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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_034888 NT_023744 NT_034889 NT_023736 NT_019483 NT_034992
NT_008010 NT_034890 NT_034891 NT_015280 NT_030737 NT_023704 NT_008205 NT_008300
NT_023666 NT_007988 NT_030743 NT_033197 NT_034923 NT_007995 NT_008251 NT_008045
NT_034911 NT_008176 NT_034910 NT_034921 NT_008216 NT_034892 NT_023678 NT_017431
NT_023806 NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101
NT_008050 NT_008231 NT_008183 NT_034893 NT_034894 NT_029343 NT_008218 NT_030735
NT_008166 NT_023676 NT_023821 NT_034895 NT_008209 NT_008055 NT_008186 NT_034896
NT_007972 NT_008292 NT_034897 NT_008117 NT_023717 NT_034898 NT_008007 NT_034899
NT_008059 NT_008046 NT_034900 NT_008048 NT_023811 NT_031821 NT_023663 NT_008157
NT_023726 NT_008023 NT_030744 NT_023709 NT_008150 NT_025796 NT_034912 NT_007994
NT_028251 NT_034973 NT_034970 NT_023662 NT_033193 NT_023838 NT_008104 NT_034901
NT_033185 NT_027068 NT_030032 NT_033192 NT_008127 NT_023684 NT_031818


  NT_023666
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666AC090197228530981RH406178102.30    1 AC090197.8, AF279339.2
S/G/Y/R/B/O NT_023666AC090197228892491RH75939899.08    1 AC090197.8, AF279339.2
S/G/Y/R/B/O NT_023666AC104561230193153RH622268103.34  8102.102 AC023579.2, AC104561.3, AL356861.11
S/G/Y/R/B/O NT_023666AC104561230193153RH32462  81123.00  2 AC023579.2, AC104561.3, AL356861.11
S/G/Y/R/B/O NT_023666AC104561230431823RH40510895.20    1 AC104561.3, AF191252.3
S/G/Y/R/B/O NT_023666AC104561230713113RH623638102.79  8102.101 AC104561.3, AF216674.3
S/G/Y/R/B/O NT_023666AC104561230801673RH42835  81127.00  1 AC104561.3, AF191252.3, AF216674.3
S/G/Y/R/B/O NT_023666AC104561230846523RH62523899.72  8104.501 AC104561.3, AF191252.3, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231217743RH80596898.87    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231279673RH17264897.63    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231279873RH128808102.25    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231376343RH104237899.29    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231415093RH16282898.55    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231552233RH624508101.82  8102.101 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231552233RH33021  81114.00  1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231553983RH16405898.26    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231564923RH13816  81114.00  1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231568953RH165058102.79    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231580143RH16493898.58    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231615553RH62353898.77  8103.301 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231615553RH33113  81114.00  1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231617683RH625948103.34  8102.101 AC022597.6, AC051642.5
S/G/Y/R/B/O NT_023666AC051642231620423TIGR-A003P18    8103.301 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231620423RH62491893.08    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231624903RH404978100.31    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231653573RH405998100.53    1 AC022597.6, AC051642.5, AF216674.3
S/G/Y/R/B/O NT_023666AC051642231977973WI-961    8102.101 AC022597.6, AC051642.5
S/G/Y/R/B/O NT_023666AC051642232693223RH94244898.55    1 AC012574.7, AC022597.6, AC051642.5
S/G/Y/R/B/O NT_023666AC012574232993993RH62275899.29  8104.501 AC012574.7, AC022597.6
S/G/Y/R/B/O NT_023666AC012119234320473RH621948102.79  8102.101 AC012119.7
S/G/Y/R/B/O NT_023666AC012119234321883RH18022897.73    1 AC012119.7
S/G/Y/R/B/O NT_023666AC012119234336563RH714098102.79    1 AC012119.7
S/G/Y/R/B/O NT_023666AC012119234439073RH705078100.31    1 AC012119.7
S/G/Y/R/B/O NT_023666AC091194234893793          
S/G/Y/R/B/O NT_023666AC023202236170081          
S/G/Y/R/B/O NT_023666AC044891237373783          
S/G/Y/R/B/O NT_023666AC120193239446462RH912888102.14    1 AC011817.4, AC120193.3
S/G/Y/R/B/O NT_023666AC024958239556573          
S/G/Y/R/B/O NT_023666AC018422241461903          
S/G/Y/R/B/O NT_023666AC084091242390543          
S/G/Y/R/B/O NT_023666AF106564244547003RH478538104.20    1 AC021000.9, AC105359.3, AF106564.1
S/G/Y/R/B/O NT_023666AF106564244697563RH984718101.18    1 AC021000.9, AC105359.3, AF106564.1, AF260013.3
S/G/Y/R/B/O NT_023666AF106564244935173WI-5833    8104.501 AC021000.9, AC084126.1, AC084126.1, AC105359.3, AF106564.1, AF260013.3
S/G/Y/R/B/O NT_023666AF106564244996333RH255548103.76    1 AC021000.9, AC105359.3, AF106564.1, AF260013.3
S/G/Y/R/B/O NT_023666AC105359245415083RH621538104.20  8104.502 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AC105359245429643RH751688103.60    2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AC105359245429913RH711708103.98    2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AC105359245472593RH622118103.34  8104.502 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AC105359245477183RH13793  81309.00  2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AF260013245653361          


  NT_023666 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666AF176680245833231RH13793  81309.00  2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AF176680245835231RH622118103.34  8104.502 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AF176680245880081RH751688103.60    2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AF176680245880101RH711708103.98    2 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AF176680245893621RH621538104.20  8104.502 AC105359.3, AC107373.4, AF176680.4, AF260013.3
S/G/Y/R/B/O NT_023666AC073581246286303WI-3922    8104.501 AC073581.23, AC107373.4, AF176680.4
S/G/Y/R/B/O NT_023666AC073581247078053RH31049  81196.00  1 AC073581.23, AF267908.3
S/G/Y/R/B/O NT_023666AC041005248249273RH664348104.20    1 AC041005.20
S/G/Y/R/B/O NT_023666AC091185248686593RH31050  81240.00  1 AC041005.20, AC079783.2, AC090104.3, AC091185.6
S/G/Y/R/B/O NT_023666AC091185250449883RH929928104.20    1 AC027630.5, AC079783.2, AC091185.6, AC103779.1, AC103779.1
S/G/Y/R/B/O NT_023666AC091185250449973RH623448104.14  8104.501 AC079783.2, AC091185.6, AC103779.1
S/G/Y/R/B/O NT_023666AC091185250487723RH623338102.14  8104.501 AC027630.5, AC079783.2, AC091185.6, AC103779.1
S/G/Y/R/B/O NT_023666AC091185250487723RH1856  81230.00  1 AC027630.5, AC079783.2, AC091185.6, AC103779.1
S/G/Y/R/B/O NT_023666AC091185250487963RH625988102.1481217.008104.501 AC027630.5, AC079783.2, AC091185.6, AC103779.1
S/G/Y/R/B/O NT_023666AC027630250561791          
S/G/Y/R/B/O NT_023666AF263550251349143RH33737  81255.00  1 AC027630.5, AC103779.1, AC104562.3, AF263550.4
S/G/Y/R/B/O NT_023666AF263550251376363RH623038103.39  8104.501 AC027630.5, AC103779.1, AC104562.3, AF263550.4
S/G/Y/R/B/O NT_023666AF263550251978403RH624558103.39  8104.501 AC104562.3, AF263550.4
S/G/Y/R/B/O NT_023666AC087755252143253          
S/G/Y/R/B/O NT_023666AC009623253174073RH921458103.98    1 AC009623.6
S/G/Y/R/B/O NT_023666AC090103255003843RH406088100.10    1 AC090103.4
S/G/Y/R/B/O NT_023666AC080043255163003          
S/G/Y/R/B/O NT_023666AC023566256777423          
S/G/Y/R/B/O NT_023666AC079097257276121          
S/G/Y/R/B/O NT_023666AC022911258933043RH676948103.01    1 AC022911.6
S/G/Y/R/B/O NT_023666AC011726259758141RH37917  81295.00  1 AC011726.8, AC022911.6
S/G/Y/R/B/O NT_023666AC011726260009411RH622838104.14  8103.701 AC011726.8, AC022911.6
S/G/Y/R/B/O NT_023666AC011726260009481RH762338102.96    1 AC011726.8, AC022911.6
S/G/Y/R/B/O NT_023666AC011726260024401RH1043848104.14    1 AC011726.8, AC022911.6
S/G/Y/R/B/O NT_023666AC011726260028681RH1025718101.88    1 AC011726.8, AC022911.6
S/G/Y/R/B/O NT_023666AC011726260334221RH365188106.43    1 AC011726.8
S/G/Y/R/B/O NT_023666AC011726260411281RH621748103.98  8104.501 AC011726.8
S/G/Y/R/B/O NT_023666AC011726260412771RH8053  81295.00  1 AC011726.8
S/G/Y/R/B/O NT_023666AC011726260434121RH1033808103.98    2 AC011726.8
S/G/Y/R/B/O NT_023666AC011726260434681RH367688105.90    2 AC011726.8, AC095351.5, U69570.1
S/G/Y/R/B/O NT_023666AC015743260968813RH750968101.07    1 AC011726.8, AC015743.9
S/G/Y/R/B/O NT_023666AC015743260968823RH364668106.15    1 AC011726.8, AC015743.9
S/G/Y/R/B/O NT_023666AC015743261350833RH809438102.90    1 AC015743.9
S/G/Y/R/B/O NT_023666AC015743261350893RH38058  81306.00  1 AC015743.9
S/G/Y/R/B/O NT_023666AC015743261351633RH74599  81313.00  1 AC015743.9
S/G/Y/R/B/O NT_023666AC015564262866071RH405668105.28    1 AC015564.11
S/G/Y/R/B/O NT_023666AC015564262876801RH284058106.15    1 AC015564.11
S/G/Y/R/B/O NT_023666AC015564262877941RH455428106.15    1  
S/G/Y/R/B/O NT_023666AC015564262880521RH620338105.60  8107.001 AC015564.11
S/G/Y/R/B/O NT_023666AC015564262880841RH99808106.04    1 AC015564.11
S/G/Y/R/B/O NT_023666AC015564262883011RH249448104.14    1 AC015564.11
S/G/Y/R/B/O NT_023666AC091675263783343RH624358103.98  8103.901 AC015564.11, AC025712.4, AC091675.5
S/G/Y/R/B/O NT_023666AC091675263841513RH458598106.15    1 AC015564.11, AC025712.4, AC091675.5
S/G/Y/R/B/O NT_023666AC091675263853983RH624038105.39  8107.001 AC015564.11, AC025712.4, AC091675.5
S/G/Y/R/B/O NT_023666AC091675263865803RH624348105.39  8106.901 AC025712.4, AC091675.5


  NT_023666 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666AC091675263999333RH7797  81319.00  1 AC025712.4, AC091675.5
S/G/Y/R/B/O NT_023666AC022839264590383          
S/G/Y/R/B/O NT_023666AC067904267016461RH783458104.64    2 AC041007.4, AC067904.3, AL391647.16
S/G/Y/R/B/O NT_023666AC090150268743761RH159828108.39    1 AC016756.2, AC087626.3, AC124649.2
S/G/Y/R/B/O NT_023666AC090150268743881RH622518107.07  8108.801 AC016756.2, AC087626.3, AC124649.2
S/G/Y/R/B/O NT_023666AC090150268973531AFM329XH5    X222.004 AL691517.17
S/G/Y/R/B/O NT_023666 - RH1023348101.60    0  
S/G/Y/R/B/O NT_023666 - RH1030978101.39    0  
S/G/Y/R/B/O NT_023666 - RH117738103.98    0  
S/G/Y/R/B/O NT_023666 - RH405558106.86    0  
S/G/Y/R/B/O NT_023666 - RH418608105.82    0  
S/G/Y/R/B/O NT_023666 - RH456068104.20    0 AC023202.6
S/G/Y/R/B/O NT_023666 - RH621688103.76    1 AC084026.11
S/G/Y/R/B/O NT_023666 - RH621718105.18    1 AC026979.8, AC044849.8
S/G/Y/R/B/O NT_023666 - RH623858100.03    0  
S/G/Y/R/B/O NT_023666 - RH626048105.60    1 AC044849.8
S/G/Y/R/B/O NT_023666 - RH753078102.30    0  
S/G/Y/R/B/O NT_023666 - RH915808104.14    0