Home    Genome Browser    BLAT Search    Help
  Chromosome 12 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes

NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009700
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_009700AC067913174888211         0 confirm
S/G/Y/R/B/O NT_009700AC018630174950501         11 confirm
S/G/Y/R/B/O NT_009700AC018630175117181AQ082240-1chr12NT_009700AC006518191138533AQ0822391RP11-55C2
S/G/Y/R/B/O NT_009700AC018630175117661AQ120140-1chr12NT_009700AC006518190507273AQ1199781CTD-3024M5
S/G/Y/R/B/O NT_009700AC018630175162741AQ625630-1chr12NT_009700AC006518190782983AQ6256341CTD-2653K5
S/G/Y/R/B/O NT_009700AC018630192489441AQ7046801chr12NT_009700AC010176212257433AQ709702-1RP11-1090M3
S/G/Y/R/B/O NT_009700AC018630192619091AQ5371221chr12NT_009700AC010176212455303AQ537125-1RP11-319K20
S/G/Y/R/B/O NT_009700AC018630192866501AQ4091441chr12NT_009700AC010176213095223AQ401193-1RP11-642C13
S/G/Y/R/B/O NT_009700AC018630193102051AQ0939321chr12NT_009700AC010176212362223AQ094182-1CTD-3025O1
S/G/Y/R/B/O NT_009700AC018851175564171         0 confirm
S/G/Y/R/B/O NT_009700AC018851193381161B566431chr12NT_009700AC010176213234033AQ224515-1CTD-2007H21
S/G/Y/R/B/O NT_009700AC018851193428091AQ6050211chr12NT_009700AC010176212880243AQ605284-1CTD-2119F15
S/G/Y/R/B/O NT_009700AC087318175830061         8 confirm
S/G/Y/R/B/O NT_009700AC087318175868811AQ541431-1chr12NT_009666AC087241241211073AQ541436-1RP11-359J14
S/G/Y/R/B/O NT_009700AC087318176220991AQ226954-1chr12NT_009666AC053513240682653AQ226872-1CTD-2016P9
S/G/Y/R/B/O NT_009700AC087318176696641AQ103583-1chr12NT_009666AC053513239921173AQ186052-1CTD-3070O16
S/G/Y/R/B/O NT_009700AC007544176835773         12 confirm
S/G/Y/R/B/O NT_009700AC007544176954033AQ735006-1chr12NT_009666AC053513240051563AQ734888-1CTD-3051G14
S/G/Y/R/B/O NT_009700AC007544177069583AQ190718-1chr12NT_009666AC053513239737673AQ190838-1CTD-3231H18
S/G/Y/R/B/O NT_009700AC007544177172563AQ481099-1chr12NT_009666AC053513240053663AQ481100-1RP11-270D6
S/G/Y/R/B/O NT_009700AC007544177189443B76340-1chr12NT_009666AC053513239756203B76339-1RP11-15B10
S/G/Y/R/B/O NT_009700AC007544177694873AQ057972-1chr12NT_009666AC053513240107063AQ057969-1CTD-2342A23
S/G/Y/R/B/O NT_009700AC007671178024083         5 confirm
S/G/Y/R/B/O NT_009700AC007671178413293AQ3776761chr12NT_009700AC092862197278291AQ377678-1RP11-151I8
S/G/Y/R/B/O NT_009700AC007671179006683AQ5243491chr12NT_009700AC084806197981343AQ520823-1RP11-789H6
S/G/Y/R/B/O NT_009700AC007671179441383AQ4791801chr12NT_009700AC084806197913513AQ479183-1RP11-248J19
S/G/Y/R/B/O NT_009700AC007671179476523AQ2292781chr12NT_009700AC008250198392083AQ154550-1CTD-2261H2
S/G/Y/R/B/O NT_009700AC092862179587221         3 confirm
S/G/Y/R/B/O NT_009700AC092862197278291AQ377678-1chr12NT_009700AC007671178413293AQ3776761RP11-151I8
S/G/Y/R/B/O NT_009700AC092822179685171         0 confirm
S/G/Y/R/B/O NT_009700AC092822180016331AQ0886191chr12NT_009700AC008250198701643AQ088459-1CTD-2208H11
S/G/Y/R/B/O NT_009700AC092822180016371AQ6023631chr12NT_009700AC008250198307343AQ602542-1CTD-2114I6
S/G/Y/R/B/O NT_009700AC092821180179841         1 confirm
S/G/Y/R/B/O NT_009700AC092821180180001AQ4517361chr12NT_009702AC00743681316643AQ4529251RP11-760F24
S/G/Y/R/B/O NT_009700AC092821180225051AQ1963901chr12NT_009702AC01017581634283AQ1963921RP11-46F12
S/G/Y/R/B/O NT_009700AC092821180204521AQ0268831chr12NT_033254AC008013317315503AQ0268811CTD-2324M17
S/G/Y/R/B/O NT_009700AC006432180309433         5 confirm
S/G/Y/R/B/O NT_009700AC006432180395683AQ0055981chr12NT_009702AC01017581978333AQ0055931CTD-2296G7
S/G/Y/R/B/O NT_009700AC006432180464113B305971chr12NT_009702AC01017582220293B305981CTC-338N12
S/G/Y/R/B/O NT_009700AC006432181800263AQ3212811chr12NT_009702AC01017582354163AQ3212781RP11-100M3
S/G/Y/R/B/O NT_009700AC006432181416193AQ8770701chr12NT_009702AC00953383100043AQ6049421CTD-2135H4
S/G/Y/R/B/O NT_009700AC006432180655403AQ208439-1chr12NT_009702AC00953383313333AQ1772161CTD-3230M23
S/G/Y/R/B/O NT_009700AC006432180752183AQ042887-1chr12NT_009702AC00953383764203AQ0428861CTD-2318O12
S/G/Y/R/B/O NT_009700AC006432180389343AQ604942-1chr12NT_033254AC024940318951483AQ877070-1CTD-2135H4
S/G/Y/R/B/O NT_009700AC006432180502453AQ110243-1chr12NT_033254AC024940319379513AQ110241-1CTD-2376E21
S/G/Y/R/B/O NT_009700AC006432180655463AQ438582-1chr12NT_033254AC024940319721003AQ440668-1RP11-690D7
S/G/Y/R/B/O NT_009700AC006432180704233B315461chr12NT_033254AC010198316164063B315451CTC-786A14
S/G/Y/R/B/O NT_009700AC006432180943693AQ1102411chr12NT_033254AC008013318177953AQ1102431CTD-2376E21
S/G/Y/R/B/O NT_009700AC006432181361543B641601chr12NT_033254AC008013318061563AQ2284451CTD-2021H1
S/G/Y/R/B/O NT_009700AC006432181365623AQ417056-1chr12NT_033254AC024940320635253AQ417058-1RP11-177K4


  NT_009700 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_009700AC006432181374343AQ247761-1chr12NT_033254AC024940319799113B70912-1CTD-2063E20
S/G/Y/R/B/O NT_009700AC006432181411163AQ232831-1chr12NT_033254AC024940320392733B74408-1CTD-2028D16
S/G/Y/R/B/O NT_009700AC006432181416193AQ8770701chr12NT_033254AC008013318292193AQ6049421CTD-2135H4
S/G/Y/R/B/O NT_009700AC006432181471883AQ4035541chr12NT_033254AC008013317194933AQ4416651RP11-631H17
S/G/Y/R/B/O NT_009700AC006432181472093AQ308465-1chr12NT_033254AC068793320955501AQ308467-1CTD-2525D6
S/G/Y/R/B/O NT_009700AC006432181637493AQ5646751chr12NT_033254AC008150316883033AQ5992101RP11-937A23
S/G/Y/R/B/O NT_009700AC006432181656793AQ0356711chr12NT_033254AC008013317539163AQ0356741CTD-2320P16
S/G/Y/R/B/O NT_009700AC006432181696323AQ439175-1chr12NT_033254AC024940320923683AQ493566-1RP11-627K11
S/G/Y/R/B/O NT_009700AC006432181870983AQ542328-1chr12NT_033254AC008013318668053AQ5423261RP11-346G18
S/G/Y/R/B/O NT_009700AC010186182116283         9 confirm
S/G/Y/R/B/O NT_009700AC010186182466423AQ169716-1chr12NT_009702AC00953383680273AQ1695211CTD-3168L2
S/G/Y/R/B/O NT_009700AC010186182148163AQ034699-1chr12NT_033254AC008013318546253AQ0346981CTD-2329N11
S/G/Y/R/B/O NT_009700AC010186182769953AQ749413-1chr12NT_033254AC008010318883143AQ748668-1RP11-1149K7
S/G/Y/R/B/O NT_009700AC007068182862043         17 confirm
S/G/Y/R/B/O NT_009700AC007068182906803AQ426371-1chr12NT_033254AC008013318667893AQ3921601CTD-2555M18
S/G/Y/R/B/O NT_009700AC007068183063603AQ262378-1chr12NT_033254AC008013318507813AQ262380-1CTD-2508B6
S/G/Y/R/B/O NT_009700AC007068183182583AQ612941-1chr12NT_033254AC024940318995783AQ612716-1RP11-705C15
S/G/Y/R/B/O NT_009700AC007068183448563AQ343255-1chr12NT_033254AC008010318727543AQ343258-1RP11-113F24
S/G/Y/R/B/O NT_009700AC007068183063603AQ262378-1chr12NT_009702AC00953383310173AQ262380-1CTD-2508B6
S/G/Y/R/B/O NT_009700AC091814184646023         20 confirm
S/G/Y/R/B/O NT_009700AC091814185262013AQ5068321chr12NT_009700AC024224193672921AQ506831-1RP11-281L3
S/G/Y/R/B/O NT_009700AC091814185574593AQ3150511chr12NT_009700AC024224194034761AQ282101-1RP11-94B7
S/G/Y/R/B/O NT_009700AC091814185927893AQ2309801chr12NT_009700AC024224194348691AQ243070-1CTD-2037H2
S/G/Y/R/B/O NT_009700AC091814185928443B181671chr12NT_009700AC024224194409061B18166-1CTA-104D8
S/G/Y/R/B/O NT_009700AC091814186105493AQ3509291chr12NT_009700AC115676194663933AQ350928-1RP11-133L14
S/G/Y/R/B/O NT_009700AL137062186115373         1 confirm
S/G/Y/R/B/O NT_009700AL137062186134223AQ7761131chr12NT_009700AC024224194347231AQ823348-1RP11-1147C8
S/G/Y/R/B/O NT_009700AC022547186191381         5 confirm
S/G/Y/R/B/O NT_009700AC022547186433731AQ6053921chr12NT_009700AC024224194455981AQ604866-1CTD-2133J7
S/G/Y/R/B/O NT_009700AC022547186504661B904481chr12NT_009700AC024224194174421AQ129926-1CTD-2165H15
S/G/Y/R/B/O NT_009700AC022547186673441AQ7422541chr12NT_009700AC115676195231133AQ742184-1RP11-959D18
S/G/Y/R/B/O NT_009700AC024224186790141         5 confirm
S/G/Y/R/B/O NT_009700AC024224193672921AQ506831-1chr12NT_009700AC091814185262013AQ5068321RP11-281L3
S/G/Y/R/B/O NT_009700AC024224194034761AQ282101-1chr12NT_009700AC091814185574593AQ3150511RP11-94B7
S/G/Y/R/B/O NT_009700AC024224194348691AQ243070-1chr12NT_009700AC091814185927893AQ2309801CTD-2037H2
S/G/Y/R/B/O NT_009700AC024224194409061B18166-1chr12NT_009700AC091814185928443B181671CTA-104D8
S/G/Y/R/B/O NT_009700AC024224194347231AQ823348-1chr12NT_009700AL137062186134223AQ7761131RP11-1147C8
S/G/Y/R/B/O NT_009700AC024224194455981AQ604866-1chr12NT_009700AC022547186433731AQ6053921CTD-2133J7
S/G/Y/R/B/O NT_009700AC024224194174421AQ129926-1chr12NT_009700AC022547186504661B904481CTD-2165H15
S/G/Y/R/B/O NT_009700AC068775186888281         8 confirm
S/G/Y/R/B/O NT_009700AC068775186972531AQ543843-1chr12NT_009700AC022075195583133AQ5438421RP11-349G24
S/G/Y/R/B/O NT_009700AC068775186972921AQ543841-1chr12NT_009700AC022075195583203AQ5438401RP11-349G22
S/G/Y/R/B/O NT_009700AC068775187117581AQ386273-1chr12NT_009700AC022075195781053AQ3862741RP11-134I17
S/G/Y/R/B/O NT_009700AC068775187118051AQ386229-1chr12NT_009700AC022075195781053AQ3862301RP11-134G17
S/G/Y/R/B/O NT_009700AC068775187215981AQ021979-1chr12NT_009700AC022075196589833AQ0219811CTD-2304N21
S/G/Y/R/B/O NT_009700AC068775187221581AQ486277-1chr12NT_009700AC022075195766333AQ4862801RP11-265L13
S/G/Y/R/B/O NT_009700AC068775187550371AQ312671-1chr12NT_009700AC022075195995993AQ3126811RP11-93L6
S/G/Y/R/B/O NT_009700AC068775188175161AQ455996-1chr12NT_009700AC022075196636023AQ4506311RP11-737G14
S/G/Y/R/B/O NT_009700AC021049188180543         15 confirm
S/G/Y/R/B/O NT_009700AC021049188179193AQ520085-1chr12NT_009700AC022075196755923AQ5220951RP11-770I21


  NT_009700 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_009700AC021049188191423AQ263696-1chr12NT_009700AC022075196348613AQ2760341CTD-2514N22
S/G/Y/R/B/O NT_009700AC016145189933693         9 confirm
S/G/Y/R/B/O NT_009700AC006518190450933         18 confirm
S/G/Y/R/B/O NT_009700AC006518191138533AQ0822391chr12NT_009700AC018630175117181AQ082240-1RP11-55C2
S/G/Y/R/B/O NT_009700AC006518190507273AQ1199781chr12NT_009700AC018630175117661AQ120140-1CTD-3024M5
S/G/Y/R/B/O NT_009700AC006518190782983AQ6256341chr12NT_009700AC018630175162741AQ625630-1CTD-2653K5
S/G/Y/R/B/O NT_009700AC006510193891161         1 confirm
S/G/Y/R/B/O NT_009700AC115676194494063         8 confirm
S/G/Y/R/B/O NT_009700AC115676194663933AQ350928-1chr12NT_009700AC091814186105493AQ3509291RP11-133L14
S/G/Y/R/B/O NT_009700AC115676195231133AQ742184-1chr12NT_009700AC022547186673441AQ7422541RP11-959D18
S/G/Y/R/B/O NT_009700AC022075195274063         9 confirm
S/G/Y/R/B/O NT_009700AC022075195583133AQ5438421chr12NT_009700AC068775186972531AQ543843-1RP11-349G24
S/G/Y/R/B/O NT_009700AC022075195583203AQ5438401chr12NT_009700AC068775186972921AQ543841-1RP11-349G22
S/G/Y/R/B/O NT_009700AC022075195781053AQ3862741chr12NT_009700AC068775187117581AQ386273-1RP11-134I17
S/G/Y/R/B/O NT_009700AC022075195781053AQ3862301chr12NT_009700AC068775187118051AQ386229-1RP11-134G17
S/G/Y/R/B/O NT_009700AC022075196589833AQ0219811chr12NT_009700AC068775187215981AQ021979-1CTD-2304N21
S/G/Y/R/B/O NT_009700AC022075195766333AQ4862801chr12NT_009700AC068775187221581AQ486277-1RP11-265L13
S/G/Y/R/B/O NT_009700AC022075195995993AQ3126811chr12NT_009700AC068775187550371AQ312671-1RP11-93L6
S/G/Y/R/B/O NT_009700AC022075196636023AQ4506311chr12NT_009700AC068775188175161AQ455996-1RP11-737G14
S/G/Y/R/B/O NT_009700AC022075196755923AQ5220951chr12NT_009700AC021049188179193AQ520085-1RP11-770I21
S/G/Y/R/B/O NT_009700AC022075196348613AQ2760341chr12NT_009700AC021049188191423AQ263696-1CTD-2514N22
S/G/Y/R/B/O NT_009700AC084806197330043         3 confirm
S/G/Y/R/B/O NT_009700AC084806197981343AQ520823-1chr12NT_009700AC007671179006683AQ5243491RP11-789H6
S/G/Y/R/B/O NT_009700AC084806197913513AQ479183-1chr12NT_009700AC007671179441383AQ4791801RP11-248J19
S/G/Y/R/B/O NT_009700AC008250197987153         17 confirm
S/G/Y/R/B/O NT_009700AC008250198392083AQ154550-1chr12NT_009700AC007671179476523AQ2292781CTD-2261H2
S/G/Y/R/B/O NT_009700AC008250198701643AQ088459-1chr12NT_009700AC092822180016331AQ0886191CTD-2208H11
S/G/Y/R/B/O NT_009700AC008250198307343AQ602542-1chr12NT_009700AC092822180016371AQ6023631CTD-2114I6
S/G/Y/R/B/O NT_009700AC010185199385093         11 confirm
S/G/Y/R/B/O NT_009700AC010197199757193         22 confirm
S/G/Y/R/B/O NT_009700AC022072201247543         10 confirm
S/G/Y/R/B/O NT_009700AC006559201683043         26 confirm
S/G/Y/R/B/O NT_009700AC022224203475433         21 confirm
S/G/Y/R/B/O NT_009700AC022335204568283         22 confirm
S/G/Y/R/B/O NT_009700AC087309206087141         14 confirm
S/G/Y/R/B/O NT_009700AC026871206338521         7 confirm
S/G/Y/R/B/O NT_009700AC011604207802793         9 confirm
S/G/Y/R/B/O NT_009700AC092491209011111         14 confirm
S/G/Y/R/B/O NT_009700AC064821210740141         0 confirm
S/G/Y/R/B/O NT_009700AC112777210774471         4 confirm
S/G/Y/R/B/O NT_009700AC010176212147063         3 confirm
S/G/Y/R/B/O NT_009700AC010176212257433AQ709702-1chr12NT_009700AC018630192489441AQ7046801RP11-1090M3
S/G/Y/R/B/O NT_009700AC010176212455303AQ537125-1chr12NT_009700AC018630192619091AQ5371221RP11-319K20
S/G/Y/R/B/O NT_009700AC010176213095223AQ401193-1chr12NT_009700AC018630192866501AQ4091441RP11-642C13
S/G/Y/R/B/O NT_009700AC010176212362223AQ094182-1chr12NT_009700AC018630193102051AQ0939321CTD-3025O1
S/G/Y/R/B/O NT_009700AC010176213234033AQ224515-1chr12NT_009700AC018851193381161B566431CTD-2007H21
S/G/Y/R/B/O NT_009700AC010176212880243AQ605284-1chr12NT_009700AC018851193428091AQ6050211CTD-2119F15
S/G/Y/R/B/O NT_009700AC078950214168093         4 confirm
S/G/Y/R/B/O NT_009700AC007450214853663         5 confirm
S/G/Y/R/B/O NT_009700AC084430216957973         2 confirm


  NT_009700 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_009700AC084358217658163         8 confirm
S/G/Y/R/B/O NT_009700AC091816219337663         10 confirm
S/G/Y/R/B/O NT_009700AC007537220314253         15 confirm
S/G/Y/R/B/O NT_009700AC007537222152263AQ0283151chr12NT_009714AC007619130183413AQ040418-1CTD-2325J12
S/G/Y/R/B/O NT_009700AC007621222220751         5 confirm
S/G/Y/R/B/O NT_009700AC007621222422831AQ4295441chr12NT_009714AC007619130501423AQ429540-1CTD-2574O16
S/G/Y/R/B/O NT_009700AC007621222497511AQ4787811chr12NT_009714AC007619130607743AQ478782-1RP11-272M3
S/G/Y/R/B/O NT_009700AC007621222497491AQ1827631chr12NT_009714AC007619130609993AQ152374-1CTD-3115I13
S/G/Y/R/B/O NT_009700AC007621223276441AQ714129-1chr12NT_009714AC007619131046443AQ713862-1CTD-2129J15
S/G/Y/R/B/O NT_009700AC007621223910061AQ7509301chr12NT_009714AC007619131084693AQ750392-1RP11-1150D7
S/G/Y/R/B/O NT_009700AC007621223763081AQ820119-1chr12NT_009714AC007619131223583AQ800735-1RP11-875A18
S/G/Y/R/B/O NT_009700AC007621223455401AQ707506-1chr12NT_009714AC007619131251443AQ721345-1RP11-1133P21
S/G/Y/R/B/O NT_009700AC022222222894061         0 confirm