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Chromosome 18 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_025028
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025028AC105243734448772        
S/G/Y/R/B/O NT_025028AP001833734479091        
S/G/Y/R/B/O NT_025028AC105216735182313        
S/G/Y/R/B/O NT_025028AC090226737993432AFM116YG1118109.0018109.181AC079070, AC079070, AC090226, AP001840
S/G/Y/R/B/O NT_025028AC079070738131513        
S/G/Y/R/B/O NT_025028AC010947740037573GATA52A09  18109.181 AC010947
S/G/Y/R/B/O NT_025028AC090125741370062GATA8C07  18111.201AP001842, AP001842
S/G/Y/R/B/O NT_025028AP001842742464661        
S/G/Y/R/B/O NT_025028AC084702742892653        
S/G/Y/R/B/O NT_025028AC090398744341222AFM333WD518109.1018111.201AC008021, AP001850, AC008021, AC090398, AP001405, AP001638, AP001850, AP002442
S/G/Y/R/B/O NT_025028AC008021745397311AFM164XE318109.1018111.201AP001850, AC008021, AP001850
S/G/Y/R/B/O NT_025028AP001850744955091        
S/G/Y/R/B/O NT_025028AC009704745713303        
S/G/Y/R/B/O NT_025028 - GATA51E05  18109.180AP001833, AP001833