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  Chromosome Y - Genetic Maps - Single Contig
 

Chromosome Y - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011896 NT_011878 NT_011875 NT_011903 NT_025975 NT_025441


  NT_011875
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011875AC011293132648003ATA5E03  1274.531 AC011293, AL590679
S/G/Y/R/B/O NT_011875AC012502132688543        
S/G/Y/R/B/O NT_011875AC011302133824533        
S/G/Y/R/B/O NT_011875AC013735135603903        
S/G/Y/R/B/O NT_011875AC004772136393413        
S/G/Y/R/B/O NT_011875AC005942137123203        
S/G/Y/R/B/O NT_011875AC002992137367783        
S/G/Y/R/B/O NT_011875AC004617138896263        
S/G/Y/R/B/O NT_011875AC004810140356473        
S/G/Y/R/B/O NT_011875AC002531141201453        
S/G/Y/R/B/O NT_011875AC004474143160453        
S/G/Y/R/B/O NT_011875AC006565144201313        
S/G/Y/R/B/O NT_011875AC005820144650103        
S/G/Y/R/B/O NT_011875AC010877146239193        
S/G/Y/R/B/O NT_011875AC006376147609483        
S/G/Y/R/B/O NT_011875AC007004149327553        
S/G/Y/R/B/O NT_011875AC006383149685153        
S/G/Y/R/B/O NT_011875AC006371150735253        
S/G/Y/R/B/O NT_011875AC006370152756793        
S/G/Y/R/B/O NT_011875AC018677154486253        
S/G/Y/R/B/O NT_011875AC010720155515333        
S/G/Y/R/B/O NT_011875AC010723155882773        
S/G/Y/R/B/O NT_011875AC019191157624973        
S/G/Y/R/B/O NT_011875AC010726157906413        
S/G/Y/R/B/O NT_011875AC010979159669653        
S/G/Y/R/B/O NT_011875AC010879160761593        
S/G/Y/R/B/O NT_011875AC017032162578803        
S/G/Y/R/B/O NT_011875AC006989163028033        
S/G/Y/R/B/O NT_011875AC011289164602693        
S/G/Y/R/B/O NT_011875AC010972165406063        
S/G/Y/R/B/O NT_011875AC007007166550433        
S/G/Y/R/B/O NT_011875AC006998167126623        
S/G/Y/R/B/O NT_011875AC006382168567223        
S/G/Y/R/B/O NT_011875AC006462170719213GATA6B08  X15.661 AC006462, AC084792
S/G/Y/R/B/O NT_011875AC006336171591263        
S/G/Y/R/B/O NT_011875AC016671172548823        
S/G/Y/R/B/O NT_011875AC017020172741193        
S/G/Y/R/B/O NT_011875AC011749174495993IFNAR  2131.262 AC010131, AC011749, AC080189
S/G/Y/R/B/O NT_011875AC053516176451753        
S/G/Y/R/B/O NT_011875AC010135176722893        
S/G/Y/R/B/O NT_011875AC010128178490403        
S/G/Y/R/B/O NT_011875AC011751179116263        
S/G/Y/R/B/O NT_011875AC016678180911413        
S/G/Y/R/B/O NT_011875AC015979182339233        
S/G/Y/R/B/O NT_011875AC007034182559353        
S/G/Y/R/B/O NT_011875AC007043184049333        
S/G/Y/R/B/O NT_011875AC006999185121353        
S/G/Y/R/B/O NT_011875AC007042186248133        
S/G/Y/R/B/O NT_011875AC091329186315203        
S/G/Y/R/B/O NT_011875AC007972186687653        


  NT_011875 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011875AC015978187968543        
S/G/Y/R/B/O NT_011875AC068704189754343        
S/G/Y/R/B/O NT_011875AC007742189902363        
S/G/Y/R/B/O NT_011875AC095381191892103        
S/G/Y/R/B/O NT_011875AC009976192195213        
S/G/Y/R/B/O NT_011875AC095380193985753        
S/G/Y/R/B/O NT_011875AC024183194438043        
S/G/Y/R/B/O NT_011875AC007241196072933        
S/G/Y/R/B/O NT_011875AC069130197689613        
S/G/Y/R/B/O NT_011875AC073962198356353        
S/G/Y/R/B/O NT_011875AC068541198421493        
S/G/Y/R/B/O NT_011875AC022486198795153        
S/G/Y/R/B/O NT_011875AC007379200356723        
S/G/Y/R/B/O NT_011875AC009235202095543        
S/G/Y/R/B/O NT_011875AC007244203692643        
S/G/Y/R/B/O NT_011875AC021210205540413        
S/G/Y/R/B/O NT_011875AC010133206173003        
S/G/Y/R/B/O NT_011875AC012062207691743        
S/G/Y/R/B/O NT_011875AC010137208113693        
S/G/Y/R/B/O NT_011875AC009977209348703        
S/G/Y/R/B/O NT_011875AC010889209663413        
S/G/Y/R/B/O NT_011875AC010151211462653        
S/G/Y/R/B/O NT_011875AC009233212178863        
S/G/Y/R/B/O NT_011875AC079157214131253        
S/G/Y/R/B/O NT_011875AC079261215241593        
S/G/Y/R/B/O NT_011875AC079156215743693        
S/G/Y/R/B/O NT_011875AC024250215917543        
S/G/Y/R/B/O NT_011875AC009240216352773        
S/G/Y/R/B/O NT_011875AC011745217363673        
S/G/Y/R/B/O NT_011875AC007678218856923        
S/G/Y/R/B/O NT_011875AC009494219946653        
S/G/Y/R/B/O NT_011875AC026061221827793        
S/G/Y/R/B/O NT_011875AC009489222021213        
S/G/Y/R/B/O NT_011875AC007876223028743        
S/G/Y/R/B/O NT_011875AC009239224675533        
S/G/Y/R/B/O NT_011875AC010086226037243        
S/G/Y/R/B/O NT_011875AC010141227744593        
S/G/Y/R/B/O NT_011875AC021107228955173