245.1.JAVMKO010000006.1 I 11407 T 11407
s GCF_007399415.2.NC_044325.1       124974961 136 + 155918640 ggattaaga-----tgc---tt--ttT-tttc-cc----ca---gagatgtctaaaagcctg-------gga----------ctggagt-ggc-aaaaatg-------------actgaagat-caggattgagggtca--------ctggcagactcagt-ggttcagaaagagctgcaatagc-------------atagagtgatgc
i GCF_007399415.2.NC_044325.1       I 46128 C 0
s GCF_025201925.1.NC_066621.1       124865396 136 - 162938067 GGATTAAGA-----TGC---TT--TTT-TTTC-TC----CA---GAGATGTCTAAAAGCCTG-------GGA----------CTGGAGT-GGC-AAAAATG-------------ACTGAAGAT-CAGGATTGAGGGTCA--------CTGGCAGACTCAGT-GGTTCAGAAAGAGCTGCAATAGC-------------ATAGAGTGATGC
i GCF_025201925.1.NC_066621.1       I 455 C 0
s GCA_045781085.1.CM099110.1          2264016 134 + 145055026 GGAttaaga-----tgctt-tt--ttT-tttt-tc----ca---gagatgtCTAAAATCCTG-------GGA----------CTGGAGT-GGC-AAAAATG-------------GCTGAagat-caggattgaggggca--------ctggcagactCGGG-ATTTCAGAAAGGGCTGCAATAGC-------------ATAGAGTA----
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3505009 139 + 154637676 GGATTAAGA-----TGCTT-TT--TTCTTTTC-TT----CA---GAGATGTCTAAAAACCTG-------GGA----------TTGGAGT-GGCAAAAAATG-------------GCTGAAGAT-CAGAG-TGAGGGGCA--------CTGGCAGACTCAAG-GGTTCAGAAAGGGCTGAAATAGC-------------ATAGAGTGATGC
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960320 140 - 158421364 GGATTAAGT-----TGCTT-TT--TTCTTTTC-TT----CA---GAGATGTCTAAAAACTTG-------gga----------ttggagt-ggcAaaaaatg-------------gctgaagat-cagggttgaggggca--------ctggcagattcagg-ggttcagaaagggctgcaatagc-------------atagagtgATGC
i GCF_028017835.1.NC_088686.1       C 0 I 5
s GCA_033958435.1.CM066698.1          3491291 136 - 127301102 AGATTAAGG-----TG----TT--GCTTTTTT-TC----CA---GGGATATCTAAAagcctg-------gga----------ctgtaat-ggc-aaaaatg-------------tctgaagat-caggactggggggca--------ctggcagatgcagg-ggtgcagaaaaggctgcaatagc-------------atggagtgtgga
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        111012929 124 + 311452600 GGATTAAGG-----TG----------T-tttt-tt----tG---GAGCTGTCTAAAAACGTG-------GAA----------TTGGAGT-AGC-AAAAATG-------------GCTGAAGAT-CATGATTGAGGGGCC--------TTGGCAGAGTCAGG-GGTTCAGATA-----GGAATATC-------------ATAAAACAAT--
i GCA_040894355.2.CM105055.1        C 0 I 376
s GCA_045364815.1.CM098526.1        180846876 121 + 406759874 Gaattaagg-----tg----------T-tttt-ttTTTCca---gagatgtCTAAAAAGATG-------GGA----------TTGAAGT-AGC-AAAAATG-------------GCTGAAGAT-GAAGACT----------------------GAGTCAGG-ATTTCAGAGAGGGCTGAAAAAGC-------------ACAGgatgtttt
i GCA_045364815.1.CM098526.1        I 24896 I 742

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10862  5 +     31630 CA---------------A-------------GA
s GCA_965152275.1.OZ223944.1          4556082  5 + 132879417 CA---------------A-------------GA
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3242383  5 + 134836623 ca---------------a-------------GA
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128189332  5 - 131128815 TG---------------A-------------GA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524980  5 + 133850159 ca---------------a-------------ga
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888930  5 + 135739771 CA---------------A-------------GA
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518690  5 -   2470581 AT---------------A-------------GA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581721  5 + 131075015 CA---------------A-------------GA
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603220  5 + 106994437 AT---------------A-------------GA
i GCA_032164245.1.JAVMKO010000006.1 T 11407 C 0
s GCF_007399415.2.NC_044325.1       124975097  5 + 155918640 at---------------a-------------ga
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       124865532  5 - 162938067 AT---------------A-------------GA
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCF_027887155.1.NC_071508.1         3505148  5 + 154637676 AT---------------A-------------GA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1       156434662 20 + 158421364 acAGCCAAAAGGCAATGa-------------gc
i GCF_028017835.1.NC_088686.1       n 5 n 5
s GCA_033958435.1.CM066698.1          3491427  3 - 127301102 ct------------------------------a
i GCA_033958435.1.CM066698.1        C 0 I 340
s GCA_040894355.2.CM105055.1        200457635  2 - 311452600 ag-------------------------------
i GCA_040894355.2.CM105055.1        I 22248 n 376
s GCA_045364815.1.CM098526.1        180847739  2 + 406759874 AA-------------------------------
i GCA_045364815.1.CM098526.1        I 742 N 0
e GCA_045781085.1.CM099110.1          2264150  0 + 145055026 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10867 3 +     31630 GTA
s GCA_965152275.1.OZ223944.1          4556087 3 + 132879417 GTA
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3242388 3 + 134836623 GTA
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128189337 3 - 131128815 GTA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524985 3 + 133850159 gta
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888935 3 + 135739771 GTA
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518695 3 -   2470581 GTA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581726 3 + 131075015 GTA
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603225 3 + 106994437 GTA
i GCA_032164245.1.JAVMKO010000006.1 C 0 C 0
s GCF_007399415.2.NC_044325.1       124975102 2 + 155918640 gt-
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       124865537 2 - 162938067 GT-
i GCF_025201925.1.NC_066621.1       C 0 I 355
s GCF_027887155.1.NC_071508.1         3505153 3 + 154637676 GTA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960465 3 - 158421364 GTA
i GCF_028017835.1.NC_088686.1       I 5 C 0
s GCA_033958435.1.CM066698.1          3491770 3 - 127301102 GTA
i GCA_033958435.1.CM066698.1        I 340 C 0
e GCA_040894355.2.CM105055.1        200457637 376 - 311452600 I
e GCA_045781085.1.CM099110.1          2264150 0 + 145055026 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10870 12 +     31630 ATGGGAT-----GAAGG
s GCA_965152275.1.OZ223944.1          4556090 12 + 132879417 ATGGGAT-----GAAGG
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          3242391 12 + 134836623 ATGGGAT-----GAAGG
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128189340 12 - 131128815 ATGGGAT-----GAAGG
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3524988 12 + 133850159 atgggat-----gaagg
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888938 12 + 135739771 ATGGGAT-----GAAGG
i GCA_965140285.1.OZ223564.1        C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518698 12 -   2470581 ATGGGAT-----GAAGG
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581729 12 + 131075015 ATGGGAT-----GAAGG
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603228 12 + 106994437 ATGGGAT-----GAAGG
i GCA_032164245.1.JAVMKO010000006.1 C 0 C 0
s GCF_007399415.2.NC_044325.1       124975104 12 + 155918640 atgggat-----gaagg
i GCF_007399415.2.NC_044325.1       C 0 T 44857
s GCF_025201925.1.NC_066621.1         3117983 12 + 162938067 ATGGGAT-----GAAGG
i GCF_025201925.1.NC_066621.1       I 133 T 14484
s GCA_045781085.1.CM099110.1          2264150 12 + 145055026 ATGGGAT-----GAAAG
i GCA_045781085.1.CM099110.1        C 0 I 3
s GCF_027887155.1.NC_071508.1         3505156 12 + 154637676 ATGGGAT-----GAAGG
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960468 12 - 158421364 ATGGGAT-----GAAGG
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3491773 12 - 127301102 ACGAGAT-----GAGGA
i GCA_033958435.1.CM066698.1        C 0 C 0
e GCA_040894355.2.CM105055.1        200457637 376 - 311452600 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10882 3 +     31630 GCA
s GCA_965152275.1.OZ223944.1          4556102 3 + 132879417 GCA
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1          3242403 3 + 134836623 GCA
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128189352 3 - 131128815 GCA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3525000 3 + 133850159 gca
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          3888950 3 + 135739771 GCA
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    518710 3 -   2470581 GCA
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581741 3 + 131075015 GCA
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603240 3 + 106994437 GGA
i GCA_032164245.1.JAVMKO010000006.1 C 0 I 11560
s GCF_007399415.2.NC_044325.1       124930259 3 + 155918640 GCT
i GCF_007399415.2.NC_044325.1       T 44857 I 45025
s GCF_025201925.1.NC_066621.1         3103511 3 + 162938067 gct
i GCF_025201925.1.NC_066621.1       T 14484 I 14485
s GCF_027887155.1.NC_071508.1         3505168 3 + 154637676 GCA
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960480 3 - 158421364 GCA
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3491785 3 - 127301102 GCA
i GCA_033958435.1.CM066698.1        C 0 C 0
e GCA_040894355.2.CM105055.1        200457637 376 - 311452600 I
e GCA_045781085.1.CM099110.1          2264162 3 + 145055026 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        10885 167 +     31630 T--GGCCT----------------GGGACATATCTCACCCTATATCAGCAATAATGTGTGTGTGTCTCTAGT--AGTGATGATGAAATGGAA-TTAAAAAATACCAGGATGAGCATGTCATGACAGAGACCAACAACTTGTGATTCTACTATggaaaatcattcctcactgatctgctataattcttt
s GCA_965152275.1.OZ223944.1          5067039 167 + 132879417 T--GGCCT----------------GGGACATATCTCACCCTATATCAGCAATAATGTGTGTGTGTCTCTAGT--AGTGATGATGAAATGGAA-TTAAAGAATACCAGGATGAGCATGTCATGATAGAGACCAACAACTTGTGATTCTACTATggaaaatcattcctcactgatctgctataattcttt
i GCA_965152275.1.OZ223944.1        n 0 C 0
s GCA_965152235.1.OZ223887.1          3242406 167 + 134836623 T--GGCCT----------------GGGACATATCTCACCCTATATCAgcaataatgtgtgtgtgtgtctaat--agtgatgatgaaatggaA-TTAAAAAATACCAGGATGAGCATGTCAtgatagagactaacaacttgtgattctactatggaaaatcattcctcatcgatctgctataattattt
i GCA_965152235.1.OZ223887.1        C 0 I 172
s GCF_009764565.3.NC_050073.1       128189355 165 - 131128815 T--GGCCT----------------GGGACATATCTCACCCTATATAAGCAATAATGTGTGTGTCTCTCTAGT--AGTGATGATGAAATGGAA-TTAAAAAATACTAGGATGAGCATGTCATGATAGAGACTAACAACTTGTGATTCTACTATggaaaatcattcctcattgatctgctataatttt--
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3525003 167 + 133850159 t--ggcct----------------gggacatatctcaccctatatcagcaataatgtgtgtgtgtctctaat--agtgatgatgaaatggaa-ttaaaaaataccaggatgagcatgtcatgatagagactaacaacttgtgattctactatggaaaatcattcctcatcgatctgctataattcttt
i GCA_965140235.1.OZ222813.1        C 0 I 172
s GCA_965140285.1.OZ223564.1          6387468 167 + 135739771 T--GGCCT----------------GGGACATATCTCACCCTATATCAGcaataatgtgtgtgtgtctctaat--agtgatgatgaaatggaA-TTAAAAAATACCAGGATGAGCATGTCATGATAGAGACTAACAACTTGTGATTCTACTATGGAAAATCATTCCTCATCGATCTGCTATAATTCTTT
i GCA_965140285.1.OZ223564.1        n 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    518713 170 -   2470581 T--GGCCT----------------GGGGCATATCTCACCCTACATAAGCAATAATGTGTGTGTCTCTCTAGTAAAGTGATGATGAAATGGAATTTAAAAAATCCCAGGATGAGCATGTCATGATAGGGACTAACAACTTGTGATTCTTCTATggaaaatcattcctcattgatctactataattcttt
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_965140295.1.OZ223117.1          2581744 167 + 131075015 T--GGCCT----------------GGGACATATCTCACCCTATATCAGcaataatgtgtgtgtgtctctaat--agtgatgatgaaatggaA-TTAAAAAATACCAGGATGAGCATGTCATGATAGAGACTAACAACTTGTGATTCTACTATGGAAAATCATTCCTCATCGATCTGCTataattcttt
i GCA_965140295.1.OZ223117.1        C 0 I 172
s GCA_032164245.1.JAVMKO010000006.1   1928642 167 - 106994437 T--GGCCT----------------GGGGCATATCTCACCCTATATAAGCAATAATGTGTGAGCCTCTCTAGT--AGTGATGATGAAAAGGAA-TTAAAAAATACCAGGATGAGCAGGTCATGATAGGGATTAAcaacttgtgattctactatggaaaatcattcctcattgatctactatcattcttc
i GCA_032164245.1.JAVMKO010000006.1 I 12805 T 12089
s GCF_007399415.2.NC_044325.1         1441577 167 - 155918640 ---ggctg----------------ggggcatatctcaccctatataagcaataatgtgtgcatctctctagc--tgtgatgatgaaatggaaTttaaaaaataccaaaatgagcatgtcaaaatagggaccagcaacttgtgattctactacagaaaatcattcctcagttatctactataattcttt
i GCF_007399415.2.NC_044325.1       I 160 I 171
s GCF_025201925.1.NC_066621.1         3117999 167 + 162938067 ---GGCTG----------------GGGGCATATCTCACCCTATATAAGCAATAATGTGTGCATCTCTTTAGC--TGTGATGATGAAGTGGAATTTAAAAAATACCAAGATGAGCATGTCAAAATAGGGACTAGcaacttgtgattctactacagaaaatcattcctcagttatctactataattcttt
i GCF_025201925.1.NC_066621.1       I 14485 C 0
s GCA_045781085.1.CM099110.1          2264165 167 + 145055026 T--GGCTG----------------GGGGCATATCTCACCCTATATAAGCAATAATGTGTGTGTCTCTTTAGC--AGTGATGATGAAATGGAA-TTAAAAAATACCAGGATGAGCATGTCAAGATAGGGACTAGCAACTTGTGGTTCTACTATAGAAAATCATTCCTCATTGATCTACTATAATTCTTT
i GCA_045781085.1.CM099110.1        I 3 C 0
s GCF_027887155.1.NC_071508.1         3505171 166 + 154637676 T--GGCTG----------------GGA-CATATCTCACCCTATATAAGCGATAATGCGTGTGTCTCTCTAGT--AGTGATGATGaaatggaa-ttaaaaaataccaggatgagcatgtcatgatagggactaacgacttgtgattctactatggaaaatcattcctcatttatctactataattcttt
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960483 167 - 158421364 T--GGCTG----------------GGGGCATATCTCACCCTATATAAGCGATAATGTGTGTGTCTCTCTAGA--AGTGATGATGAAATGGAA-TTAAAAAATACCAGGATGAGCATGTCATGATAGGGACTAATGACTTGTGATTCTACTATggaaaatcattcctcatttatctactataattcttt
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_033958435.1.CM066698.1          3491788   7 - 127301102 A--GGCAT----------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_033958435.1.CM066698.1        C 0 N 0
s GCA_040894355.2.CM105055.1        111013429 148 + 311452600 ------------------------------CAGTTCAGTCGATATGAGCCATAAAGTTTGTGTCTCCCTAGT--AGT-ATgatgaaatggaa-tgaaaaaataCCAAGATGAGCATGTCATGATAGGAACTGACAAATTCATATTCCACTAAGGAAAATCATTTTTCATTGATCTAC------TTCTT
i GCA_040894355.2.CM105055.1        I 376 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        11052 176 +     31630 cttttattttgtcgacaaaagagtgaatatgtggggaaccatctgacataatatacttggactttctttgacaaagtccctcacatgagactattaaggaagttaggtaggcatggaataagaggcaaaatgctgtcaagaatgagaaactggttacgcaacaggaaacaa-GTGCA
s GCA_965152275.1.OZ223944.1          5067206 176 + 132879417 cttttattttgtcgacaaaagagtgaatctgtggggaaccatctgacataatatacttggactttctttgacaaagtccctcacatgaggctattaaggaagttaggtagtcatggaataagaggcaaaatgctgtcaagaatgagaaacgggttacgcaacaggaaacaa-gtgca
i GCA_965152275.1.OZ223944.1        C 0 I 930
s GCA_965152235.1.OZ223887.1        120605411 172 - 134836623 t----attttgtcgacaaaagagtgaatatgtggggaaccatctgacataatatacttggactttctttgacaaagtccctcacatgaggctattaaggaagttaggtagtcatggaataagaggcaaaatgctgtcatgaatgagaaactggttacacaacaggaaacaa-gtgca
i GCA_965152235.1.OZ223887.1        I 332 I 12193
s GCF_009764565.3.NC_050073.1       128189520 171 - 131128815 -----attttgttgacaaaagagtgaatatggggggaaccatctgacgtaatatacttggactttctttgacaaagtcattcacatgaggctattaaggaagttaggtagtcatggaataagaggcaaaatgctttcatgaatgagaaactggttacgcaacaggaaacaa-gtgcc
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130126243 172 - 133850159 t----attttgttgacaaaagagtgaatatgtggggaaccatctgacataatatacttggactttctttgacaaagtccctcacatgaggctattaaggaagttaggtagtcatggaataagaggcaaaatgctgtcatgaatgagaaactggttacacaacaggaaacaa-gtgca
i GCA_965140235.1.OZ222813.1        I 334 I 12166
s GCA_965140285.1.OZ223564.1          6387635 172 + 135739771 T----ATTTTGTCTACAAAAGAGTGAATATGTGGGGAACCATCTGacataatatacttggactttctttgacaaagtccctcacatgaggctattaaggaagttaggtagtcatggaataagaggcaaaatgctgtcatgaatgagaaattggttacacaacaggaaacaa-gtgca
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    518883 171 -   2470581 a----attttgtcgacaaaagagtgaatatagggggaaccatctgatataatatacttggactttctttgtcaaagtccctcacatgaggctattagggaagttaggtagtcatggaatatgaggcaaaatgttgtcatgaatgagaaactgattacgcaacagaaaacaa-gtgc-
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 1
s GCA_965140295.1.OZ223117.1        128275506 172 - 131075015 t----attttgttgacaAAAGAGTGAATATGTGGGGAACCATCTGacataatatacttggactttctttgacaaagtccctcacatGAGGCTATTAAGGAAGTTAGgtagtcatggaataagaggcaaaatgctgTCATGAATGAGAAACTGGTTACACAACAGGAAACAA-GTGCA
i GCA_965140295.1.OZ223117.1        I 334 I 12134
s GCA_032164245.1.JAVMKO010000006.1  95614803 169 + 106994437 -----ATTTTgtcaacagaagagtgaatatggggggaaccatctg--acaatataattaggtgttctttgacaaagtccctcaaatgaggctattaaggaagttaggtagtcatggaatatgaggcaaaaagctgttatgaatgagaaactgcttacacaacagaaaacaa-gtgcc
i GCA_032164245.1.JAVMKO010000006.1 I 11560 T 11203
s GCF_007399415.2.NC_044325.1       124975287 172 + 155918640 C----ATTTTGCCGACAAAAGAGTGAATATGGGAGGAACCATCTAACATAATATACTTGGACTTTTTTTGACAAAGTCCTTCACATGAGGCTATTAAGGAAGTTAGGTAGACATAGAATATGAGGCAAAATGCTGTCACAAATGAGAAAATGGTTACGCAACAGAAAACaa-gtgcc
i GCF_007399415.2.NC_044325.1       I 45025 I 176
s GCF_025201925.1.NC_066621.1         3118166 171 + 162938067 c----attttgccgacaaaagagtgaatatgggaggaaccatctgacataatatacttggattttctctgacaaagtccctcacatgaggctattaagaaagttaggtagtcatggaatatgaggcaaaatgctgtcacaaatgagaaattggttacgcaacagaaaacaa-gtg-c
i GCF_025201925.1.NC_066621.1       C 0 I 176
s GCA_045781085.1.CM099110.1          2264332 171 + 145055026 C----ATTTTGCTGACAAAAGAGTGAATATGGGAGGAACCATCTGacataatatacttggactttctTTGACAAAGTATCTCACATGAGGCTATTAAGGAAGTTAGGTTGTCTTGGAATATGAGGCAAAATGCTGTCACAAATGAGAAAATGGTTATGCAAC-GGAAACAA-GTGCC
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3505337 172 + 154637676 c----attttgttgacaaaagagtgaatatgggggtaaccatctgacatagtatacttggactttctttgacaaagcccctcacatgaggctattaaggaagctaggtagtcatggaatatgaggcaaaatgctgccataaatgagaaacaggttacgccacagaaaacaa-aTAcc
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960650 172 - 158421364 c----attttgttgacaaaagagtgactatgggggcaatcatctgacatagtatacttggactttctttgacaaagtccctcacatgaggctattaaggaagtcaggtagtcatggaatatgaggcaaaatgctgtcatgaatgagaaacaggttacgcaacagaaaacaa-gtgcc
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111013577 171 + 311452600 G----ATTGTGTTGACAAAACAGTGAATAT-GGGAGAACCACGTGACATGATATATTTGgactttttttgacaaaattccTCGCATGAGGCTATTAAGGAAGCTGTGTGGTCATGGAATACGAGGCAAAATGCTGTCATGaatgaaaaactggttaagcaacagaaaacaa-aggcc
i GCA_040894355.2.CM105055.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        11228 177 +     31630 CGGgtcgtcaaagatatcgagacacctaacgtcctttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcagtttcaacacagc-aacaggg--aaaaatatgggtcgacacaatgttctgcattaggactggtggtgtttcaaat
s GCA_965152275.1.OZ223944.1        128218203 177 - 132879417 CAGGTCGTcagagatatcgagacacctaacgtcctttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcagtttcaacacagc-aacaggg--aaaaatatgggtcgacacaatgttctgcattaggactggtggtgtttcaaat
i GCA_965152275.1.OZ223944.1        I 720 C 0
s GCA_965152235.1.OZ223887.1          3242745 177 + 134836623 catgtcatcagagacatctagacacctaacgtccgttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcaatttcaacacagc-aacaggg--aaaaatatgggtcgacacaatgttctgcattaggactgGTGGTGTTTCAAAT
i GCA_965152235.1.OZ223887.1        I 172 C 0
s GCF_009764565.3.NC_050073.1       128189691 177 - 131128815 cagatcctcagaaatatctagacacgtaatgtccgttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcaatttcaacacagc-aacaggg--aaaaatatgggtcgacacaatgttccgcattaggacaggtggtgcttcaaat
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1          3525342 177 + 133850159 catgtcatcagagacatctagacacctaacgtccgttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcaatttcaacacagc-aacaggg--aaaaatatgggtcgacacaatgttctgcattaggactggtggtgtttcaaat
i GCA_965140235.1.OZ222813.1        I 172 C 0
s GCA_965140285.1.OZ223564.1          3889292 179 + 135739771 catgtcatcagagacatctagacacctaacgtccgttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcaatttcaacacagc-aacagggAAaaaaatATGGGTCGACACAATGTTCTGCATTAGGACTGGTGGTGTTTCAAAT
i GCA_965140285.1.OZ223564.1        n 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    519055 176 -   2470581 cagatcctcagagatgtctagactcccaacgtccattgatttcagtg-gaagttaggagcctccctacaattgagcatctgggccaaagagt-agaataaagagtcaatttcaacacagc-aacaggt--acaa-tgtgggtcgacacaatgttccgcattaggactggtggtgtttcaaat
i GCA_033349115.1.JAVFKW010000008.1 I 1 C 0
s GCA_965140295.1.OZ223117.1          2582083 176 + 131075015 C--GTCATCAGAGACATCTAGACACCTAACgtccgttgatttcagtg-gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaaaggtcaatttcaacacagc-aacagggA-aaaaaTATGGGTCGACACAATGTTCTGCATTAGGACTGGTGGTGTTTCAAAT
i GCA_965140295.1.OZ223117.1        I 172 C 0
s GCA_032164245.1.JAVMKO010000006.1  95603769 176 + 106994437 cagatcctcagagatgtctagattcctaaaatccattgattttagtg-gaatttaggagcctacctacctttgagcatctgggccaaagagt-agaataaactgtcaatttcaactcagc-aacaggt--acaa-tatgggtcaacacaatctcctgcattaggactggtggtgtttcaaat
i GCA_032164245.1.JAVMKO010000006.1 T 11203 I 55023
s GCF_007399415.2.NC_044325.1         1441915 177 - 155918640 cagatcctcagagatatctagactactaatgtctgttgatttcagtg-gaaattaggagcctacctacctttgagcatctgggccaaagagt-agaataaaccatcaatttcaacacagcAaacagat--aaaa-tatgggttgacacaatgttccgcattaggactggtggtgtttcaaat
i GCF_007399415.2.NC_044325.1       I 171 n 176
s GCF_025201925.1.NC_066621.1       124865894 176 - 162938067 cagatcctcagagatacttagactcctaacgtctgttgatttcagtg-gaagttaggaacttacctacctttgagcatctaggccaaagagt-agaataaaccatcaatttcaacacagc-aacaggt--aaaa-tatgggttgacacaatgttccgcattaggactggtggtgtttcaaat
i GCF_025201925.1.NC_066621.1       I 355 n 176
s GCA_045781085.1.CM099110.1          2264503 175 + 145055026 CAGAT-CTCAGAGATATCTAGACTCCTaatgtccattgatttcagtg-ggggttAGGAGCCTACCTACCTTTGAGCATCTGGGCCAAAGAGT-AGAATAAACCATCAATTTCAACACAGC-AACAGGT--AAAA-TATGGGTTGACACAATGTTCAGCATTAGGACTGGTGGtgtttcaaat
i GCA_045781085.1.CM099110.1        C 0 C 0
s GCF_027887155.1.NC_071508.1         3505509 107 + 154637676 cagatcctcagagatgtctagacccctaacatccgttgatttcaac--gaagttaggagcctacctacctttgagcatctgggccaaagagt-agaataaacag------------------------------------------------------------------------tcaaat
i GCF_027887155.1.NC_071508.1       C 0 C 0
s GCF_028017835.1.NC_088686.1         1960822 107 - 158421364 cagatcctcagagatgtctacacccctaacatccattgatttcaac--gaagctaggagcctaccaacctttgagcatctgggccaaagAGT-AGAATAAACAG------------------------------------------------------------------------TCAAAt
i GCF_028017835.1.NC_088686.1       C 0 C 0
s GCA_040894355.2.CM105055.1        111013748 109 + 311452600 caaatcctcagagctacctagactcctaacgtccattgatttcagt-GgaagttaggagcctaaatacctttgaggatctgggccaaagagtAagaataaacagtccat------------------------------------------------------------------------t
i GCA_040894355.2.CM105055.1        C 0 I 64

a score=0.000000
s GCF_015237465.2.NW_025111247.1        11405 756 +     31630  
s GCA_965152275.1.OZ223944.1        128218380 753 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 I 514
s GCA_965152235.1.OZ223887.1          3242922  24 + 134836623  
i GCA_965152235.1.OZ223887.1        C 0 n 0
s GCF_009764565.3.NC_050073.1       128189868  25 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 I 4863
s GCA_965140235.1.OZ222813.1          3525519  24 + 133850159  
i GCA_965140235.1.OZ222813.1        C 0 n 0
s GCA_965140285.1.OZ223564.1          3889471  24 + 135739771  
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.JAVFKW010000008.1    519231  25 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 60858
s GCA_965140295.1.OZ223117.1          2582259  24 + 131075015  
i GCA_965140295.1.OZ223117.1        C 0 n 0
s GCA_032164245.1.JAVMKO010000006.1   1916720  25 - 106994437  
i GCA_032164245.1.JAVMKO010000006.1 T 12089 I 60988
s GCF_007399415.2.NC_044325.1       124975635  25 + 155918640  
i GCF_007399415.2.NC_044325.1       I 176 N 0
s GCF_025201925.1.NC_066621.1         3118513  25 + 162938067  
i GCF_025201925.1.NC_066621.1       I 176 N 0
s GCA_045781085.1.CM099110.1          2264678  25 + 145055026  
i GCA_045781085.1.CM099110.1        C 0 N 0
s GCF_027887155.1.NC_071508.1         3505616  25 + 154637676  
i GCF_027887155.1.NC_071508.1       C 0 N 0
s GCF_028017835.1.NC_088686.1         1960929  25 - 158421364  
i GCF_028017835.1.NC_088686.1       C 0 N 0
s GCA_040894355.2.CM105055.1        111013921  25 + 311452600  
i GCA_040894355.2.CM105055.1        I 64 N 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        12161 514 +     31630  
s GCA_965152275.1.OZ223944.1          5068312 514 + 132879417  
i GCA_965152275.1.OZ223944.1        I 930 n 514
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        12675 652 +     31630  
s GCA_965152275.1.OZ223944.1        128219647 635 - 132879417  
i GCA_965152275.1.OZ223944.1        I 514 I 1152
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        13327 1150 +     31630  
s GCA_965152275.1.OZ223944.1          4561659 1145 + 132879417  
i GCA_965152275.1.OZ223944.1        n 1152 n 1152
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283    0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495    0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543    0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946    0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        14477 540 +     31630  
s GCA_965152275.1.OZ223944.1        128221434 534 - 132879417  
i GCA_965152275.1.OZ223944.1        I 1152 N 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        15017 140 +     31630 tgggaaagggactagcctgggacccagtccagttcccagatctacccccagaagtgtgtgaccaggagcacagcccttcctctgtgtctcagaccccacctgccagatggggaggatccTTCCTTGCCCAAGGGTGCTAA
s GCA_965152275.1.OZ223944.1          5073685 140 + 132879417 agggaaagggactagcctgggacccagtccagttcccagatctacccccaggagtgtgtgaccaggagcacagcccttcctctgtgtctcagaccccacctgccagatggggagaatccttccttgccccagggtgctaa
i GCA_965152275.1.OZ223944.1        N 0 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        15157 285 +     31630 GGGAGCGGGGGGGGGGGGGGGTTCATTTGTGGATGGGAAGGGTTCAGATACCATGTGTGTGGCTTGGGCCCCAGGTCGGGGATGGTCAGACATTCACTGCGACGGGGTGACATGGGCCAAGGGGAGGTCTGAGCTGTGATGACAGGGGAGGGGCTCCACATCTGGCCACCCCTCCCAGACTGCTAAAGTTACTGAGGATAACCCCTGGCTCTGAGGATGCTCTTATTTCTAGGCCAGCCCCACGGCCCTGACAGCTTGATGCTTCTGAAA-CTGACCTCTGGGCAT
s GCA_965152275.1.OZ223944.1          5073825 274 + 132879417 agg----------tgggggggttcatttgtggatgggaagggttcagataccatgtgtgtggcttgggccccaggtgggggatggtcagacattcactgTGACGGGGTGACATGGGCCACGGGGAGGTCTGAGCTGTGATGACAGGGGAGGGGCTCAACATCTGGCcacccctcccagactgcaaaagttactgaggataacccctggctctgaggatgctctcatttctgggccagccccatggccctgacagcttgatccttccaaaa-ctggcctctgggca-
i GCA_965152275.1.OZ223944.1        C 0 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        15442 692 +     31630  
s GCA_965152275.1.OZ223944.1          5074099 692 + 132879417  
i GCA_965152275.1.OZ223944.1        C 0 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        16134 340 +     31630 ctgttgttaaggtgatgccatggacagtagttctggagaatggggaacttcagcagcctctgctgactgactcctccagttctcccagagcaggtggtggctgggataacatgatactagggccctaggaatcagcctgaggcccagaggggtatgaaactctcacagggggagttggcagcccctagcatgagcaatagcagcgtgtcatgttgatgtgatgcctgttaggaaatacccaatctgggtctgctctgctctgagctgctcaggg-acaagctggcacctatcaatggcacctgcctgggttcatcctctccttgctcccaggtcagtgcat
s GCA_965152275.1.OZ223944.1          5074791 341 + 132879417 ctgttgttaaggtgatgccatggacagtagctctggagaatggggaacttcagcagcctctgctgactgactcctccagttctgccagaggaggtggtggctgggataacatgatactagggccctaggaaccagcctgaggcccggaggggtatgaaactctcacagggggagttggcagcccctagcatgagcaatagcagcgtgtcatgttgatgcgatgcctgttaggaaatagccgagctgggtctgctctgctctgagctgctcagggGacaagctggcacctatcaatggcacctgcctgggttcatcctctccttgctcccaggtcagtgaat
i GCA_965152275.1.OZ223944.1        C 0 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        16474 20 +     31630 ggggatgggatgggatggga
s GCA_965152275.1.OZ223944.1          5075132 20 + 132879417 ggggatgggatgggatggga
i GCA_965152275.1.OZ223944.1        C 0 N 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283  0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495  0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543  0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946  0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        16494 608 +     31630  
s GCA_965152275.1.OZ223944.1        127705897 596 - 132879417  
i GCA_965152275.1.OZ223944.1        N 0 I 2
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        17102 343 +     31630 tgcagtgactcagtccaggaaaggagctcagtgtccctcacccaacgcccagggcagggacaggtcagattctgctccctgactggccatggtgctggaaaaatctcacaccctgtctgtgcttccacaggtgcagggaaaccagtgaggatctggtccagcaattgctggtgtgagcttcccaactcactgagccaagggctcccctctcagacaccagggtgtcagtcagggagacagtgagcagagccagatctct--------------ccattaactcaacccctgatgggatcccttttctgcaacg---------atccatgcaacACACACAAGCCTGGACCGTGAGCAAGGCTCGAA
s GCA_965152275.1.OZ223944.1        127706495 356 - 132879417 tgcagtgactcagcccaggaaaggagctcagtgtccctcacacaacgcccagggcaggggcaggtcaggttctgctccctgactggccatggtgctggaaaaatcccacactctgtctgtgcttccacaggtgcagggaaaccagtgaggatctggtccagcaatcgctggtgtgagcttcccaactcactgagccaagggctcccctctcagagaccagggcgtcagccagggagacagtgagcagagccagacccctGGGGATACAATCCTccattaactcaacccctgatgggatcctttttctgccacg---------atccatgcaacacacacaagcctgcaccattagcaaggctc-ca
i GCA_965152275.1.OZ223944.1        I 2 N 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        17445 411 +     31630 CCCAACCCAGGGTCCTTGGCCTCTTGCAGCTGAACACTGTCATCTGGAAATAACtatccaagaatatcagggttggaagggacgtcaggagttcagctagtccaaccccctgctcaaagcaggaccaatcccctactaaatcatccaatgaatttttgccccaggtccctaaatggccccctcaaggattgaacttataaccctaggtttagcaggc-aatgctcaaaccact-gagctatccttccccctccataacacactcactacagggggagacagctccacacctgagctactgaaatgcaccagcagaga--ccttacctcccccaccctggccacgttcctgtaggccaggcgctcggtgtcttggagcccgtcccgacaccacagatcgctcgctgctctgatgtt
s GCA_965152275.1.OZ223944.1          4565776 410 + 132879417 ----acccagggtcctcggcctcttgcagctgaacactctctgctggaaataagtatcatagaatatcagggttggaagggacctcaggagttcatctagtccaaccccctgctcaaagcaggaccaatccccaactaaatcatccaactgatttttgccccaggtccctaaatggtcccctcaaggactgaactcataaccctaggttgagcaggcCaatgctcaaaccgct-gagctatccctccccttacagaacatactcactgcaggggaagacagctccacacctgagctgctgaaatgcaccggcggagaGTccttacctcccctaccttggccatgttcctgtaggccaggcgctcggtgtcttggagcccatcccgacaccacagatcgctTGCCACTCTGATGTT
i GCA_965152275.1.OZ223944.1        N 0 I 1401
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        17856 494 +     31630  
s GCA_965152275.1.OZ223944.1        128224835 522 - 132879417  
i GCA_965152275.1.OZ223944.1        n 1401 n 1401
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        18350 231 +     31630 ccctgaattagggagatgagtgtgagtcatcatctaagctggggtcagtctcagaggaggaggcttctttctgtagggtcccttggccagtaagtggagggcccaaaacaggggccttctttccattggggtccctctgccctgctgcagttggtctaagagaagaggccttagttctattggtgtcccaatggccagctggagctagtttccaag----ggactcacttctacg
s GCA_965152275.1.OZ223944.1        127707780 230 - 132879417 -cctgaatttgggagatgagtgtgagtcatcatctaagctggggtcagtctcagaggagggggcttctttctgtaaggtcccttggccagcaagttgggggcccaaaacaggggccttctttccattggggtccctctgccctgctgcagttggtctaagagaagaggccttagttctactggtgtcccaatggccagctggagctactctccaag----ggactcacttctacg
i GCA_965152275.1.OZ223944.1        n 1401 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        18581 651 +     31630  
s GCA_965152275.1.OZ223944.1        127708010 651 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 n 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        19232 302 +     31630 ggggagagtcagcgggcaggcgtacgtgctctacaaacgagcctctcccactccacacggggctgagacctcgtcctcagggtggaatatctaactcctcatgtgggggttcatgacactgcccacgtcttgctgggcacaagctgtcagtttccctccagcctgggacaaagctcagccttggggctggtctatttgctctgaacccctgatccatgaaaagcacatcaggatcaaggcacatgccctgggcccccagaccccagctccagagtccttcataggacggatggatgggccgt
s GCA_965152275.1.OZ223944.1          4567587 302 + 132879417 ggagagggttagcgggcaggcgtacatgctctacaaatgagcctctcccactccacacggggctgagacctcgtcctcagggtggaatatctgactcctcatgtgggggttcatgacactgcccacgtcttgctgggcacaagctgtcagtgtctctccagcctgggacaaagctcggccttggggctggtctatttgctctgaacccctgatccatgaccagcccatcaggatcaaggcacatgccctggtcccccagaccccagctccagaggccttggtaggatggatggaggggccgt
i GCA_965152275.1.OZ223944.1        I 1401 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        19534 922 +     31630  
s GCA_965152275.1.OZ223944.1          4567889 925 + 132879417  
i GCA_965152275.1.OZ223944.1        C 0 I 883
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        20456 316 +     31630 aaccccaccctgaccggccctgatcccagctctgctcacctctcccctattctcagcagctccatcaaactgagggagcagggaccagaggccactcctgcttcggggacagagaagtaggctcatgacctacccgaaagtgggtggtgtcctgcccagtgcccatggtgaagatggtgtagagtagagcccgcaggaggcgtgactccagctccaggagaagtggcagcttcagtttgctggcgggagagaggagcccgtgttatgcttggcagcacccgag------tggcactggcactgccatgcacatgaccctcct
s GCA_965152275.1.OZ223944.1        128227411 316 - 132879417 agccccaccctgcccgggcctgttcccagctctgctcacctctcccctattctcagcagctccatcaaaccaagggagcagggaccagaggccactcctgctccggggacagagaagtaggattatgacctacccggaagtgggtggtgtcctgcccagtgcccatggtgaagatggtgtagagtagagcccgcaggaggcgtgactccagctccagggcaagtggcggcttcagtttgctggcgggagagaggagccagtgttatgcttggcagcacccgaa------tggcactggcactgccatgcacatgaccctgct
i GCA_965152275.1.OZ223944.1        n 883 n 883
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        20772 332 +     31630 ccctgcagtgatcccctccctgtggccactgtaacgttacgggagtgaaatcaccccccagccaggaaagaggggatgttcccacctcctctgctgggggatgcaaacagccatggctgggggtaatctaagctggagaggatctggggctaccggctctggacctgatcagcaccagggttagggaagctggatgggagggtcctggtacctgaggctgcaaaccgcggccatggagctggagacgatggagctcggctcagactccatgggcagattttcaatcagctcctgacaga-ccccaagaagataaaatcccatgtgagactcag
s GCA_965152275.1.OZ223944.1        127710207 306 - 132879417 ccctgcagtgatcccctccctgtggccactgtaacgttacgggagtgaaatcaccccccagccaggaaagaggggatgttcccacctcctctgttgggggatgcaaacagccatggctgggagtaatctaggccggagaggatca--------------------------gcaccagggttagggaagctggatgggagggtcctggtacctgaggctgcaaaccgcggccatggagctggagaggatggagctcagcaaagactccctgggcagattttcaatcagcttctgagaga-ccccaaggagataaaatcccatgtgagattcag
i GCA_965152275.1.OZ223944.1        n 883 I 4
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        21104 268 +     31630 cgcagaccctcaggcgcttccccgggaggaggccatagtgctctgcagaaacagccagtgacacccccaccggcaaccagctgtgcccctcattcctctcatccatcaaacttactccttccttccccctctcccacccaattcctccctcccctcagcctcagctgtccctctggccttacaattcccccactgccagctccccatcagtgtcagagtcagaatttcccccttccctgctccccagccctcagtctcaggaacccct
s GCA_965152275.1.OZ223944.1        127710517 254 - 132879417 tgcagaccctcaggcgcttcccagggaggaggccaaagtgctctgcagaaacagccagtgtcaccc-------caaacagctaggccccccattcctcccatccatcaaacttactccttccttccccctctcccacccaattcctccctcccctcagcctcagctgtccctctggcctttcaatttcctgaatgccagctccccatcagtgtcagaa-------tttccccttccctgttcccctgccctcatccccaggaacccct
i GCA_965152275.1.OZ223944.1        I 4 I 2769
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        21372 1217 +     31630  
s GCA_965152275.1.OZ223944.1          4569697 1246 + 132879417  
i GCA_965152275.1.OZ223944.1        I 883 n 2769
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283    0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495    0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543    0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946    0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        22589 415 +     31630 ctgggcatgggggcgcagctcctgacttctctgcttcctgtaaaggaagccgcagagctgccttgcccagatcccgcccgctcctgtgtccttcccgcagagcatcaccctgggccacctccatttgggaccagaaggtgcctcagggtatggtaaggaagctggtgtcttcctcctcctccagaaagccagggagctcctcctccttgcctggccattggcttcttccctgcccgtggggacagaggggccgctctcctcctaggcaagccggccgctgctcccttccgccttcagagccaccagcccggcctttctcctcagcatccccttcagccgctgcatcctgggactgagtgaggaggagccatgagtctgggctcaaggcagccgctcattaacatgcctgcctgca
s GCA_965152275.1.OZ223944.1          5081162 415 + 132879417 ctgggcactggggcgcagctcctggctcctctgcttcctgtgaaggaagctgcagagccgccatgcccagctcccgcctgctcctgggtccctcccacagagcatcaccctgggccacttccatttgggaccagaaggtgcctcagggtatgctaagggagctggtgccttcctcctcctccacaaggccagggagctcctcctcctcgcctggccactggcttcttccctgcccgcggggacagaggggccgctctcctcctgggcaagccggccgctgctccctaccagctccagagccacctgcccggccttcctcctcagcatctgcttcagccgctgcatcctgggactgagtggggagcagccatgagtctgggctcaaggcagtcgctcattgacgtgcctgcctgca
i GCA_965152275.1.OZ223944.1        n 2769 C 0
e GCA_032164245.1.JAVMKO010000006.1   1916745 60988 - 106994437 I
e GCA_965140295.1.OZ223117.1          2582283   0 + 131075015 I
e GCA_033349115.1.JAVFKW010000008.1    519256 60858 -   2470581 I
e GCA_965140285.1.OZ223564.1          3889495   0 + 135739771 I
e GCA_965140235.1.OZ222813.1          3525543   0 + 133850159 I
e GCF_009764565.3.NC_050073.1       128189893 4863 - 131128815 I
e GCA_965152235.1.OZ223887.1          3242946   0 + 134836623 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        23004 526 +     31630  
s GCA_965152275.1.OZ223944.1          5081577 526 + 132879417  
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1        120617776 101 - 134836623  
i GCA_965152235.1.OZ223887.1        I 12193 C 0
s GCF_009764565.3.NC_050073.1       128194756  36 - 131128815  
i GCF_009764565.3.NC_050073.1       I 4863 C 0
s GCA_965140235.1.OZ222813.1        130138581 101 - 133850159  
i GCA_965140235.1.OZ222813.1        I 12166 C 0
s GCA_965140285.1.OZ223564.1          6399989 101 + 135739771  
i GCA_965140285.1.OZ223564.1        n 0 I 34
s GCA_033349115.1.CM065755.1           366463  29 - 113643910  
i GCA_033349115.1.CM065755.1        n 60858 C 0
s GCA_965140295.1.OZ223117.1        128287812 101 - 131075015  
i GCA_965140295.1.OZ223117.1        I 12134 C 0
s GCA_032164245.1.JAVMKO010000005.1  42749317  29 - 108345705  
i GCA_032164245.1.JAVMKO010000005.1 n 60988 C 0
s GCF_007399415.2.NC_044325.1       154304544  40 + 155918640  
i GCF_007399415.2.NC_044325.1       N 0 C 0
s GCF_025201925.1.NC_066621.1       159732784  40 - 162938067  
i GCF_025201925.1.NC_066621.1       N 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        23530 34 +     31630 ctga-----tgcttagtctcttgccctcctcctcggtct
s GCA_965152275.1.OZ223944.1          5082103 34 + 132879417 ctga-----tgcttagtctcttgccctcctcctcgatct
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1        120617877 34 - 134836623 ccga-----tgcttagtctcttgccctcctcctcgatct
i GCA_965152235.1.OZ223887.1        C 0 N 0
s GCF_009764565.3.NC_050073.1       128194792 34 - 131128815 ccga-----tgcttagtctcttgtcctcctcctcgatct
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130138682 34 - 133850159 ccga-----tgcttagtctcttgccctcctcctcgatct
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131496156 34 - 135739771 ccga-----tgcctagtctcttgccctcctcctcgatct
i GCA_965140285.1.OZ223564.1        I 12785 I 389
s GCA_033349115.1.CM065755.1           366492 33 - 113643910 cctaAAAACtgttaaaaa------tctgggcctagatcc
i GCA_033349115.1.CM065755.1        C 0 C 0
s GCA_965140295.1.OZ223117.1        128287913 34 - 131075015 ccga-----tgcttagtctcttgccctcctcctcgatct
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000005.1  42749346 28 - 108345705 ccga-----tgctgagtc------cctcctcctcgatct
i GCA_032164245.1.JAVMKO010000005.1 C 0 C 0
s GCF_007399415.2.NC_044325.1       154304584 31 + 155918640 gggt-----tgctc---ctcccttcaccctcctcgatct
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       159732824 31 - 162938067 gggt-----tgctc---ctcccttcaccctcctcgatct
i GCF_025201925.1.NC_066621.1       C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        23564 344 +     31630 ccggcacacaggtgggctggaaagggtgctgcccaatgccctgccagcagagcagagggtagaagcctg-gagatcaaaagtggctgtgaaaacaagatgatgttttattgccaggggatggatacacccaggctagcaagcggaggttcacatcactgacctacaaccagccgcacacctcccatctccaagtctcctcatacctcacgcacattcctgaagcgtgatgacccatttgctgtagtggagtgtccctagccccactgatgaaaacagaggccttgtcaggagaagctactgcctcagggtcgcactgggagtcagggatagagccggggatggag
s GCA_965152275.1.OZ223944.1          5082137 336 + 132879417 cccacacccaggtgggctggaaagggtgctgcccaatgccctgccagcagagcagggggtagaagcctg-cagatcgaaagtggctgtgaaaacaagatgatgttttattgccaggggatgaatacacccaggctagcaagtgggggttcacaacactgaccaatggccagccgcacacctccca--------tctcctcatacctcacgcacattcctgaagcgtgacgacccaagggctgtaggggagtgtccccagccccactgatggaaacagaggcctgggcaggagaagccactgcctcagggtcgcactgggagtcagggatagagccggggatggag
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          5543922 344 + 134836623 cccacatccaggtgggctggaaagggtgctgtccaatgccctgccagcagagcagggggtagaagcctg-gagatcaaaagtggctgtgaaaacaagatgatgttttattgccaggggatgtatacacccaggctagcaagccggggttcacaacactgacctacagccagcagcacacctcccatctccaggtctcctcatacctcaagcacattcctgaagcgtgatgacccaagggctgtaggggagtgtccccagccccagtgagggaaacagaggcctgggcaggagaagccactgcctcagggtcgttgagggagtcagggatagagacggggatggag
i GCA_965152235.1.OZ223887.1        N 0 I 307
s GCF_009764565.3.NC_050073.1       128194826 343 - 131128815 cccacacccaggtgggctggaaagggtgctgcccaatgccctgccagcagagcaaggggtagaagcctg-gacattgaaaatggctgtgaaaagaagatgatgttttattgccaggggatggataaactcagcctagcaaccaggagttcacaacactgacctacg-ccagcagcacacttcccatctccagctctcctcgtacctcacgtacattcctgaagcgtgacgacccacgggctgtaggggagtgtccccagccccactgatggaatcagaggcctgggcaagagaagccactgcctcagggtcgcattgggagtcagggatagagccggggatggag
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130138716 344 - 133850159 cccacatccaggtgggctggaaagggtgctgtccaatgccctgccagcagagcagggggtataagcctg-gagatcaaaagtggctgtgaaaacaagatgatgttttattgccaggggatggatacacccaggctagcaagccggggttcacaacactgacctacaaccagccgcacacctcccatctccaggtctcctcatacctcatgcacattcctgaagcgtgacgacccaagggctatagaggagtgtctccagccccactgatggaaacaaaggtcttgtcaggagaagccactgcctcagggacgcaaacagagtcagggatggagccggggatggag
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6400124 344 + 135739771 cctgcacccaggtgggctggaaaggatgctgcccaatgccctggcagcagagcagggggtataagcctg-gagatcaaaagtggctgtgaaaacaagatgatgttttattgccaggggatgtatacacccaggctagcaagccggggttcacaacactgacctacaaccagccgcacacctcccatctccaggtctcctcatacctcatgcacattcctgaagcgtgacgacccaagggctatagaggagtgtctccagccccactgatggaaacaaaggtcttgtcaggagaagccactgcctcagggtcgcaaacagagtcagggatggagccggggatggag
i GCA_965140285.1.OZ223564.1        I 34 C 0
s GCA_033349115.1.CM065755.1           366525  65 - 113643910 taatttcaaaagtggtttaata-----------------------------ttt-----tagaagcctgTctcattgaaagtaactttgaaaatgtgac------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_033349115.1.CM065755.1        C 0 C 0
s GCA_965140295.1.OZ223117.1        128287947 344 - 131075015 cccacatccaggtgggctggaaagggtgctgtccaatgccctgccagcagagcagggggtataagcctg-gagatcaaaagtggctgtgaaaacaagatgatgttttattgccaggggatggatacacccaggctagcaagccggggttcacaacactgacctacaaccagccgcacacctcccatctccaggtctcctcatacctcatgcacattcctgaagcgtgacgacccaagggctatagaggagtgtctccagccccactgatggaaacaaaggtcttgtcaggagaagccactgcctcagggtcgcaaacagagtcagggatggagccggggatggag
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000005.1  42749374  73 - 108345705 ccagcacccaggtggaatgtaa-----------------------------gtcaaaagtggaagccgg-gagatggaaaatggctgtgaaaacaagacgatg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_032164245.1.JAVMKO010000005.1 C 0 I 748
s GCF_007399415.2.NC_044325.1       154304615 101 + 155918640 cctgcacccaggtggcctgcaacgggtgccgcacaaagccctgccagcagggcaaggggtagaaacc-a-gagaccgaaactggctgtgaaaacaatacaatg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       159732855 101 - 162938067 cctgcacccaggtggcctgcaacgggtgctgcagaatgccctgccagcagggcaaagggtagaaacc-a-gagacCAAAACTGGCTGTGAAAACAATACAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCF_025201925.1.NC_066621.1       C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        23908 54 +     31630 cccaggagt---------cctttgtccaggctcctacactaaccacgagaggaacactccctt
s GCA_965152275.1.OZ223944.1          5082473 54 + 132879417 cccaggagt---------cctttgtccaggctcccgcactaaccacgagaggaacactccctt
i GCA_965152275.1.OZ223944.1        C 0 n 0
s GCA_965152235.1.OZ223887.1        131423409 45 - 134836623 cc------------------tttgtccaggctcttgcactaaccactagaggaacactccctt
i GCA_965152235.1.OZ223887.1        n 307 n 307
s GCF_009764565.3.NC_050073.1       128195169 54 - 131128815 cc-------CTGGAGTCC--tttgtccaggctcccacactaaccactagaggaaccctccctt
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130139060 45 - 133850159 cc------------------tttgtccaggctctcgcactaaccactagaggaacactccctt
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6400468 45 + 135739771 cc------------------tttgtccaggctctcgcactaaccactagaggaacactccctt
i GCA_965140285.1.OZ223564.1        C 0 I 261
s GCA_033349115.1.CM065755.1           366590  1 - 113643910 -------------------------------------------t-------------------
i GCA_033349115.1.CM065755.1        C 0 I 42
s GCA_965140295.1.OZ223117.1        128288291 45 - 131075015 cc------------------tttgtccaggctctcgcactaaccactagaggaacactccctt
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000006.1  95658968 16 + 106994437 --------------------------------------------ccgaaacaaaccctcc---
i GCA_032164245.1.JAVMKO010000006.1 I 55023 I 4091
s GCF_007399415.2.NC_044325.1       154304716 21 + 155918640 ------------------------------------------ccactagctgaacgctcctgg
i GCF_007399415.2.NC_044325.1       C 0 I 100
s GCF_025201925.1.NC_066621.1       159732956 21 - 162938067 ------------------------------------------CCAATAGCTGAACGCTCCTGG
i GCF_025201925.1.NC_066621.1       C 0 I 100

a score=0.000000
s GCF_015237465.2.NW_025111247.1        23962 58 +     31630 ccagcgctgggacgtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
s GCA_965152275.1.OZ223944.1          4572300 58 + 132879417 ccagagctgggaagtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
i GCA_965152275.1.OZ223944.1        n 0 n 0
s GCA_965152235.1.OZ223887.1        120618300 58 - 134836623 ccagagctgggaagtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
i GCA_965152235.1.OZ223887.1        n 307 I 97
s GCF_009764565.3.NC_050073.1       128195223 58 - 131128815 ccagctctgggacatgccagcaggactcgattcccag-----------------tctccctggctctgagtgtga
i GCF_009764565.3.NC_050073.1       C 0 I 98
s GCA_965140235.1.OZ222813.1        130139105 58 - 133850159 ccagagctgggaagtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
i GCA_965140235.1.OZ222813.1        C 0 I 97
s GCA_965140285.1.OZ223564.1        131496579 58 - 135739771 ccagagctgggaagtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
i GCA_965140285.1.OZ223564.1        I 389 I 97
s GCA_033349115.1.CM065755.1           366633  3 - 113643910 --------------------------------------------------------TTT----------------
i GCA_033349115.1.CM065755.1        I 42 C 0
s GCA_965140295.1.OZ223117.1        128288336 58 - 131075015 ccagagctgggaagtgccagcgggactcgattcccag-----------------tctccctggctctgagtgtga
i GCA_965140295.1.OZ223117.1        C 0 I 97
s GCA_032164245.1.JAVMKO010000013.1  29723506 25 +  36900886 cccggggtaggccgccccaa----------------------------------tctct----------------
i GCA_032164245.1.JAVMKO010000013.1 n 4091 I 101
s GCF_007399415.2.NC_044325.1       154304837 58 + 155918640 ccagagctgggaagtgccag-----------------CAGGACTCGATTCCCAGtctccctcgctctgattgtga
i GCF_007399415.2.NC_044325.1       I 100 I 2779
s GCF_025201925.1.NC_066621.1       159733077 58 - 162938067 ccagagctgggaagtgccag-----------------CAGGACTCGATTCCCAGtctccctggctccaattgtga
i GCF_025201925.1.NC_066621.1       I 100 I 2775

a score=0.000000
s GCF_015237465.2.NW_025111247.1        24020 107 +     31630 cctatggaggaggtggaatcttcatccttagagatttgtaaggcccagcttgac-a---------aaaaaaaa-tcctcgcttttaaattaagggagaaatttatgacaatctcttaa
s GCA_965152275.1.OZ223944.1        127713540 106 - 132879417 cctgtggaggtggtggaatcttcatccttagagatttgtaaggcccagcttgac-----------gaaaaaaa-tcatctattttaaattaagggagaaatttatgagaatctcttaa
i GCA_965152275.1.OZ223944.1        I 2769 N 0
s GCA_965152235.1.OZ223887.1        120618455 108 - 134836623 cctatggaggtggtggaatcttcatccttagagatttgtaaggcccagcttgacAa---------aaaaaaaaAtcatctattttaaattaagggagaaatttatgagaatctctta-
i GCA_965152235.1.OZ223887.1        I 97 I 915
s GCF_009764565.3.NC_050073.1       128195379 106 - 131128815 ctgatggagggggtggagtcttcatccttagagatttgtaagacccagcttgac-a---------aaAAAAAA-TCATCTATTTTAAATTAAGGGCGAAATTTATGACAATCTCTTA-
i GCF_009764565.3.NC_050073.1       I 98 C 0
s GCA_965140235.1.OZ222813.1        130139260 116 - 133850159 cctatggaggtggtggaatcttcatccttagagatttgtaaggcccagcttgac-aCACACACACacaaaaaaAtcatctattttaaattaagggagaaatttatgagaatctctta-
i GCA_965140235.1.OZ222813.1        I 97 C 0
s GCA_965140285.1.OZ223564.1        131496734 115 - 135739771 cctatggaggtggtggaatcttcatccttagagatttgtaaggcccagcttgac-aCACACACACa-aaaaaaAtcatctattttaaattaagggagaaatttatgagaatctctta-
i GCA_965140285.1.OZ223564.1        I 97 I 385
s GCA_965140295.1.OZ223117.1        128288491 114 - 131075015 cctatggaggtggtggaatcttcatccttagagatttgtaaggcccagcttgac-aCACACACA-a-aaaaaaAtcatctattttaaattaagggagaaatttatgagaatctctta-
i GCA_965140295.1.OZ223117.1        I 97 C 0
s GCF_007399415.2.NC_044325.1       154307674  28 + 155918640 -----------------------------------------------------------------------------------------taagggccaaatttatgacaatctttga-
i GCF_007399415.2.NC_044325.1       I 2779 C 0
s GCF_025201925.1.NC_066621.1       159735910  28 - 162938067 -----------------------------------------------------------------------------------------taagggccaagtttatgacaatctttga-
i GCF_025201925.1.NC_066621.1       I 2775 C 0
s GCF_027887155.1.NC_071529.1        12368284  55 -  17025087 --------aaacgtgaaattgacaacctttga------taagggcaaaatttat-g---------acaa----------tcttttaaat-----------------------------
i GCF_027887155.1.NC_071529.1       N 0 I 4664
s GCF_028017835.1.NC_088686.1       156127612  55 + 158421364 --------aaatgtgaaattgacaacctttga------taagggcaaaatttat-g---------acaa----------tcttttaaat-----------------------------
i GCF_028017835.1.NC_088686.1       N 0 I 6630
e GCA_032164245.1.JAVMKO010000013.1  29723531 101 +  36900886 I
e GCA_033349115.1.CM065755.1           366636   0 - 113643910 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        24127 8 +     31630 tgttattt
s GCA_965152275.1.OZ223944.1          5082677 8 + 132879417 tgttattt
i GCA_965152275.1.OZ223944.1        N 0 C 0
s GCA_965152235.1.OZ223887.1          5544573 7 + 134836623 -gataatt
i GCA_965152235.1.OZ223887.1        I 307 C 0
s GCF_009764565.3.NC_050073.1       128195485 7 - 131128815 -AATAATT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130139376 7 - 133850159 -gataatt
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6400774 7 + 135739771 -gataatt
i GCA_965140285.1.OZ223564.1        I 261 C 0
s GCA_965140295.1.OZ223117.1        128288605 7 - 131075015 -gataatt
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       154307702 7 + 155918640 -aataatt
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       159735938 7 - 162938067 -aataatt
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCF_027887155.1.NC_071506.1       277626546 7 + 287939129 -aataatt
i GCF_027887155.1.NC_071506.1       n 4664 C 0
s GCF_028017835.1.NC_088684.1       289438176 7 + 300499247 -aataatt
i GCF_028017835.1.NC_088684.1       n 6630 C 0
e GCA_032164245.1.JAVMKO010000013.1  29723531 101 +  36900886 I
e GCA_033349115.1.CM065755.1           366636 0 - 113643910 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        24135 359 +     31630 tttcctcttctttttaaattat-----------------ttaattggaacatgttcactgccatgttt-t-tgagaaagtcacaccagtgacgtgatagctaaggccctggcagcaaagttagctgaaacgctaacccagctttggacagcagtagcttccttggaaggtgcag-----------tttatttcagtttattcaaagagttcagttcagt-gagtagttcgttgaaattcaagaat------aagagttcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaactacgtgtgag----------gggatggatctactggttcataaatctagaaacatgtggagaccaggacttatcatttcagttcactaaccacacttcaa
s GCA_965152275.1.OZ223944.1          5082685 359 + 132879417 tttcctcttctttttaaattat-----------------ttaattggaacatgttcactgccaagttt-t-tgagagagtcacaccactgacgtgatagctaaggccctgacagcaaagttagctgaaacgctaacccagctttggacagcagtagcttccttggaaggtgcag-----------tttatttcagtttattcaaagagttcagttcaat-gactagtttgttgaaattcaaaaaa------gggagttcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaattatgtgtgag----------gggatggatctactggttcataaatctagaaacatgtggagaccagaacgtatcatttcagttcactaaccacacttcaa
i GCA_965152275.1.OZ223944.1        C 0 N 0
s GCA_965152235.1.OZ223887.1          5544580 378 + 134836623 t---------------aaataaAAGAGGAAAAAATAACAtgaagtggaacatgttcactgccaagttt-t-aaagacagtcacaccactgacatgatagctaaggccctggaagcaaagttagctgaaacactaacccagctttggacagcaatagcttccttggaaggtgcagAAAATATTGTCttcctttcagtttattcaaagagttcagttcaat-ggctagttcattgaaattcaagaaaGCCATTgggagttcacaaaacaggcaaacttcttttcctccctcaatctat---ggataaaaactaggtgccag----------gggatggatctacgagttcctaaatctagaatcatgtggagaccagaacgtatcatttcaattcactaaccacccttcaa
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128195492 378 - 131128815 T---------------AAATAGAAGAGGAAAAAATAACATGaagtggaacatgttcactgccaagttt-t-tgagagagtcacaccactgacatgatagctatggccctggaagcaaagttagctgaaatgctaacccaactttggtcagcaatagctttcttgaaaggtgcagAAAATATTGTCttcctttcagtttattcaaagagttcagttgaat-gactagttcattgaaattcaagaaaGCCATTgggagttcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaactaggtgtgag----------aggagggatctactggttcataaatctagaaacatgtggagaccagaacgtatcatttcagttcactaacctcacttcaa
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130139383 378 - 133850159 t---------------aaataaAAGAGGAAAAAATAACAtgaagtggaacatgttcactgccaagttt-t-agagacagtcacaccactgacatgatagctaaggccctggaagcaaagttagctgaaacactaacccagctttggacagcaatagcttccttggaaggtgcagAAACTATTGTCttcctttcagtttattcaaagagttcagttcaat-ggctagttcattgaaattcaagaaaGCCATTgggagttcacaaaacaggcaaacttcttttcctccctcaatctat---ggataaaaactaggtgccag----------gggatggatctacgagttcctaaatctagaatcatgtggagaccagaacgtatcatttcaattcactaaccacccttcaa
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6400781 378 + 135739771 t---------------aaataaAAGAGGAAAAAATAACAtgaagtggaacatgttcactgccaagttt-t-aaagacagtcacaccactgacatgatagctaaggccctggaagcaaagttagctgaaacactaacccagctttggacagcaatagcttccttggaaggtgcagAAAATATTGTCttcctttcagtttattcaaagagttcagttcaat-ggctagttcattgaaattcaagaaaGCCATTgggagttcacaaaacaggcaaacttcttttcctccctcaatctat---ggataaaaactaggtgccag----------gggatggatctacgagttcctaaatctagaatcatgtggagaccagaacgtatcattttaattcactaaccacccttcaa
i GCA_965140285.1.OZ223564.1        C 0 I 57096
s GCA_033349115.1.CM065755.1           366636 109 - 113643910 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCGATGTAACAGAGGGTATTTGCAGCATAGCCAGAAGTGGGCCTCGACTTTCTGAATCTGAAGATAC-----CACCATAACCAATCACTGGACCATCCTTCCTGCCCTTAAA
i GCA_033349115.1.CM065755.1        C 0 I 220
s GCA_965140295.1.OZ223117.1        128288612 378 - 131075015 t---------------aaataaAAGAGGAAAAAATAACAtgaagtggaacatgttcactgccaagttt-t-aaagacagtcacaccactgacatgatagctaaggccctgcaagcaaagttagctgaaacactaacccagctttggacagcaatagcttccttggaaggtgcagAAACTATTGTCttcctttcagtttattcaaagagttcagttcaat-ggctggttcattgaaagtcaagaaaGCCATTgggagttcacaaaacaggcaaacttcttttcctccctcaatctat---ggataaaaactaggtgccag----------gggatggatctacgagttcctaaatctagaatcatgtggagaccagaacgtatcatttcaattcactaaccacccttcaa
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000005.1  42750195 101 - 108345705 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t---ggagtaaaactaggtgtgag----------gggatggatctgctggttcataagtttagaaacacgtggagacccgaacgtatcatttcacttcactaaccacacagcaa
i GCA_032164245.1.JAVMKO010000005.1 I 748 I 3433
s GCF_007399415.2.NC_044325.1       154307709 372 + 155918640 t---------------aaatagGAAGAGAAAAAATAACAttcaatagaacatgttcactgccaagtttTa-c-agacagtcacaccactgatgtgatagctaaggccctggaagcaaagttagctgaaatgctaacccagctttgggcagcagtagcttccttgcaaggggccaAAAATATTGTCtgcctttcagtttattcaaattgttcggttcaatCgactagtttgttgaaattcaagaaaGCCATTgggaattcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaactagg-----------------ggatagatctactgattcatcaatctagaaacatgtggagataagaatgtatcatttcagttcactaaccacatatcaa
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCF_025201925.1.NC_066621.1       159735945 371 - 162938067 t---------------aaatagGAAGAGAAAAAATAACAttcaatagaacatgttcactgccaagttt-a-c-agacagtcacaccactgaggtgatagctaaggccctggagacaaagttagctgaaatgctaacccagctttgggcagcagtagcttccttgcaaggggccgAAAATATTGTCtgcctttcagtttattcaaattgttcggttcaatCgactagtttgttgaaattcaagaaaGCCATTgggaattcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaactagg-----------------ggatagatctactggctcatcagtctagaaacacgtggagacaagaatggatcatttcagttcactaaccacatatcaa
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCF_027887155.1.NC_071506.1       277626553 378 + 287939129 g---------------aaatagAAGA-GAAAAAATAACAttaagtggaatatgttcactgccaagttt-cTc-agacagtctcaccactgatgtgatagctaaggccctggaagcaaagttagctgaaatgctaattcaactttggacagcaggagcttccttgaaaggtgcagAAAATATAGTTttcatttcagtttattcaaacagttcagttcaatCgaccagtttgttgaaattcaagaaaGCCATTgggaattcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaatctaggtgtgag----------gggatagatctactggttcatcaatctagaaacacgtggatacaagaatgtatcatttcagttcactaaccacacatcaa
i GCF_027887155.1.NC_071506.1       C 0 C 0
s GCF_028017835.1.NC_088684.1       289438183 378 + 300499247 t---------------aaatagAAGA-GAAAAAATAACAttaagtggaatatgttcactgccaagttt-tTc-agacagtcgcaccactgatgtgctagttaaggccctggaagcaaagttagctgaaatgctaattcaactttggacagcaggagcttccttgaaaggtgcagAAAATATTGTTttcatttcagtttatacaaatagttcagttcaatCaaccagtttgttgaaattcaagaaaGCCATTgggaattcacaaaacaggcaaacttgttttcctccctcaatctat---ggataaaaactaggtgtgag----------gggatagatctactggttcatcaatctagaaacacgtggagacaagaatgtatcatttcagttcactaaccacacatcaa
i GCF_028017835.1.NC_088684.1       C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        24494 531 +     31630  
s GCA_965152275.1.OZ223944.1        128231406 530 - 132879417  
i GCA_965152275.1.OZ223944.1        N 0 C 0
s GCA_965152235.1.OZ223887.1          5544958 530 + 134836623  
i GCA_965152235.1.OZ223887.1        C 0 I 1685
s GCF_009764565.3.NC_050073.1       128195870 508 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130139761 529 - 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131497234 529 - 135739771  
i GCA_965140285.1.OZ223564.1        I 385 I 485
s GCA_033349115.1.CM065755.1           366965  50 - 113643910  
i GCA_033349115.1.CM065755.1        I 220 I 5287
s GCA_965140295.1.OZ223117.1        128288990 529 - 131075015  
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCA_032164245.1.JAVMKO010000013.1  29723632 509 +  36900886  
i GCA_032164245.1.JAVMKO010000013.1 I 101 n 3433
s GCF_007399415.2.NC_044325.1       154308081 510 + 155918640  
i GCF_007399415.2.NC_044325.1       C 0 I 6303
s GCF_025201925.1.NC_066621.1       159736316 512 - 162938067  
i GCF_025201925.1.NC_066621.1       C 0 I 5923
s GCF_027887155.1.NC_071506.1       277626931 508 + 287939129  
i GCF_027887155.1.NC_071506.1       C 0 I 3215
s GCF_028017835.1.NC_088684.1       289438561 511 + 300499247  
i GCF_028017835.1.NC_088684.1       C 0 I 9432

a score=0.000000
s GCF_015237465.2.NW_025111247.1        25025 484 +     31630 ttttgaattattttcctaatgaaagattgattctcataaaattcgtagagctggcagatgacagaacaaggagcaatgatctcaagttgcagtgtggaaggcttggatattaggaaaaactttttcactgggagggtggggatgcctttgaatctgataggatagagtcccccatcttctacttagagcctatatgttttcttaccttctacacagatgatgatttctttccacaaaatcaacacagtaatgaaaaaaatcccagagaatctcctccacaccaaccgtctctt-gtcctcaccgagagaccgcgagatggaggcttgctgcaggaaggctacaggggtctctgaggttccccctgccccgcatccctgtcctgccgggctgttgtcaagggagctctgtggggtcacacccgcctcatcatctttgcccaataggctgagttcctgcc----aaaggcc-ttt-gtgaagtcacagccaca
s GCA_965152275.1.OZ223944.1        128231936 485 - 132879417 ttttgaattattttcctaatgaaagattgattctcataaaattcgtagagctggcagacgacagaacaaggagcaatgatctcacgttgcagtgtggaagacttggatattaggaaaacctttttcactgggagggtggggatgcctttgaatctgctaggatagagtcccccatcttttacttagagcctatattttttcttaccttcttcacagatgatgatttctttccacaaaatcaacacagtaatgaaaacaatcccagagaatctcctccacaccaaccgtctcttGgtcctcaccgagagaccgcgagatggaggcttgctgcaggcaggctacaggggtctccgaggttccctctgccccgcatccctgtcctgccgggctgttgtcaagggagctctgtggggtcacacccacctcatcatctttgcccaataggctgagttcctgcc----aaaggcc-ttt-gtgaagtcactgccaca
i GCA_965152275.1.OZ223944.1        C 0 I 1193
s GCA_965152235.1.OZ223887.1        120619478 485 - 134836623 ttttgaattattttcctaatgaaagattgattctcatgaaattcgtagagctggcagatgacagaacagggagcaatgatctcaagttgcagtgtagaaggcttggatactaggaaaaacctTTTTACTTGGAGGATGGTGATGCCTTTGAATTTGagaggatagagtcccccatcttctacttagagcctatcttttttcttaccttctatacagatgacgatttctttccacacaatcaacacagtaatgaaaacaatcccagagaatctcctccacaccaaccgtctcttCgtcctcaccgagagaccgcgagatggaggcttgctgcagcaaggctacaggggtctctgaggttccccctgcccctcatcactgtcctgcctggctgttgtcaagggagctctgtggggtcacacccgcctcatcatctttgcccaataggctgagttcctgcc----aaaggcc-ttt-gtgaagtcactgccaca
i GCA_965152235.1.OZ223887.1        I 915 n 1685
s GCA_965140235.1.OZ222813.1        130140290 484 - 133850159 ttttgaattattttcctaatgaaagattgatgctcatgaaattcgtagagctggcagatgacagaacagggagcaatgatctcaagttgcagtgtagaaggcttggatattaggaaaaa-cttttaacttggaggatggtgatgcctttgaatttgcgaggatagagtcccccatcttctacttagagcctatattttttcttaccttctatacagatgacgatttctttccacacaatcaacacagtaatgaaaacaatcccagagaatctcctccacaccaaccgtctcttGgtcctcaccgagagaccgcgagatggaggcttgctgcagcaaggctacaggggtctccgaggttccccctgccccgcacccctgtcctgccggtctgttgtcaagggagctctgtggggtcacacccgcctcatcatctttgcccaataggctgagttcctgcc----aaaggcc-ttt-gtgaagtcactgccaca
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6458255 485 + 135739771 ttttgaattattttcctaatgaaagtttgattctcatgaaattcgtagagctggcagacgacagaacaaggagcaatgatctcaagttgcagtgtggaaggcttggatattaggaaaaactttttcactgggagggtggggatgcctttgaatctactaggatagggtcccccatcttctacttagagcctatattttttcttaccttctacacagatgatgattgctttccacaaaatcaacacagtaatgaaaaaaatcccggagaatctcctccacaccaaccgtctcttGgtccccactaagagaccgtgagatggaggcttgctgcagcaaggctacaggggtctccgaggttccccctgccccgcacccctgtcctgccgggctgttgtcaagggagctctgtggggtcacacccacctcatcatctttgcccaataggctgagttcc----TGCCaaagccc-ttt-gtgaagtcactgccaca
i GCA_965140285.1.OZ223564.1        I 57096 I 62517
s GCA_965140295.1.OZ223117.1        128289519 485 - 131075015 ttttgaattattttcctaatgaaagattgatgctcatgaaattcgtagagctggcagatgacagaacagggagcaatgatctcaagttgcagtgtagaaggcttggatattaggaaaaacttttttacttggaggatggtgatgcctttgaatttgcgaggatagagtcccccatcttctacttagagcctatattttttcttaccttctacacagatgacgatttctttccacacaatcaacacagtaatgaaaacaatcctggagaaactcctccacaccaaccgtctcttGgtcctcaccgagagaccgcgagatggaggcttgctgcagcaaggctacaggggtctccgaggttccccctgccccgcacccctgtcctgctgggctgttgtcaagggagctctgtggggtcacacccgcctcatcatctttgcccaataggctgagttcctgcc----aaaggcc-ttt-gtgaagtcactgccaca
i GCA_965140295.1.OZ223117.1        C 0 C 0
e GCF_028017835.1.NC_088684.1       289439072 9432 + 300499247 I
e GCF_027887155.1.NC_071506.1       277627439 3215 + 287939129 I
e GCA_032164245.1.JAVMKO010000013.1  29724141 3433 +  36900886 I
e GCF_025201925.1.NC_066621.1       159736828 5923 - 162938067 I
e GCF_007399415.2.NC_044325.1       154308591 6303 + 155918640 I
e GCA_033349115.1.CM065755.1           367015 5287 - 113643910 I
e GCF_009764565.3.NC_050073.1       128196378   0 - 131128815 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        25509 1199 +     31630  
s GCA_965152275.1.OZ223944.1          4573956 1199 + 132879417  
i GCA_965152275.1.OZ223944.1        n 1193 I 674
s GCA_965152235.1.OZ223887.1        131425300 1200 - 134836623  
i GCA_965152235.1.OZ223887.1        n 1685 I 1113
s GCA_965140235.1.OZ222813.1        130140774 1199 - 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131498248 1200 - 135739771  
i GCA_965140285.1.OZ223564.1        I 485 C 0
s GCA_965140295.1.OZ223117.1        128290004 1200 - 131075015  
i GCA_965140295.1.OZ223117.1        C 0 C 0
e GCF_028017835.1.NC_088684.1       289439072 9432 + 300499247 I
e GCF_027887155.1.NC_071506.1       277627439 3215 + 287939129 I
e GCA_032164245.1.JAVMKO010000013.1  29724141 3433 +  36900886 I
e GCF_025201925.1.NC_066621.1       159736828 5923 - 162938067 I
e GCF_007399415.2.NC_044325.1       154308591 6303 + 155918640 I
e GCA_033349115.1.CM065755.1           367015 5287 - 113643910 I
e GCF_009764565.3.NC_050073.1       128196378    0 - 131128815 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        26708 672 +     31630  
s GCA_965152275.1.OZ223944.1        128233614 674 - 132879417  
i GCA_965152275.1.OZ223944.1        I 1193 I 126
s GCA_965152235.1.OZ223887.1          5547173 674 + 134836623  
i GCA_965152235.1.OZ223887.1        I 1685 I 1034
s GCF_009764565.3.NC_050073.1       128196378  70 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130141973 673 - 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1        131499448 673 - 135739771  
i GCA_965140285.1.OZ223564.1        C 0 n 0
s GCA_033349115.1.CM065755.1           372302  84 - 113643910  
i GCA_033349115.1.CM065755.1        I 5287 C 0
s GCA_965140295.1.OZ223117.1        128291204 673 - 131075015  
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1        30871700  77 - 155918640  
i GCF_007399415.2.NC_044325.1       n 6303 I 1205
s GCF_025201925.1.NC_066621.1       159742751  77 - 162938067  
i GCF_025201925.1.NC_066621.1       I 5923 C 0
s GCA_045781085.1.CM099119.1          9937881  77 +  43609068  
i GCA_045781085.1.CM099119.1        N 0 C 0
s GCF_027887155.1.NC_071506.1       277630654  57 + 287939129  
i GCF_027887155.1.NC_071506.1       I 3215 I 573
s GCF_028017835.1.NC_088686.1       156134297  78 + 158421364  
i GCF_028017835.1.NC_088686.1       I 6630 C 0
e GCA_032164245.1.JAVMKO010000013.1  29724141 3433 +  36900886 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        27380 126 +     31630 acaaatacaccagagcctccaaattgtctgttttac--aaggtctctccttgttct-ggaacact------------gagttctaaacatgccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
s GCA_965152275.1.OZ223944.1          4575829 126 + 132879417 acaaatacaccagagcctccaaattttctgttttac--gaggtctctccttgtttt-ggaacact------------gagttctaaacatgccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
i GCA_965152275.1.OZ223944.1        I 674 n 126
s GCA_965152235.1.OZ223887.1        131427613 126 - 134836623 acaaatacaccagagcctccaaattttctgttttac--aaggtctctccttgtttt-ggaacact------------gagttctaaacatgccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
i GCA_965152235.1.OZ223887.1        I 1113 C 0
s GCF_009764565.3.NC_050073.1       128196448 126 - 131128815 ACAAATACATCAGAGCAtccaaatattctgttttac--aaggtctctccttgtttt-gcaagact------------ggttttgaaacatgccatgggga-atttgaat--caaa---tttcagcttctaatta--g----------catgcgtttgga
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130142646 126 - 133850159 acaaatacaccagagcctccaaattttctgttttac--aaggtctctccttgtttt-ggaacact------------gagttctaaacacaccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6521257 126 + 135739771 acaaatacaccagagcctccaaattttctgttttac--aaggtctctccttgtttt-ggaacact------------gagttctaaacatgccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
i GCA_965140285.1.OZ223564.1        I 62517 T 60655
s GCA_033349115.1.CM065755.1           372386 125 - 113643910 TCAAATACACCAGGGCAGCAGAATTTTCTGTTTTAC--AAGGtctcacct-atttg-gaatccat------------tttttctaaacgtgccatgagga-atttgaac--caaa---tttcagctactaatta--a----------tatgtgtgagga
i GCA_033349115.1.CM065755.1        C 0 I 132
s GCA_965140295.1.OZ223117.1        128291877 126 - 131075015 acaaatacaccagagcctccaaattttctgttttac--aaggtctctccttgtttt-ggaacact------------gagttctaaacacaccatgggga-atttgaat--caaa---tttcagctactaatta--g----------tatgtgtttgga
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       154314894 126 + 155918640 acaaatacaccagagcatcaacatttcctgtttaac--gaggtctctcctt-ttttTggaaccct------------tgtttctaaacatgccatgcagg-atttgaat--caaa---tttcagcaactagttaTCa----------tgtgggtg--ga
i GCF_007399415.2.NC_044325.1       I 6303 C 0
s GCF_025201925.1.NC_066621.1       159742828  32 - 162938067 acaaatacaccagagcatcaacatttcctgtt-------------------------------------------------------------------------------------------------------------------------------
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9937958 124 +  43609068 acaaatgtaccagagcatcaacattttctgttttac--aaggtctctcctt-tatt-gaaaccct------------tgtttctaaacatgc-atgcagg-atttgaat--caaa---tttcagcaactaattaTTa----------tgtgggtg--ga
i GCA_045781085.1.CM099119.1        C 0 I 409
s GCF_027887155.1.NC_071506.1       277631284 151 + 287939129 AAAATTACCCCTTGGTTTCAGAGAATCTTGTTTAATGGAGGGttttttctt-tct-------tttATTTATTTATTTtttttctaaacatgtgcttcattTatttgaatATcaaaCATtttcatttaaaatttcCCaGAGTAAGTTTTGTGCTGGTGAA
i GCF_027887155.1.NC_071506.1       I 573 I 5382
s GCF_028017835.1.NC_088686.1       156134375 126 + 158421364 acaaatacaccagagcatcaaaatgttctgttctac--aaggtctctcctt-tttt-ggaaccct------------tgtt-ctaaacatgccatgtggg-atttgaat--caaa---ttttagctactaattaTCa----------tgtgtgtgtgga
i GCF_028017835.1.NC_088686.1       C 0 I 989
e GCA_032164245.1.JAVMKO010000013.1  29724141 3433 +  36900886 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        27506 721 +     31630  
s GCA_965152275.1.OZ223944.1        128234414 715 - 132879417  
i GCA_965152275.1.OZ223944.1        I 126 N 0
s GCA_965152235.1.OZ223887.1        131427739 717 - 134836623  
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128196574 719 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130142772 660 - 133850159  
i GCA_965140235.1.OZ222813.1        C 0 C 0
s GCA_965140285.1.OZ223564.1          6460728 651 + 135739771  
i GCA_965140285.1.OZ223564.1        T 60655 T 56542
s GCA_033349115.1.JAVFKW010000008.1    580114 707 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 I 60858 C 0
s GCA_965140295.1.OZ223117.1        128292003 659 - 131075015  
i GCA_965140295.1.OZ223117.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       154315020 715 + 155918640  
i GCF_007399415.2.NC_044325.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9938491 711 +  43609068  
i GCA_045781085.1.CM099119.1        I 409 C 0
s GCF_027887155.1.NC_071529.1        12373003 727 -  17025087  
i GCF_027887155.1.NC_071529.1       I 4664 I 421
s GCF_028017835.1.NC_088686.1         2488633 703 - 158421364  
i GCF_028017835.1.NC_088686.1       n 989 I 1791
e GCA_032164245.1.JAVMKO010000013.1  29724141 3433 +  36900886 I
e GCF_025201925.1.NC_066621.1       159742860   0 - 162938067 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        28227 370 +     31630 tttctatta----aaaaa---actaaggaaattaacaaaccaaaaacccttcatttaatgtttcttagtttagctttcatcaagaaat------------taagccgtcaaataa------------tttggatatacaaagtcaaggttttaaaaaggattaaaagattacaacttttagcattctcaggttag-caaatgtccaaataagtgttgccctggcacccttaattcagttgtcttggtcctttgcgtgatgatgcagattttaattacatgatcccatgttatt--ttttt--cccgtcagga-ccctgccttattcagtgcacaagattttctgctctggggc---tgtgtattgaaggagtctgttgtctgtaggatccctgcctcatttattgcagag
s GCA_965152275.1.OZ223944.1        127717796 370 - 132879417 tttctatta----aaaaa---actaaggaaattaacaaaccaaaagcccttcatttaatgtttcttagtttagctttcatcaataaat------------taagccgtcaaataa------------tttggatatacaaagtcaaggttttaaaaaggattaaaaggttacaacttttagcattctcaggttag-caaatgtccaaataagtattgccctggcacccttaattcagtcgtcttggtcctttgcgtgatgatgcagattttaattacatgatcccatgttatt--ttttt--cccgtcagga-ccctgccttattcagtgcacaagattttctgctctggggc---tgtgtattgaaggagtctgttgtctgcaggatccctgcctcatttattgcagag
i GCA_965152275.1.OZ223944.1        N 0 C 0
s GCA_965152235.1.OZ223887.1        131428456 370 - 134836623 tttctatta----aaaaa---actaaggaaattaacaaaccaaaaacccttcatttaatgtttcttagtttagctttcatcaataaat------------taagccgtcaaataa------------tttggatatacaaagtcaaggttttaaaaaggattaaaagattacaacttttagcattctcaggttag-caaatgtccaaataagtgttgccctggcacccttaattcagttgtcttggtcctttgcgtgatgatgcagattttaattacatgatcccatgatatt--ttttt--cccgtcaggaCcc-tgccttattcagtgtacaagattttctgctctggggc---tgtgtattgaaggagtctgttgtctgtaggatccctgcctcatttattgcagag
i GCA_965152235.1.OZ223887.1        C 0 I 2071
s GCF_009764565.3.NC_050073.1       128197293 365 - 131128815 TTTCGATTA----AAAAA---A----AGAAATTAATAAACAAAAAACCCTTCAATTAATGCTATTTAAGTTGGCTTTCATCAATAAAT------------GAAACCATacaataa------------ttaggaaatacaaaatcaagattttaaaaaggattaaaaggttacaaagtttagcttgctcaggttag-caaatatccaaataaatattgccctggcacccttaattcagtcctcttgtgcatttgcatgatgatgcagactttaattacatgatcccgtattatt--ttttc--cc--tcaggaCcccttccttattcagtacacaggattttctgctctggggc---tgtgtattgaaggaatctgttgtctctaggatccctgcctcatttattgcagag
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    580821 370 -   2470581 TTTCTATTAC---AGAAACTAA----GGAAATTAACAAACAAAAAACCCTTCATTTATTGTTACTTAAGTTTGCATTCATCAATCAAC------------TTAACTATCAAATAA------------TTAGGAAATACAAAGTCAAGGTTTTTAAATGGATTAAaaggttacaacgtttcacattctcaggttag-caaatgtccaaattaatgttgccctgacacccttaattcagtcctcttgtgcatttgcatgatgatgcagactttaattacatgatcccttgttgttGTtttttT-cc--acaggaCccctgccttcttcagtgcacaggattttctgctctggggc---tgtgtattgaaggagtctgttgtctgtaggatccctgcctcatatattgcag--
i GCA_033349115.1.JAVFKW010000008.1 C 0 C 0
s GCA_032164245.1.JAVMKO010000005.1  42753729 202 - 108345705 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caggttagGcaaatg--------aaggttgccctggcacccttcattcaggcctcttgtgcatttgcatgatgatgcagaccttaattacatgatcccattttatt--ttca--------caagaCccctgccttcttcagtgcccaggattttctgctctggggc---tgtgtattgaaggagtctgttgtctgtaggatccctgcctcgtttattgctttg
i GCA_032164245.1.JAVMKO010000005.1 I 3433 I 249
s GCF_007399415.2.NC_044325.1       154315735 372 + 155918640 tttctatt-----aaaaaCTAa----ggaaattaagaaacaaaaacccctttgtttaacgttacttaagtttgctttcatcaataaacGAAACCATAAAAtaa------------------------ttaggaaatacaaagtcaaggtttttaaaaggattaaacgtttacaaagttaagtattctcaggttag-caaatgtccaaataaatgttgctctgacatcattaattcagacctcttgtgtatttgcatgatgatacagactttaatgacatgatcccatattatt--tttttCTcc--gcaggaCccgttctttagttagagcacaagattttctgctctggggcAGGggcgtattgaaggagtctgttgtctataggatccctgcctcatttattgcagaa
i GCF_007399415.2.NC_044325.1       C 0 I 518
s GCA_045781085.1.CM099119.1          9939202 368 +  43609068 tttctatt-----aaaaaCTAa----ggaaattaacaaacaaaaacccctttgtttaatgttacttaagtttgctttcatcaataaac------------taa------------ACCATAAAATAAttaggaaatacaaagtcaaggtttttaaaaggattaaacatttacaaagttaagcattctcaggttag-caaatgtccaaagaaatgttgctctgacatcattaattcagacctcttgtgcatttgcgtgatgatgcagactttaatgacatgatcccatattatt--attttTTcc--acaggaCcccttc-ttattcagagcacagggttttcttctctggggc---tgtgtattgaaggagtctgttgtctatcggatccctgcctcatttattgcagaa
i GCA_045781085.1.CM099119.1        C 0 C 0
s GCF_027887155.1.NC_071506.1       277636817 369 + 287939129 TTTCTATTA----AAAAACAAA----GGAAATTAACAAACAAAAACGCCTTCATTTAACgttatttaagtttgctttcatcaataaaa------------taaaccataaaataa------------ttaggaaatacaaagtcaaggatttaaacaggattaaaaggttacaaagttttgcattctcaggttag-caaatgtccaaataagtgttgccctggcacccttaattcagtcctcttgttcatttccatgatgatgcatactttaatgacatgctctcatactatt--tttttT-cc--acgggaCcccttccttattcagtgcacgggattttctgctctggggc---tgtgtactgaaggagtttgttgtctgtaggatccctgcctcatttattgcagag
i GCF_027887155.1.NC_071506.1       I 5382 C 0
s GCF_028017835.1.NC_088684.1       289448504 369 + 300499247 tttctatta----aaaaaCAAa----ggaaattaacaaacaaaacccccttcatttaacgttatttaagtttgctttcatcaataaaa------------taaaccataaaataa------------ttaggaaatacaaagtcaaggatttaaaaaggattaataggttacaaagttttgcattctcaggttag-caaatgtccaaataagtgttgccctggcacccttaattcagtcctcttgttcatttccatgatgatgcagactttaatgacatgatctcatattatt--tttttT-cc--atgggaCcccttccttattcagtgcacgggattttctgctctggggc---tgtgtactgaaggagtttgttgtctgtaggatccctgcctcatttattgcagag
i GCF_028017835.1.NC_088684.1       I 9432 I 533
e GCF_025201925.1.NC_066621.1       159742860   0 - 162938067 C
e GCA_965140295.1.OZ223117.1        128292662   0 - 131075015 C
e GCA_965140285.1.OZ223564.1          6461379 56542 + 135739771 T
e GCA_965140235.1.OZ222813.1        130143432   0 - 133850159 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        28597 509 +     31630  
s GCA_965152275.1.OZ223944.1        127718166 506 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          5548881 501 + 134836623  
i GCA_965152235.1.OZ223887.1        I 1034 C 0
s GCF_009764565.3.NC_050073.1       128197658 486 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    581191 169 -   2470581  
i GCA_033349115.1.JAVFKW010000008.1 C 0 I 693
s GCA_032164245.1.JAVMKO010000006.1  95663075 183 + 106994437  
i GCA_032164245.1.JAVMKO010000006.1 I 4091 n 249
s GCF_007399415.2.NC_044325.1        30872982 518 - 155918640  
i GCF_007399415.2.NC_044325.1       I 1205 I 442
s GCF_025201925.1.NC_066621.1       159742860 514 - 162938067  
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9939570 516 +  43609068  
i GCA_045781085.1.CM099119.1        C 0 I 2
s GCF_027887155.1.NC_071506.1       277637186 514 + 287939129  
i GCF_027887155.1.NC_071506.1       C 0 C 0
s GCF_028017835.1.NC_088686.1       156135490 518 + 158421364  
i GCF_028017835.1.NC_088686.1       I 989 I 442
s GCA_033958435.1.CM066698.1          7212199 197 - 127301102  
i GCA_033958435.1.CM066698.1        N 0 C 0
s GCA_040894355.2.CM105055.1        200232125 179 - 311452600  
i GCA_040894355.2.CM105055.1        N 0 C 0
e GCA_965140295.1.OZ223117.1        128292662   0 - 131075015 C
e GCA_965140285.1.OZ223564.1          6461379 56542 + 135739771 T
e GCA_965140235.1.OZ222813.1        130143432   0 - 133850159 C

a score=0.000000
s GCF_015237465.2.NW_025111247.1        29106 442 +     31630 AGAAAAGGACTAGACTGTTGATTATGGCCTGTCCCTGTaaatagacctgtaatgaggtggcttggcattttaaggactggaggccttagctcagccaaccctagctgctaagaaggcccacctgaacacggatcagctgattctttTACTGATCATCTGGGAGCAGAAGTGGAAGTGGCTGAGAGAATTgtaggagctgcagagaa-----aggaaggagcagcaaggaaggctaaagacagag----tctggcaatagtctctg-------ctctcggggtctttccttca-aggttaaggccagcagc-aaattgccatatgctgttattctccttttgg---ttcgttgtctcttggaaaatata-taaaacccgcctggaagggccagtgagactgatc-tgttgtgagtgcagctgtggagtctggaggagggagagttggattgcagggtgctacagat
s GCA_965152275.1.OZ223944.1        127718672 442 - 132879417 agaaaagacctagatttttgattatggcctgtccctgtaaatagccctgtaatgaggtggcttggcattttaaggactggaggcctgagctcagccaaccctagctgctaagaaggcccacctgaacacggatcagctgattctcttactgatcatctgggagcagaagaggaagtggctgagagagttgcaggagctgcagagaa-----aggaaggagcagaaaggaaggctaaagacaGAG----TCTGGCAATAGTCTCTG-------CTCTCAGGATCTTTCCTTCA-AGGTTAAGGCCAGCAGC-AAATTGCCATATGCTGTTCTTCTCCTTTTGG---TTCGTTGTCTCTTGGAAAATATA-TAAAACCTGGCTggaagggccagtgagactgatc-tgttgtgagtgcagctgtggagactggaggagggagagatggatgacagggtggtacagat
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          5549382 442 + 134836623 agaaaaggacaagattgctgattatggcctgtctctgtaaacagccctgtactgggatggtttggcattttaaggactgaaggcctgagctcagccaaccctagaagctaagaaggcccacctgaacacggatcagtggattct-ttactgatcatctgggggcagaagaggaagtggctgagagaattgcaggagctgaagagaa-----aggaaggagcagcaaggagggctagagacagag----tctggcaataacct-tg-------gaggaaagaccccgagagcaGagactaaggccagcagcAaatttgccttatgctgttcttctccttttgg---ttcgttgtctctaggaaaataaa-taaaacccagctggaagggccagtgagactgatc-tgttgtgagtgcagctgtggagtctggaggagggagagatggattgcagggtgctacagat
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128198144 445 - 131128815 AGAAAAGACCTAGATTTTTAATTGTGGCCTGTCCCCGTAAATAGCCTtataatggggtgtcttggcattttaaggactggaggcctgagctcagccaaccctAGTGGCTAAGAACGCCCACCTGAACACAGATCAGTGGATTCTCTTACTGATAAGCTGGGAGCAGAAGAGGAAGTGTCTGAGAGAGTTGCAGGAGCTGCAGAGAA-----AGGAAGGAGCAGGAAGGAAGGCTAGAGACAGAGAG--TTTGGCAATAACCT-TG-------GAGGAAAGACCCCGAGAGCAGAGACTAAGGCAAGCAGTAAAATTGTCTTATGCTGTTATGTTCCTTTTAG---TTTGTTGTCTCTTGGAAAATAA--TAAAACCTGGCTGGAAGGGCTGGCGAGACTGATCCTGTTGTGAGTGCAGCTGTGGAGCCTGGAGGAGGGAGAGATGGATGGCAGGGTGCTGCAGGA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_965140235.1.OZ222813.1        130143432   1 - 133850159 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_965140235.1.OZ222813.1        C 0 N 0
s GCA_965140285.1.OZ223564.1          6404837   1 + 135739771 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_965140285.1.OZ223564.1        T 56542 N 0
s GCA_033349115.1.CM065755.1           372643 349 - 113643910 --------------------------------------------------------------------------------aggcctaggcccagtcagccctagttgctaagaagacacacctgaacagggatcagctgattcccttactgagctgatg--accagaaaagggagtagctgagagagttgtaggagctgcagagaa-----aggaaggAACAACAAGGACTGCTAGAGACAGAATT--GTTGGCAATAATGT-TG-------GAGGAAAGACCCCGAGAGCAGAGACTAAGGCCAGCAGAAAAAT-GCCTTATGTTGTTATTCTCGTTTTGG---TTTGTTGTCT--------------TAAAACCCTGCTGGAAGGGATAGCAAGATTGATC-TGTTGTGAATGCAGCTGTGGAGACCGGAGGAGGGAGAGATGGATGGCAGGATGCTGCAGAT
i GCA_033349115.1.CM065755.1        I 132 C 0
s GCA_965140295.1.OZ223117.1        128292662   1 - 131075015 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i GCA_965140295.1.OZ223117.1        C 0 N 0
s GCF_007399415.2.NC_044325.1       154316625 441 + 155918640 AGAAAAGTACCAGATTTTCGATTATGGCCTGTCCCTGTAAATAGCCCTGTCATGGGGTGACTTGGCATTATGAGGACTGGAGGCCTGAGCTCAGCCAGTCCTCG-GGCTAAGAAGGCCCACCTGAACAGGGATCAGCTGATTCATTTACTGATCAGCAGGGAGCAGAAGAGGAAGTGTCTGAGAGAGTTGCAGGAGCTGCAGAGAA-----AGGAAGGAGCAGCAAGGACGGCTAGAGAGAGAGAG--TTTGGCAATAACCT-TG-------AAGGAAAGACCCAGAGAGCAGAGACTAAGGCCAGCAACAAAATTGCCTTATGCTGTTCTTCTCCTTTTGG---T---TTGTCTCCTGGAAAATAA-ATAAAATCCCGCTGGAGGGGTCGGCAAGAGTGATC-TGTTGTGAGTGCAGCTCTGGAGCCCGGAGGAGGGAAAGATGGATGGCAGGGTGCTGCAGGA
i GCF_007399415.2.NC_044325.1       I 518 I 484
s GCF_025201925.1.NC_066621.1       159743374 442 - 162938067 AGAAAAGTACCAGATTTTCGATTATGGCCTGTCTCTGTAAATAGCCCTGTCATGGAGTGACTTGGCATTATGAACACTGGAGGCCTGAGATCAGCCAGTCCTCGCGGCTCAGAAGGCCCACCTGAACAGGGATCAGCTGATTCATTTACTGATCAGCAGGGAGCAGAAGAGGAAGTGTCTGAGAGAGTTGCAAGAGCTGCAGAGAA-----AGGAAGGAGCAGCAAGGATGGCTAGAGAGAGAGAG--TTTGGCAATAACCT-TG-------GAGGAAAGACTCAGAGAGCAGAGACTAAGGCCAGCAACAAAATTGCCTTATGCTGTTCTTCTCGTTTTGG---T---TTGTCTCTTGGAAAATAA-ATAAAACCCCGCTGGAGGGGTCGGCAAGAGTGATC-TGTTGTGAGTGCAGCTCTGGAGCCCGGAGGAGGGAAAGATGGATGGCAGGGTGCTGCAGGA
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9940088 444 +  43609068 AGAAAAGGATCAGATTTTCGATTATGGCCTGTCCCTGTAAATAGCCCTGTCATGGGGTGGCTTGGCATTATGAGGACTGGAGGCCTGAGCTCAGCCAATCCTCGCGGCTGAGGAGGCCCACCTGAACAGGGATCAGCTGATTCATGTACTGATCAGCAGGGCGCAGAAGAGGAAGTGGCTgagagagttgcaggagctgcagagaa-----agggaggagcagcaaggacagctagagagagagAGAGtttggcaATAACCT-TG-------GAGGAAAGACCCAGAGAGCAGAGGCTAAGGCCAGCAACAAAACTGCCTTATGCTGTTCTTCTCCTTTTGG---T---TTGTCtcttggaaaataa-AtaaaacccatcTGGAAGGATTGACAAGACTGATC-CATTGTGAGTGCAGCTCTGGAGCCCGGAGGAGggagagatggatggcagggtgCTGCAGGA
i GCA_045781085.1.CM099119.1        I 2 C 0
s GCF_027887155.1.NC_071506.1       277637700 445 + 287939129 AGAAAAGGACTAGATTTTTGATTATGGCCTGTCCCTGTAAATAGCCCCGtcatagggtggcttggcattataaggactggaggcctgagctcagccaatcctagctgctaagaagccccacccgaacagggatcagctgattctcttactgatcagcaaggggcagaagaggaagtgtctgagagagttacaggagctgcagagaa-----aggaagGAACAGCAAGGACAGCTAGAGACGGAGAG--TTTGGCAATAACCT-TG-------GGGGAAAGACCCAGAGAGCAGAGACTAAGGCCAGCAGTGAAATTGCCGTATGCTGTTCTTCTCCTTTTGG---TTTGTTGTCTCTTGGAAAATAA-ATAAAACTCGTCTGGAAGGGCCGGCAAGACTGATC-TGTTGTGAGTGCTGCTGTGGAGCCTGGAGGAGGGAGAGATGGATGGCAGGGTGCTGCAGAC
i GCF_027887155.1.NC_071506.1       C 0 C 0
s GCF_028017835.1.NC_088684.1       289449406 445 + 300499247 agaaaaggactagatttttgattatggcctgtccctgtaaatagccccgtcatagggtggcttggcattataaggcctggaggcctgagctcagccaatcctagctgctaagaagccccacctgaacagggatcagctgattctcttactgatcagcaaggagcagaagaggacgtgtctgagagagttacaggagctgcagagaa-----aggaaggagcagcaaggacggctagagacggagAG--tttggcaataacct-tg-------gggaaaagacccagagagcaGagactaaggccagcagtGaaattgccgtatactgttcttctccttttgg---tttgttgtctcttggaaaataa-Ataaaactcgtctggaagggccggcaagactgatc-tgttgtgagtgctgctgtggagcctggaggagggagagctggatggcagggtgctgcagac
i GCF_028017835.1.NC_088684.1       I 533 I 1075
s GCA_033958435.1.CM066698.1          7212396 354 - 127301102 AGAAAAGGACTAGATATTTCATTATGGCTTGTCCTTGGCAGTAGCCCTCTAATGGCGTGGCTTAGCATTTTAAGGGATAAAGGCCTGTGCTCAGCCAGTTCTGGTTGCTAAGAAGGCACACCTGAAAGGGGATCAGCTGATGTTCTTACTGTTCAGTGGGAAGCAGAAGAGGAAATGGTTGAGGGAGTTGCAGGAGCTGC-----A-----AAAAAGAAACAGCAAGAACTATTAGAGACACCGAG--GTTGGAAATAAGCT-CG-------GAAGAAAGATCCTGAGAGCAGAGACTAAGGCCAGCAGTTAAATTGCTGTATGCTGTTATTCTCACTTTGG---TTTGTTGTGTCTTGGAAAATGA-CTAAAAGCT---------------------------------------------------------------------------------------T
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        200232304 349 - 311452600 ---AAAAGACTTGATTTTTGATTATGGCCTGTCCCTGTAATTAACACTGTAATGAGGTGTCTGGGTATTTTAAAGGCCCAAGGCCTGAGTCCAACCAACCCCAGTTGTTAAGAAGGC-------AACACCTATTAGCTGAGTCCCTTATTGAGCAGCAAGGAACAGAAAAGGAAGTGGCTGAAAGAgttgcaggagctgc-----aGAGAAaggaaggaacagCTAGGACTGCCAGTGACCGAGGG--CTTGGCAGTAACCT-TG-------GAAAAAAGCTTCAGAGAGTAGAGACGAAGGCCAGCAGAAAAATTGCCTTATGCTGTTATTCTCATTTTGGGTTTTTGT---Ctcttggaaaataa-Ataaaacct---------------------------------------------------------------------------------------t
i GCA_040894355.2.CM105055.1        C 0 I 218
e GCA_032164245.1.JAVMKO010000006.1  95663258 249 + 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        29548 491 +     31630  
s GCA_965152275.1.OZ223944.1        127719114 491 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 C 0
s GCA_965152235.1.OZ223887.1          5549824 491 + 134836623  
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128198589 497 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.CM065755.1           372992 469 - 113643910  
i GCA_033349115.1.CM065755.1        C 0 I 60
s GCF_007399415.2.NC_044325.1        30873942 496 - 155918640  
i GCF_007399415.2.NC_044325.1       I 442 I 553
s GCF_025201925.1.NC_066621.1       159743816 494 - 162938067  
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9940532 497 +  43609068  
i GCA_045781085.1.CM099119.1        C 0 C 0
s GCF_027887155.1.NC_071506.1       277638145 478 + 287939129  
i GCF_027887155.1.NC_071506.1       C 0 I 597
s GCF_028017835.1.NC_088686.1       156136450 477 + 158421364  
i GCF_028017835.1.NC_088686.1       I 442 I 936
s GCA_033958435.1.CM066698.1          7212750 465 - 127301102  
i GCA_033958435.1.CM066698.1        C 0 C 0
s GCA_040894355.2.CM105055.1        200232871 508 - 311452600  
i GCA_040894355.2.CM105055.1        I 218 C 0
e GCA_032164245.1.JAVMKO010000006.1  95663258 249 + 106994437 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        30039 665 +     31630  
s GCA_965152275.1.OZ223944.1        127719605 636 - 132879417  
i GCA_965152275.1.OZ223944.1        C 0 N 0
s GCA_965152235.1.OZ223887.1          5550315 638 + 134836623  
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128199086 633 - 131128815  
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.CM065755.1           373521 615 - 113643910  
i GCA_033349115.1.CM065755.1        I 60 C 0
s GCA_032164245.1.JAVMKO010000005.1  42754180 481 - 108345705  
i GCA_032164245.1.JAVMKO010000005.1 I 249 I 267
s GCF_007399415.2.NC_044325.1       154317550 549 + 155918640  
i GCF_007399415.2.NC_044325.1       I 484 C 0
s GCF_025201925.1.NC_066621.1       159744310 534 - 162938067  
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9941029 546 +  43609068  
i GCA_045781085.1.CM099119.1        C 0 C 0
s GCF_027887155.1.NC_071529.1        12374151 565 -  17025087  
i GCF_027887155.1.NC_071529.1       I 421 I 349
s GCF_028017835.1.NC_088686.1         2491127 571 - 158421364  
i GCF_028017835.1.NC_088686.1       I 1791 I 762
s GCA_033958435.1.CM066698.1          7213215 130 - 127301102  
i GCA_033958435.1.CM066698.1        C 0 I 9986
s GCA_040894355.2.CM105055.1        200233379 120 - 311452600  
i GCA_040894355.2.CM105055.1        C 0 N 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        30704 3 +     31630 GCC
s GCA_965152275.1.OZ223944.1          5089218 3 + 132879417 gcc
i GCA_965152275.1.OZ223944.1        N 0 I 282
s GCA_965152235.1.OZ223887.1          5550953 3 + 134836623 gcc
i GCA_965152235.1.OZ223887.1        C 0 I 282
s GCF_009764565.3.NC_050073.1       128199719 3 - 131128815 GCC
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.CM065755.1           374136 3 - 113643910 GCC
i GCA_033349115.1.CM065755.1        C 0 C 0
s GCF_007399415.2.NC_044325.1       154318099 3 + 155918640 GCC
i GCF_007399415.2.NC_044325.1       C 0 I 362
s GCF_025201925.1.NC_066621.1       159744844 3 - 162938067 GCC
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9941575 3 +  43609068 GCC
i GCA_045781085.1.CM099119.1        C 0 C 0
s GCF_027887155.1.NC_071506.1       277639220 3 + 287939129 GCC
i GCF_027887155.1.NC_071506.1       I 597 C 0
s GCF_028017835.1.NC_088684.1       289450926 3 + 300499247 gcc
i GCF_028017835.1.NC_088684.1       I 1075 C 0
s GCA_033958435.1.CM066698.1          7223331 3 - 127301102 ttt
i GCA_033958435.1.CM066698.1        I 9986 I 1637
e GCA_032164245.1.JAVMKO010000005.1  42754661 267 - 108345705 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        30707 281 +     31630 CAAGCACTGAT---GTTGCCCAATGCAGCTATCCACTAAATTGCAGGGGATA-TTACACCTAAG-AAgaaat-cctgggtcattgaaactaatgggaattttgccatagacttcagtgaagccaagattAAATATGTGGGGAGTGATGGTCGAGCATTCTCACT-GG------GGGCTCTTCTAAACCTGGAGCTCATTTCCCTGG--------GTACACA---GGCCAAAACTCT-GAGTTTTCAAGGC---------ACAGCGTAAGGCTCAGCTCTTTCTCTGACTGCTGTGTGGAGGTTTGGTTGTGGTGA
s GCA_965152275.1.OZ223944.1        128237581 282 - 132879417 caagcacagat---aTTGCCCAATGCAGCTATCCACTAAATTGCAGGGGATA-TTACACCTAAG-AAgaaat-cctgggtcattgaaactaatgggaattttgccatagacgtcagtgaggccaagattAAATAAGTGGGGAGTGATGGTCGAGTATTCTCACTGGG------GGGCTCTTCTAAACCTGGAGGTCATTTCCCTGG--------ATACACA---GGTCAAAACTCT-GAGTTTTCAAGGC---------ACAGCGTAAGGCTCAGCTCTTTCTCTGACTGCTGTGTGGAGGTTTGGTTGTGGTGA
i GCA_965152275.1.OZ223944.1        n 282 n 282
s GCA_965152235.1.OZ223887.1        131430897 282 - 134836623 caagcacagat---attgcccaatgcagctatccactaaattgcaggggata-ttacacctaag-aaaaaaaAcctgggtcattgaaactaatgggaattttgccataaacttcagtgaggccaagattaaatatgtggggagtgatggtcgagcattctcactGgg------ga-ctcttctaaacctggaggtcatttccctgg--------gtacaca---ggtcaaaactct-gtgttttcaaggc---------aaagtgtaaggctcagctctttctctgactgctgtgtggaggtttggttgtggtga
i GCA_965152235.1.OZ223887.1        I 2071 I 303
s GCF_009764565.3.NC_050073.1       128199722 264 - 131128815 CAAGCACAGAT---ACTGCCCAGTGCAGCTGTCCACTAAATTGCAGGGGATA-TTACACCTAgg-ctgaaat-cctgggccattgaaaccaatgggaattttgccatagacttcagtgaggccaatattAAATATGTGGGGAGTGATGGTTGAGCATTCTCACTGGG------AA-GTCTTCTAAACCTAGAGGTCATTTCCCTGA--------GT-----------CTAAACTCT-GAGT------------------GCAGTGTGCAGTGCAGCTCTGTCTCTGAGTGCAATGTGGAGATTTGGTTGTGATGA
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.CM065755.1           374139 280 - 113643910 CAAGCACAGCT---ACTGTCAAATGCAGCTGTCCACCAAATTGCTGGGGATACTTACGCCgagg-gtaaaat-cctggcccactgaaactaatggaagttttgcaatggacttcaataagggcaggattAAATATGTGGGGAGTGGTGGTTGAGCATTTTCACTGGG------GA-GTCTTC-AAACCTGAAGGTCATTTCCCTATGTGCACACGT-----------TGAAACTCT-GAGA---------TTTCAAGTCACAGTGTATGGCTCAGCTATTTCTCCGACTGCCGTGTGAAGGTTT-ATTGTGGTGA
i GCA_033349115.1.CM065755.1        C 0 I 80
s GCF_007399415.2.NC_044325.1        30874991 285 - 155918640 CAAGCACAGCTGCTACTTCCAAATGCAGCTGTCCACTAAATTGCAGCAGATA-TTACACCTAag-ataaaat-cctggaccattgaaaccaatggtaattttgccatagacttcaatggggccaagattaaatatgtgaggagTGATGGTTGAGCATTCTCAAGGGG------GA-GTCTTCTAAACCTGAAGGTCATTTCCCTGGGTACACACGT-----------CCAAACTCTTGAGT---------TTTCAAGGCACAGTGTAAGGCTCAGCTCTTTCTCTGTGTGCCATGTGGAGGTTTGGTTGTGTCGA
i GCF_007399415.2.NC_044325.1       I 553 I 290
s GCF_025201925.1.NC_066621.1       159744847 282 - 162938067 CAAGCACAGCT---ACTGCCAAATGCAGCTGTCCACTAAATTGCAGAAGATA-TTACACCTAAG-AGggaat-cctgggcccttgaaaccaatggtaattttgccatagacttcaatggggccaagattaaatatgtgaggagtaaTGCTCGAGCATTCTCACGGGG------AA-GTCTTCTAAACCTGAAGGTCTTTTCCCTGGGTACACACGT-----------CCAAACTCTTGAGT---------TTTCAAGGCACAGTGTAAGGCTCAGCTCTTTCTCTGAGTGCTATGTGGAGGTTTGGTTGTGTTGA
i GCF_025201925.1.NC_066621.1       C 0 I 80
s GCA_045781085.1.CM099119.1          9941578 281 +  43609068 CAAGCACAGCT---ACTGCCAAATGCAGCAGTCCACTAAATTGCAGCAGATA-TTTCACCTAAG-AGGAAAT-CCCGGGCCATTGAACCTAATGGTaattttgccatagacttcaatggggccaagattaaATATGTGAGGAGCGATGGTCAAGCATTCTCACAGAA------GA-GTCTTCTAAACCTGAAGGTCATTTCCCTGGGTACACGCGT-----------CCAAACTCT-GAGT---------TTTAAAGGCACAGTGTAAGGCTCAGCTCTTTCTCTGAGTGCCATGTGGAGGTTTGGTTGTGTGGA
i GCA_045781085.1.CM099119.1        C 0 I 80
s GCF_027887155.1.NC_071506.1       277639223 281 + 287939129 CAAGAACAGCT---GCTGCCAAATGCAGCTGTCCACTGAATTGCAGAGgata-ttagacctagg-aggaaat-cctgggccattgaaactaatgggaattttgccatagacttcaatgaggccgagattAAATATGTGGAGAGTGATGGTCGAGCATTCTCACTGGG------GT-GTCTTCTACACCTGGAGGTCATTTCCCTGGGCACACACGT-----------CCAAACTCT-GAGT---------TTTCAAGGCACAGCATAAGGCTCAGCTCTTTCTCTGAGTGCCGTGTGGCGGTTTGGTTGTGGCGA
i GCF_027887155.1.NC_071506.1       C 0 I 80
s GCF_028017835.1.NC_088684.1       289450929 281 + 300499247 caagaacagct---gctgcccaatgcagctgtccactgaattgcagaggata-ttagacctagg-aggaaat-cctgggccattgaaactaatgggaattttgccatagacttcaatgaggccaagattaaatatgtggagagtgatggtcgagcattcttacgGgg------ga-gtcttctaaacctggaggtcatttccctggGTACACACgt-----------ccaaactct-gagt---------TTTCAAGGCacagtgtaaggctcagctctttctctgagtgccgtgtggaggtttggttgtggcga
i GCF_028017835.1.NC_088684.1       C 0 I 80
s GCA_033958435.1.CM066698.1          7224971 277 - 127301102 CTGGCACAGCT----CTGCTGGCTGCAGCTTTTCACTAAATTGCAGTGGATATTTACAC---AG-ATCaaat-cctggcccgttgaaacccaggggagttttgccatggacttcaaagAGGCGAACACTAAATGTGCGAAGAGTTATGGTCGCGCATTCTCAATGGG------GA-GTCTTCTGAACCTGATGGTCATTGCCTTGAATACACAGGC-----------CAAAACG-T-GTGC---------TTCCTCAGCAAAGTGTAAAGCTCAGTACTTTTTCTGACCGTCAGGTGGAGGTTTGGTTGTGGTGA
i GCA_033958435.1.CM066698.1        I 1637 I 57
e GCA_032164245.1.JAVMKO010000005.1  42754661 267 - 108345705 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        30988 2 +     31630 GC
s GCA_965152275.1.OZ223944.1          5089503 2 + 132879417 GC
i GCA_965152275.1.OZ223944.1        I 282 I 208
s GCA_965152235.1.OZ223887.1          5551238 2 + 134836623 gc
i GCA_965152235.1.OZ223887.1        I 282 C 0
s GCF_009764565.3.NC_050073.1       128199986 2 - 131128815 GC
i GCF_009764565.3.NC_050073.1       C 0 I 71
s GCA_033349115.1.CM065755.1           374499 2 - 113643910 GC
i GCA_033349115.1.CM065755.1        I 80 C 0
s GCF_007399415.2.NC_044325.1       154318464 2 + 155918640 GC
i GCF_007399415.2.NC_044325.1       I 362 C 0
s GCF_025201925.1.NC_066621.1       159745209 2 - 162938067 GC
i GCF_025201925.1.NC_066621.1       I 80 C 0
s GCA_045781085.1.CM099119.1          9941939 2 +  43609068 GC
i GCA_045781085.1.CM099119.1        I 80 C 0
s GCF_027887155.1.NC_071506.1       277639584 2 + 287939129 GC
i GCF_027887155.1.NC_071506.1       I 80 n 80
s GCF_028017835.1.NC_088684.1       289451290 2 + 300499247 GC
i GCF_028017835.1.NC_088684.1       I 80 n 80
s GCA_033958435.1.CM066698.1          7225305 2 - 127301102 GC
i GCA_033958435.1.CM066698.1        I 57 C 0
e GCA_032164245.1.JAVMKO010000005.1  42754661 267 - 108345705 I

a score=0.000000
s GCF_015237465.2.NW_025111247.1        30990 208 +     31630 TGAGTCCAATGAAAATAAATCA-TTCCCGTGAATTGAATGGCCTTT--CAGTGATATGGCCAGCTGAATTGCTCTACTGAGCATTATGTAGAATGTGTTTACATTCGTCTTTTCTCTGATGTTTTTAACTCCATCTTTCCTT-GAATTAT--------AT--------AAAGGGGAATTCGACAGCCTCTTTGGAGAGAACTTTTTGCTTGCAGATAGATAGA------------TCGAT
s GCA_965152275.1.OZ223944.1        127720526 208 - 132879417 TGAGTCCAATGGAAATAAATCA-TTTCCGTGAATTGAATGGCCTTT--CAGTGATACGGCCAGCTGAGTTGCTCTACTGAGCATTATGTAGAATGTGTTTACATTCCTCTTTTCTCTGATGTTTTTAACTCCATCTTTCCTT-GAATTAT--------AT--------AAAGGGGAATTCGACAGCCTCTTTGGAGAGAACTTTTTGCTTGCAGATAGATAGA------------TAGAT
i GCA_965152275.1.OZ223944.1        n 208 n 208
s GCA_965152235.1.OZ223887.1          5551240 208 + 134836623 tgagtccaatgaaaataaatca-tttccgtgaattgaatgggcttt--cagtgatatggccagctcagttgctctactgagcattatgtagaatgtgtttacattcatcttttctctgatgtttttaactccatctttcctt-gaattat--------at--------aaaggggaattcgacatcctcttttgaaagaactttttgcttgcagatagataga------------tagat
i GCA_965152235.1.OZ223887.1        C 0 C 0
s GCF_009764565.3.NC_050073.1       128200059 222 - 131128815 TGAGTCCAATGAAAATAAACCA-TTTCTGTGAATTGAAGGGGCTTTTCCAGTGACATGGTCAGCTCAGATGCTCTATGGAGCATTATGTAGAATGTGTTTACATTAGTCTTTTCTCTGATGTTTTAAAGTCCATCTTTCCTT-GAATTAT--------GT--------AGAGGGGAATTCCGCCACTTCTTTTGAGATCACTTTTTGCCTTCATATATATATAATTTTGCCTGCATATAT
i GCF_009764565.3.NC_050073.1       I 71 C 0
s GCA_033349115.1.CM065755.1           374501 211 - 113643910 TGAGTCCAATGAAAAAAAATCA-TTTCTGAGAATCGGATGTGCTTT--CAGTGACGTGGTCGGCTCAGATGCCCACTTGAGCATGTTATAGAATATATTTAGATTAGTCTGTTCTCTTACATTTTAAACTCTGTCTCTCCTT-GAATGAC--------GTCATATGGTAAAAGGGAATTCCACTCTCTCTTTTGAGATCACTTTTGACTTCCATATATATATA-----------------
i GCA_033349115.1.CM065755.1        C 0 I 125
s GCA_032164245.1.JAVMKO010000006.1   1977733 129 - 106994437 ---------------------------------------------------------------------------------caatatgtagaatgtgtttatattagtattttctctgatgtttttaactccatcttgcctt-gaattat--------at--------aaaggggaattccaccatctcttttgagagtacttttggcttgcatat-gataga------------tagat
i GCA_032164245.1.JAVMKO010000006.1 I 60988 n 267
s GCF_007399415.2.NC_044325.1       154318466 208 + 155918640 TCAGTCCAATGAAAATAAATCA-TTTCTGTGAATCGAATGGGCTTT--CATTGATATGGTCAGCTCAGGTGCTCTACTGAGCACTATGGAGAATGTGTTTACATTAGTCTTTTCTCTGATGTTTTTAACTCCATCTTTCCT-TGAATTAT--------AT--------AGAGGGGAATTCTACAGCCTCTTTTGAGAGCACTTTTCGCTTGCACATAGATAGA------------TAGAT
i GCF_007399415.2.NC_044325.1       C 0 I 125
s GCF_025201925.1.NC_066621.1       159745211 208 - 162938067 TCAGTCCAATGAAAATAAATCA-TTTCTGTGAATCGAATGGGCTTT--CATTGATATGGTCAGCTCAGATGCTCTACTGAGCGCTATGTAGAATGTGTTTACATTAGTCTTTTCTCTGATGTTTTTAACTCCATCTTTCCT-TGAATTAT--------AT--------AGAGGGGAATTCTACAGCCTCTTTTGAGAGCACTTTTTGCTTGCACATAGATAGA------------TAGAT
i GCF_025201925.1.NC_066621.1       C 0 C 0
s GCA_045781085.1.CM099119.1          9941941 208 +  43609068 TCAGTCCAATGAAAATAAATCA-TTTCTGTGATTCGGATGGGTTTT--CATTGATATGGTCAGATCAGATGCTCTACTAagcattatgtagaatgtggttacattagtcttttctctgatgtttttaactccatctttcct-Tgaattat--------at--------agaggggaattctacagcctcttctgagagcaccttttgcttgcagatagataga------------tagat
i GCA_045781085.1.CM099119.1        C 0 C 0
s GCF_027887155.1.NC_071529.1        12375065 209 -  17025087 TCAGTCCAATGAAAATAAATCATTTTCTGTGAATCGGATGGGCTTT--CAGTGACATGGTCCGCTCAGATGCTCTACTGAGCATTATGTAGAATGTGTTTACATTAGTCTTTTCTCTGATGTTTTTAACTCCATCTTTCCT-TGACTTAA--------AT--------AGAGGGGAATTCTACAGCCTCttttgagagcacttttcgcttgcacatagataga------------tagat
i GCF_027887155.1.NC_071529.1       I 349 C 0
s GCF_028017835.1.NC_088686.1       156137863 208 + 158421364 TCAGTCCAGTGAAAATAAATAATTTTCTGTGAATCGGATGGGCTTT--CAGTGACATGGTCAGCTCAGATGCTCTCCtgagcattatgtagaatgtgtttacattagtcttttctctgatgtttttaactccatctttc-t-Tgaattat--------ag--------agaggggaattctacagcctcttttgagagcacttttcgcttgcacatagataga------------tagat
i GCF_028017835.1.NC_088686.1       I 936 C 0
s GCA_033958435.1.CM066698.1          7225307 202 - 127301102 TGAGTCCTAGGAAAACACATCA-TTCCCGGGAATCAGATGGGCTCA--CA--GACATGGTTCACTCAGATGCTCTACTG----------AAAATGTGTTTATGTTAGTCTCTTCTACGGTATTTTAAACTCCAGCTTTCCTT-GAATCATGTCCAATGGT--------AAAGGGAAATTCTTTCGCCTCTTTTGAGATCAATTGTGACTTGCAC--GGAGAGA------------GAGAA
i GCA_033958435.1.CM066698.1        C 0 C 0

a score=0.000000
s GCF_015237465.2.NW_025111247.1        31198 93 +     31630 CTGAGCACTGTGAACTGGCAGGAGAGCTCTTTTAGCATCAGTCCT-----------GCTCTTCCTTTAAAAGTGGGGGCAGGAAATAATTACATTATAGCAAAT
s GCA_965152275.1.OZ223944.1          5089713 93 + 132879417 CTGAGCACTGTGAACAGGCAGGAGAGCTCTTTTAGCATCAGTCCT-----------GCTCTTCCTTTAAAAGTGGGGGTAGGAAATAGTTACATTATAGGAAAT
i GCA_965152275.1.OZ223944.1        I 208 N 0
s GCA_965152235.1.OZ223887.1          5551448 93 + 134836623 ctgagctatgtgaacaggcaggagagctcttttagcatcaatcct-----------gctcttcctttaaaagtgggggtaggaaatagttacattatagcaaat
i GCA_965152235.1.OZ223887.1        C 0 n 0
s GCF_009764565.3.NC_050073.1       128200281  4 - 131128815 C----------------------------------------------------------------------------------------------------ATT
i GCF_009764565.3.NC_050073.1       C 0 C 0
s GCA_033349115.1.JAVFKW010000008.1    582053  4 -   2470581 A----------------------------------------------------------------------------------------------------AAT
i GCA_033349115.1.JAVFKW010000008.1 I 693 n 125
s GCA_032164245.1.JAVMKO010000005.1  42754928  4 - 108345705 a----------------------------------------------------------------------------------------------------aat
i GCA_032164245.1.JAVMKO010000005.1 I 267 C 0
s GCF_007399415.2.NC_044325.1        30875566  4 - 155918640 a----------------------------------------------------------------------------------------------------gat
i GCF_007399415.2.NC_044325.1       I 290 n 125
s GCF_025201925.1.NC_066621.1       159745419  1 - 162938067 G-------------------------------------------------------------------------------------------------------
i GCF_025201925.1.NC_066621.1       C 0 I 124
s GCA_045781085.1.CM099119.1          9942149  4 +  43609068 a----------------------------------------------------------------------------------------------------gat
i GCA_045781085.1.CM099119.1        C 0 I 229
s GCF_027887155.1.NC_071529.1        12375274  4 -  17025087 a----------------------------------------------------------------------------------------------------gat
i GCF_027887155.1.NC_071529.1       C 0 I 137
s GCF_028017835.1.NC_088686.1       156138071  4 + 158421364 a----------------------------------------------------------------------------------------------------gat
i GCF_028017835.1.NC_088686.1       C 0 n 0
s GCA_033958435.1.CM066698.1          7225509  4 - 127301102 T----------------------------------------------------------------------------------------------------GAG
i GCA_033958435.1.CM066698.1        C 0 I 125

a score=0.000000
s GCF_015237465.2.NW_025111247.1        31291 339 +     31630 TTCTATGA---AG---CTCTCTGATCTCTGGTTCAGAGTCTCTCTTGAGAAGGAATTTGGTCTGCAGGGGCATTTGGCTTCACCGGTCttt--tta-tgaaacactgaataaacacacagtaattgccagattggatcagacctgaactccatct-----a-----gtg-----tcttgtctctgatagtggctagtactagatgtttcaaaagaaggtttaatgacctttaatagtcagatgtggaataatcagcccttccccgcatctcgccctgaaccctaatagctagaga-----ttcatttaagccctgaagcataatg-tt-agtatcccttAAGCATCCAGATCCATACACTATGCTATATA
s GCA_965152275.1.OZ223944.1        128238166 339 - 132879417 TTCTATTA---AG---CTCTCTGATCTCTGGTTCAGAGTCTCtcttgagaaggaatttggtctgcaggggcatttggcttcaccggtcttt--tta-tgaaacactgaataaacacacagtaattgccagattggatcagacctgaactccctct-----a-----gtg-----tcttgtctctgatagtggctagtaccagatgtttcaaaagaaggtttaatgaccttcaatagtcagatgtggaataatcagcccttccctgcatctcgccctgaactctaatagttagaga-----ttcatttaagccctgaagcatgatg-tt-agtatcccttaagcatccAGATCCATATACTATGCTATATA
i GCA_965152275.1.OZ223944.1        N 0 N 0
s GCA_965152235.1.OZ223887.1        131431482 339 - 134836623 ttctatga---ag---ctatctgatctctggttcagagtctctcttgagaaggaatttggtctgcaggggcatttggcttcaccagtcttt--tta-tgaaacactgaataaacaaacagtaattgccagattggatcagacctgaactccatct-----a-----gtg-----tcttgtctctgatagtggatagtactagatgtttcaaaagaaggtttaatgacctttaatagtcagatgtggaataatcagcccttccccgcatctcgccctgaattctaatagttagaga-----ttcatttaagccctgaagcataatg-tt-agtatcccttaggcatccagatccatacactatgctatata
i GCA_965152235.1.OZ223887.1        I 303 N 0
s GCF_009764565.3.NC_050073.1       128200285 347 - 131128815 TGCTATAATGCAA---CTATCTGACCTCTGGTTCAGAGTCTCTCTTTAGAAGGAATTTGGCCTGCAGGGGCATTTGgattcacttgtcttt--tt--tgaaacactgaataaacagacagaaattgtcagattggatcagacctgagctccatct-----a-----gtgCAGTGtcttgtctctgatagtggctagtaccagatgtttcaaaagaaggtttaatgacctttaatagtcagatgtggcataatcaacccttccccgcatcttgtcctgaactctaatagttagaga-----ttcatttaagccctgaagcatgatg-ttTagtatcccttAAGCATCTGGATCCATACAATATGTCATATA
i GCF_009764565.3.NC_050073.1       C 0 N 0
s GCA_033349115.1.CM065755.1           374837 345 - 113643910 TGCTATAA---TGTAACTATCTGATCTCTGGTTCAGATTCTCTCTTTAGAAAGAATTTGGTGTGCAGAGGCGGTTGCTTTCACCAGTCTTTGTTT-ATGAGCCACTGaataaaca--taggaattgctatattggatcagatctgagctgcacctAGTTGa-----gtg-----tcttgtctctgatagtggctagtaccagatgtttcaaaag---gtttaataaccttcagtaggcagatgtgggataatcagcccctccccacatctcactgtgatctctaatagctagagg-----ttggtttaagccctgaagaaagatgTtt-agtatcccttAAGCATCTGCATCCATGCATTGTGCCATGTA
i GCA_033349115.1.CM065755.1        I 125 N 0
s GCA_032164245.1.JAVMKO010000005.1  42754932 325 - 108345705 ttctagga---ag---ctatctgacctttggttcagattctctctttagaaggaatttgttctgcagaagcatttgaattcaccagtcttt--tt-Atgaaacactgaataaacacatagaaattgccagattggatcagacatgag------------------------------tgtctctgatagtggctagtatgagatgtttcaaaagaaggtttaataaccttcaataggcagatgtggaataatcagcccttccacccatctcatcctgatctctaataattagaga-----ttcatttaagccctgaagcatgatgTtt-agtatcccttaagcatccgcatccatacactataccatata
i GCA_032164245.1.JAVMKO010000005.1 C 0 N 0
s GCF_007399415.2.NC_044325.1       154318799 341 + 155918640 TGCTGTAATGTAA---CTAGCTGAGCTCTGGTTCAGATTCTCTCTTTAGAAGGAATCTGGTCTGCAGAAGCATTTGGATTCACCATTCTTt--tt-Atgaaacactgaataaacacacagaaattgccagattggatcagacttgagctccatct-----a-----gtc-----ttttgtctttcatagtg-ctagtaccagatgttacaaaagaaggtttaataaccttcaatgggcaggtgtggaatagtcagcccttcc-cccatctcgccctgatctctaatagttagaga-----tttgtgtaagtcgtgaaacatgatg-ttTcatattccttAAACATCCACATCCATACACTATACCATATA
i GCF_007399415.2.NC_044325.1       I 125 N 0
s GCF_025201925.1.NC_066621.1       159745544 342 - 162938067 TGCTGTAATGTAA---CTAGCTGAGCTCTGGTTCAGATTCTCTCTTTAGAAGGAATCTGGTCTGCAGAAGCATTTGGATTCACCATTCTTT--TT-ATGAAACAATGAAAAAACACACagaaattaccagattggatcagatttgagctccatct-----g-----gtc-----ttttgtctctcatagtggccagtaccagatgctgcaaaagaaggtttattaaccttcaatgggcaggtgtggaatagtcagcccttcc-cacatctcgccctgatctctaatagttagaga-----tttgtgtaagtcgtgaaacatgatg-ttTcatattccttAAGCATCCACATCCATACACTATGCCATATA
i GCF_025201925.1.NC_066621.1       I 124 N 0
s GCA_045781085.1.CM099119.1          9942382 285 +  43609068 TGCTATAATGTAA---CTAGctgggctctggttcagattctctctttagaaggaatttggtctgcagaagcatttggattcaccggtcttt--tt-Atgaaatactgaataaacacacagaaattgccagactcgatcagacttgagctccatct-----a-----gtg-----tcttgtctctcatagtggctagtaccagatgttgcaaaagaaggtttaataacctccaataggcaggtgtggaataatcagcccttcc-cccatgtcaccctgatttctaatagttagaga-----tttgttgaagtc----------------------------------------------------------
i GCA_045781085.1.CM099119.1        I 229 N 0
s GCF_027887155.1.NC_071529.1        12375415 348 -  17025087 tgctagaaTGTaa---ctatctgatctctggttctgattgtctctttagaaggaatttggtctgcagaagcatttggattcaccggtcttt--tt-Atgaaacactgaataaacacacagaaattgccagattggatcagacctgagctccatct-----a-----gtg-----tcttgtctctgatagtgactagtaccagatgtttcaaaagaaggtttaataaccttcaataggcagatgtggaataatcagccctttcccccatctcgccctgatctctcatagttagagaAGAGAttggtttaagccctgaagcataatg-ttTagtattccttaagcatccgcatccacacaccatgccatata
i GCF_027887155.1.NC_071529.1       I 137 N 0
s GCF_028017835.1.NC_088686.1         2492460 343 - 158421364 tgctataaTGTaa---ctatctgacctctggttcagattctctcttgagaaggaatttggtctgcagaagcatttggattcactggccttt--tt-Atgaaacactgaataaacacacagaaattgccagattggatcagacccgagctccatct-----a-----gtg-----tcttgtctctgatactggctagtaccagatgtttcaaaagaaggtttaataactttcaataggcagatgtggaataatcagcccttccccccatcttgccctgatctctcatagttagaga-----ctggtttaagccctgaagcataatg-ttTagtattccttaagcatccgcatgcacacaccatgccatata
i GCF_028017835.1.NC_088686.1       I 762 N 0
s GCA_033958435.1.CM066698.1          7225638 268 - 127301102 TGTTAGAATGGAA---CTAACTGATCTCTAGTTCAGATTCTCTCTTTAAAAGGAATCTGGCCTGCAGAGGCATTTGGGTTCACCAATCGTT--TT-ATGAAATACCGATTCA--ACATAGGAATGGCCAGAACACCACAGACTTGAGCTCCATCT-----AGAGCTGCG-----TATTGCCTCTGATGGTGGCTCATACCAGCTGTTCCTAAAGAAGGTTTAATAACTTTCTATATGCAGATATGGAAAAATTGGCCCT----------------------------------GA-----TAACTGTAAGCCCCGAAGCATGATA---------------------------------------------
i GCA_033958435.1.CM066698.1        I 125 N 0

