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  Chromosome 8 - Genetic Maps - Single Contig
 

Chromosome 8 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_008046
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AC009627925608981        
S/G/Y/R/B/O NT_008046AC026572925789831        
S/G/Y/R/B/O NT_008046AC024026925847261        
S/G/Y/R/B/O NT_008046AC024041925938581        
S/G/Y/R/B/O NT_008046AC027242926924292        
S/G/Y/R/B/O NT_008046AC022825929035622AFM094VB78102.108103.691AC016885, AC016885, AC022825
S/G/Y/R/B/O NT_008046AC016885929145182        
S/G/Y/R/B/O NT_008046AC023125929436511        
S/G/Y/R/B/O NT_008046AC024738930714001        
S/G/Y/R/B/O NT_008046AC011118930812403        
S/G/Y/R/B/O NT_008046AC090687932119202        
S/G/Y/R/B/O NT_008046AF172274933626551        
S/G/Y/R/B/O NT_008046AC010834934231841        
S/G/Y/R/B/O NT_008046AP004282935848303        
S/G/Y/R/B/O NT_008046AP003351937439013        
S/G/Y/R/B/O NT_008046AP003478939207553        
S/G/Y/R/B/O NT_008046AP003534940489093        
S/G/Y/R/B/O NT_008046AP003690942088223        
S/G/Y/R/B/O NT_008046AP004218943439863AFM281VD58105.408106.901AC108860, AC016495, AC023632, AC108860, AP004218
S/G/Y/R/B/O NT_008046AC009692944270131        
S/G/Y/R/B/O NT_008046AC013693944276451        
S/G/Y/R/B/O NT_008046AC108860944630412        
S/G/Y/R/B/O NT_008046AC084253945118441        
S/G/Y/R/B/O NT_008046AC105328945417352        
S/G/Y/R/B/O NT_008046AC025733945690511        
S/G/Y/R/B/O NT_008046AC106856945845082        
S/G/Y/R/B/O NT_008046AC090802947446953        
S/G/Y/R/B/O NT_008046AC015561948839691        
S/G/Y/R/B/O NT_008046AC018525949597761        
S/G/Y/R/B/O NT_008046AP003692950620823        
S/G/Y/R/B/O NT_008046AC087752951616233        
S/G/Y/R/B/O NT_008046AP003552953235913AFMA114XC98105.308106.901 AC068189, AP003552
S/G/Y/R/B/O NT_008046AC018801954149913AFM198VH68105.408106.901 AC013780, AC018801, AC068189
S/G/Y/R/B/O NT_008046AP003466955181143        
S/G/Y/R/B/O NT_008046AC024995956179383        
S/G/Y/R/B/O NT_008046AC083836957618822        
S/G/Y/R/B/O NT_008046AC026561958060691        
S/G/Y/R/B/O NT_008046AP004287959236153        
S/G/Y/R/B/O NT_008046AP004389960137643AFMB281ZF18106.408107.971 AC016285, AC023373
S/G/Y/R/B/O NT_008046AP004389960409463AFMA052WH18106.508107.971 AC016285, AC023373
S/G/Y/R/B/O NT_008046AC068102960758653        
S/G/Y/R/B/O NT_008046AC012339961864683        
S/G/Y/R/B/O NT_008046AC007992963662863        
S/G/Y/R/B/O NT_008046AP003465966034553AFMB320WG98106.408107.971 AC068091, AP003465
S/G/Y/R/B/O NT_008046AP003548966722053        
S/G/Y/R/B/O NT_008046AP003477968440483UT631  8107.971 AC012214, AC016250, AP003477
S/G/Y/R/B/O NT_008046AC010859970187592        
S/G/Y/R/B/O NT_008046AP003112971895683        
S/G/Y/R/B/O NT_008046AP003111973316233        
S/G/Y/R/B/O NT_008046AP003117974354083        


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AP003115975905393GATA23D12  8110.201 AP003115
S/G/Y/R/B/O NT_008046AP003113976014693        
S/G/Y/R/B/O NT_008046AP003116977529923        
S/G/Y/R/B/O NT_008046AP002982978135053        
S/G/Y/R/B/O NT_008046AP003114979734763        
S/G/Y/R/B/O NT_008046AP003357980054433        
S/G/Y/R/B/O NT_008046AP002906981714203        
S/G/Y/R/B/O NT_008046AP003352983165813        
S/G/Y/R/B/O NT_008046AP003439984823833AFMB327YH18108.808110.201 AC018790, AC021923, AP003439
S/G/Y/R/B/O NT_008046AP003439985041193GAAT1A4  8110.201 AC018790, AC021923
S/G/Y/R/B/O NT_008046AP003439985597723AFM200WB68108.808110.201 AC018790, AP003439
S/G/Y/R/B/O NT_008046AP003438986966823AFM077YA58110.308111.681 AP003438
S/G/Y/R/B/O NT_008046AP003355987163673        
S/G/Y/R/B/O NT_008046AP002087988510443        
S/G/Y/R/B/O NT_008046AP003467989307233        
S/G/Y/R/B/O NT_008046AP003551990656353        
S/G/Y/R/B/O NT_008046AP003691992409313AFMB019YG18110.308111.681AC104986, AC104986, AP003691
S/G/Y/R/B/O NT_008046AC104986992703002        
S/G/Y/R/B/O NT_008046AP004294993417573        
S/G/Y/R/B/O NT_008046AP004709994527653        
S/G/Y/R/B/O NT_008046AP004290994666103        
S/G/Y/R/B/O NT_008046AP004289995798113        
S/G/Y/R/B/O NT_008046AC026827997220623        
S/G/Y/R/B/O NT_008046AC023933998831183        
S/G/Y/R/B/O NT_008046AC018442999836752AFM270YB18111.108112.421 AC018442, AP001573
S/G/Y/R/B/O NT_008046AP0034731001528973        
S/G/Y/R/B/O NT_008046AC1100121002897832AFM287WA58102.108103.691 AC110012
S/G/Y/R/B/O NT_008046AC0260891003057611        
S/G/Y/R/B/O NT_008046AC0905781003097331        
S/G/Y/R/B/O NT_008046AC0790631005147301        
S/G/Y/R/B/O NT_008046AC0901461005288481        
S/G/Y/R/B/O NT_008046AC0911841006292012        
S/G/Y/R/B/O NT_008046AC0186761007720683        
S/G/Y/R/B/O NT_008046AC1050261009236843        
S/G/Y/R/B/O NT_008046AC0224851010285091        
S/G/Y/R/B/O NT_008046AC0320021010722313        
S/G/Y/R/B/O NT_008046AC0050661012369473AFM179YF6  8102.621 AC005066
S/G/Y/R/B/O NT_008046AC0050661012369473AFM179YF68101.00  1 AC005066
S/G/Y/R/B/O NT_008046AC0374501013200183        
S/G/Y/R/B/O NT_008046AC0905751014592253        
S/G/Y/R/B/O NT_008046AC0909801015061742        
S/G/Y/R/B/O NT_008046AC0907971016573393        
S/G/Y/R/B/O NT_008046AC0272591017323743        
S/G/Y/R/B/O NT_008046AC0905681018187003        
S/G/Y/R/B/O NT_008046AC0240631019773591        
S/G/Y/R/B/O NT_008046AC0693531019913013        
S/G/Y/R/B/O NT_008046AF1178291023740033MFD45A  8102.621 AF117829
S/G/Y/R/B/O NT_008046AC0741781024683093        
S/G/Y/R/B/O NT_008046AC0046121025116973        
S/G/Y/R/B/O NT_008046AF0688621025997923        


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AF0707171026321553        
S/G/Y/R/B/O NT_008046AC0040831027577713AFM355TF58102.108103.691 AC004083, AF049895
S/G/Y/R/B/O NT_008046AC0799671028740933        
S/G/Y/R/B/O NT_008046AC0227211029795791        
S/G/Y/R/B/O NT_008046AC0410391031250012AFMB311YH98116.808118.151 AC090466
S/G/Y/R/B/O NT_008046AC0410391031395842AFMA119XB58116.808118.151 AC041039, AC090466
S/G/Y/R/B/O NT_008046AC0215461032366152        
S/G/Y/R/B/O NT_008046AC0901421033782361AFM343XA58116.808118.151AC021546, AC021546, AC090142
S/G/Y/R/B/O NT_008046AC0901421033852341AFMB340XF58116.808118.151AC021546, AC021546, AC069127, AC090142
S/G/Y/R/B/O NT_008046AC0214981036176733AFMA090YG58116.308117.621 AC021498, AP004711
S/G/Y/R/B/O NT_008046AP0047151036797953        
S/G/Y/R/B/O NT_008046AP0047161037547983AFMA045YG58116.308117.621 AC012564, AP004716
S/G/Y/R/B/O NT_008046AC0873701038345221        
S/G/Y/R/B/O NT_008046AP0045821039228173        
S/G/Y/R/B/O NT_008046AP0028471039648503        
S/G/Y/R/B/O NT_008046AP0034711040751933ATA36C08  8117.621AC021413, AP002847, AC021413, AC055117, AP002847, AP003471
S/G/Y/R/B/O NT_008046AP0034711040944053AFMA344ZC18116.308117.621 AC055117
S/G/Y/R/B/O NT_008046AP0028491041675023        
S/G/Y/R/B/O NT_008046AP0047121043734923        
S/G/Y/R/B/O NT_008046AP0047141044440973        
S/G/Y/R/B/O NT_008046AP0015721044745333        
S/G/Y/R/B/O NT_008046AC0258361046247942AFM154XE78116.308117.621AP001572, AC025836, AP001572
S/G/Y/R/B/O NT_008046AC0906861046286623        
S/G/Y/R/B/O NT_008046AC0077511047829083        
S/G/Y/R/B/O NT_008046AC0904481049257223        
S/G/Y/R/B/O NT_008046AC0122131049578043        
S/G/Y/R/B/O NT_008046AC0693511051289923UT1208  8118.151 AC069351, AP004221
S/G/Y/R/B/O NT_008046AC0253701051388233        
S/G/Y/R/B/O NT_008046AP0035501053294813        
S/G/Y/R/B/O NT_008046AP0036981054698313        
S/G/Y/R/B/O NT_008046AP0033541054715643        
S/G/Y/R/B/O NT_008046AP0036961056198513        
S/G/Y/R/B/O NT_008046AP0033561056261073        
S/G/Y/R/B/O NT_008046AP0028511057754533AFMA073ZG58116.308117.621 AP002851
S/G/Y/R/B/O NT_008046AP0028511057963333AFM192XC58116.308117.621 AC011777, AP002851
S/G/Y/R/B/O NT_008046AP0028521059234343UT7815  8117.621AP002851, AC091767, AP002851, AP002852
S/G/Y/R/B/O NT_008046AP0028521060431693AFM294WE98116.308117.621 AP002852
S/G/Y/R/B/O NT_008046AP0029811060444693        
S/G/Y/R/B/O NT_008046AP0029071062000283        
S/G/Y/R/B/O NT_008046AP0013281062664093        
S/G/Y/R/B/O NT_008046AP0015751064216243UT6744  8117.621 AP000782, AP001575
S/G/Y/R/B/O NT_008046AP0012061064670553        
S/G/Y/R/B/O NT_008046AP0013291066238973        
S/G/Y/R/B/O NT_008046AP0004261066992783        
S/G/Y/R/B/O NT_008046AP0012071068980593        
S/G/Y/R/B/O NT_008046AP0012081070372673        
S/G/Y/R/B/O NT_008046AP0013301071825053AFM078ZA98114.808116.141AP001208, AC011028, AP001208, AP001330
S/G/Y/R/B/O NT_008046AP0034691072728023        
S/G/Y/R/B/O NT_008046AP0036891073791713AFMA184ZG58114.808117.621AP003469, AP003469, AP003689
S/G/Y/R/B/O NT_008046AP0042931075198483        


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AP0041951076202523        
S/G/Y/R/B/O NT_008046AP0012051077290863        
S/G/Y/R/B/O NT_008046AP0004241078675313        
S/G/Y/R/B/O NT_008046AP0034721080271533AFMB307XB58111.808112.421AP000424, AP000424, AP003472
S/G/Y/R/B/O NT_008046AP0034721080514883AFM295XH58111.808113.161 AP003472
S/G/Y/R/B/O NT_008046AP0034721080649533AFM333VB98111.808113.161 AP003472
S/G/Y/R/B/O NT_008046AP0034721080790113AFM352TD98111.008112.421 AF235095, AP003472
S/G/Y/R/B/O NT_008046AP0015741081004303        
S/G/Y/R/B/O NT_008046AC0256471082143582        
S/G/Y/R/B/O NT_008046AC0215901083271542