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  Chromosome 14 - YAC Map - Single Contig
 

Chromosome 14 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_010164 NT_029439 NT_025892 NT_030826 NT_033264 NT_026437 NT_033262 NT_010019
NT_033263 NT_010168


  NT_025892
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025892AC013571401026511      
S/G/Y/R/B/O NT_025892AC023529401127641      
S/G/Y/R/B/O NT_025892AC023859401190861      
S/G/Y/R/B/O NT_025892AL355839401214582      
S/G/Y/R/B/O NT_025892AL391397402546493      
S/G/Y/R/B/O NT_025892AL583864404202713      
S/G/Y/R/B/O NT_025892AL445074404220643      
S/G/Y/R/B/O NT_025892AL450442405648023      
S/G/Y/R/B/O NT_025892AL442163407008863      
S/G/Y/R/B/O NT_025892AL389914408454342      
S/G/Y/R/B/O NT_025892AL356800409208503      
S/G/Y/R/B/O NT_025892AL163153410689913      
S/G/Y/R/B/O NT_025892AL390097412154122      
S/G/Y/R/B/O NT_025892AL445383413011263      
S/G/Y/R/B/O NT_025892AL583809414470613      
S/G/Y/R/B/O NT_025892AL442183416680942WI-56691484.001AL358913, AC025309, AL358913, AL442183
S/G/Y/R/B/O NT_025892AL358913417882673D14S2661482.001 AL358913
S/G/Y/R/B/O NT_025892AL358913417951453D14S2881483.001 AL358913
S/G/Y/R/B/O NT_025892AL133239418563543D14S10131481.001 AL133239
S/G/Y/R/B/O NT_025892AL160211419587442      
S/G/Y/R/B/O NT_025892AL135961420767532      
S/G/Y/R/B/O NT_025892AL109766421939312      
S/G/Y/R/B/O NT_025892AL355888423378883      
S/G/Y/R/B/O NT_025892AL161752425335122      
S/G/Y/R/B/O NT_025892AL356022426672982      
S/G/Y/R/B/O NT_025892AL358293427614963      
S/G/Y/R/B/O NT_025892AL160233429491662      
S/G/Y/R/B/O NT_025892AL049870430274503      
S/G/Y/R/B/O NT_025892AL121809432165963      
S/G/Y/R/B/O NT_025892AL133501434229333      
S/G/Y/R/B/O NT_025892AL162632435813303      
S/G/Y/R/B/O NT_025892AL139354436758163      
S/G/Y/R/B/O NT_025892AL359398438559643      
S/G/Y/R/B/O NT_025892AL158111439599022      
S/G/Y/R/B/O NT_025892AL133449440583193      
S/G/Y/R/B/O NT_025892AL133224442127803WI-13071497.001 AL133224
S/G/Y/R/B/O NT_025892AL161664442748653      
S/G/Y/R/B/O NT_025892AL358341443945092      
S/G/Y/R/B/O NT_025892AL512342444740923      
S/G/Y/R/B/O NT_025892AL355099446134933CHLC.GGAT2D061494.001AL512414, AC018894, AL355099, AL512414
S/G/Y/R/B/O NT_025892AL512414446299133      
S/G/Y/R/B/O NT_025892AL591768447401473WI-37081495.001 AC018894, AC025331, AL591768
S/G/Y/R/B/O NT_025892AL591768448277043D14S10681496.001AL591769, AC021839, AL591768, AL591769
S/G/Y/R/B/O NT_025892AL591769448382793      
S/G/Y/R/B/O NT_025892AL591771449695702      
S/G/Y/R/B/O NT_025892AL359951450811643      
S/G/Y/R/B/O NT_025892AL157792453674543WI-98181493.001 AL157792
S/G/Y/R/B/O NT_025892AL358832454694513WI-36471487.001 AL358832
S/G/Y/R/B/O NT_025892AL079306456434673WI-43891488.001 AL079306
S/G/Y/R/B/O NT_025892AL079306457755413CHLC.GATA90G111490.001 AL079306


  NT_025892 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025892AL079306457825713D14S9761489.001AL162551, AL079306, AL162551
S/G/Y/R/B/O NT_025892AL162551459253173D14S10551491.001AL121576, AL121576, AL162551
S/G/Y/R/B/O NT_025892AL121576459648662      
S/G/Y/R/B/O NT_025892AL161415460623923GCT16B061492.001 AL161415
S/G/Y/R/B/O NT_025892AL359212461724752      
S/G/Y/R/B/O NT_025892AL359332462885522      
S/G/Y/R/B/O NT_025892AL512358463710593      
S/G/Y/R/B/O NT_025892AL358335464772763      
S/G/Y/R/B/O NT_025892AL512359466202613      
S/G/Y/R/B/O NT_025892AL583762467429903      
S/G/Y/R/B/O NT_025892AL358336467863563CHLC.GATA85A111498.001 AL358336
S/G/Y/R/B/O NT_025892AL512360469232033      
S/G/Y/R/B/O NT_025892AL358338470659602      
S/G/Y/R/B/O NT_025892AL110505472163083D14S2551499.001 AL110505
S/G/Y/R/B/O NT_025892AL358339473752832      
S/G/Y/R/B/O NT_025892AL512361474616303AFM122XB214104.001 AL512361
S/G/Y/R/B/O NT_025892AL512361474739023D14S26914100.001 AL512361
S/G/Y/R/B/O NT_025892AL163612475427952      
S/G/Y/R/B/O NT_025892AL139099477490433WI-971414102.001 AB061847, AC019065, AL139099
S/G/Y/R/B/O NT_025892AL139099477938443D14S98414103.001AL591767, AL139099, AL591767
S/G/Y/R/B/O NT_025892AL139099478187333AFMA086YH514101.001AL591767, AL139099, AL591767
S/G/Y/R/B/O NT_025892AL591767478259553      
S/G/Y/R/B/O NT_025892AL627171479713923      
S/G/Y/R/B/O NT_025892AL117692480790423      
S/G/Y/R/B/O NT_025892AL109758482356413      
S/G/Y/R/B/O NT_025892AL359397484336783      
S/G/Y/R/B/O NT_025892AL118556485822902      
S/G/Y/R/B/O NT_025892AL606834487385743      
S/G/Y/R/B/O NT_025892AL133485489033472      
S/G/Y/R/B/O NT_025892AL358334490685472WI-716312108.001 AL358334
S/G/Y/R/B/O NT_025892AL591770491932113      
S/G/Y/R/B/O NT_025892AL591807493452563      
S/G/Y/R/B/O NT_025892AL358332496104493D14S97814107.002 AC109485, AL358332
S/G/Y/R/B/O NT_025892AL122125496451072      
S/G/Y/R/B/O NT_025892AL079307498303193      
S/G/Y/R/B/O NT_025892AL358333500502192WI-577314106.001 AL358333
S/G/Y/R/B/O NT_025892AL358333500508572WI-569214105.001 AL358333
S/G/Y/R/B/O NT_025892AC025872501382411      
S/G/Y/R/B/O NT_025892AL118557501734723WI-658314109.001AC025872, AL358333, AB009817, AC025872, AL118557, AL358333
S/G/Y/R/B/O NT_025892AL118557501915313D14S101814108.001AC025872, AC025872, AL118557
S/G/Y/R/B/O NT_025892AL365475503709963      
S/G/Y/R/B/O NT_025892AL355833505358973      
S/G/Y/R/B/O NT_025892AL157971505924213      
S/G/Y/R/B/O NT_025892AL133453507510352      
S/G/Y/R/B/O NT_025892AL139317509130663      
S/G/Y/R/B/O NT_025892AL352979512107353WI-696014111.001 AL352979
S/G/Y/R/B/O NT_025892AL356020512366062      
S/G/Y/R/B/O NT_025892AL390799514024273D14S98914110.001 AL390799
S/G/Y/R/B/O NT_025892AL365295515394513      
S/G/Y/R/B/O NT_025892AL445886517231493WI-973714112.001 AL445886


  NT_025892 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025892AL445886517385673WI-417214113.001AL163953, AL163953, AL445886
S/G/Y/R/B/O NT_025892AL163953518466942      
S/G/Y/R/B/O NT_025892AL162759519006562WI-391314114.002 AC021258, AC114478, AL162759
S/G/Y/R/B/O NT_025892AL138479520642813CHLC.GGAA10C0914115.001 AL138479
S/G/Y/R/B/O NT_025892AL136297522209492AFMB362YH114116.001 AL136297
S/G/Y/R/B/O NT_025892AL136297522650722CHLC.GATA85D0414117.001 AL136297
S/G/Y/R/B/O NT_025892AL356802523495323      
S/G/Y/R/B/O NT_025892AL049778525303243WI-346214118.001 AL049778
S/G/Y/R/B/O NT_025892AL049778525856473D14S118914119.001AL359792, AL049778, AL049778, AL359792
S/G/Y/R/B/O NT_025892AL359792525862063      
S/G/Y/R/B/O NT_025892AL138994528052532D14S28114120.001 AL138994
S/G/Y/R/B/O NT_025892AL133444529227602D14S99114121.001 AL133444
S/G/Y/R/B/O NT_025892AL133444530082742UTR-989214124.001AL160471, AL133444, AL160471, D38602
S/G/Y/R/B/O NT_025892AL160471530090832WI-723314123.001 AL160471, D38602
S/G/Y/R/B/O NT_025892AL160471530661162D14S105714122.001 AL160471, AL352982
S/G/Y/R/B/O NT_025892AL139316532999783WI-414414125.001 AL139316
S/G/Y/R/B/O NT_025892AL139316533818013D14S27614126.001AL158801, AL139316, AL158801
S/G/Y/R/B/O NT_025892AL158801533918703      
S/G/Y/R/B/O NT_025892AL356801536689613WI-292914127.001AL138499, AL138499, AL356801
S/G/Y/R/B/O NT_025892AL138499536790082      
S/G/Y/R/B/O NT_025892AL355773539241233D14S5214130.001 AL355773
S/G/Y/R/B/O NT_025892AL163952542023573D14S106414129.001AL138995, AC022658, AL138995
S/G/Y/R/B/O NT_025892AL138995542504213CHLC.GATA84B0214128.001 AC022658
S/G/Y/R/B/O NT_025892AL355073543655903      
S/G/Y/R/B/O NT_025892AL162633545397902      
S/G/Y/R/B/O NT_025892AL359234545786322      
S/G/Y/R/B/O NT_025892AL355103546731113D14S28514131.001 AL355103
S/G/Y/R/B/O NT_025892AL355103547430823WI-748014136.001 AL355103
S/G/Y/R/B/O NT_025892AL355103547483063WI-423014141.001 AL355103
S/G/Y/R/B/O NT_025892AL355103547494083D14S6614137.001 AL355103
S/G/Y/R/B/O NT_025892AL161757548148093WI-641414135.001 AL161757
S/G/Y/R/B/O NT_025892AL161757548512713D14S98014138.001 AL161757
S/G/Y/R/B/O NT_025892AL162831550310883      
S/G/Y/R/B/O NT_025892AL137100551282933      
S/G/Y/R/B/O NT_025892AL391152553170893CHLC.GATA3B1214134.001 AC083769, AL391152
S/G/Y/R/B/O NT_025892AL391152553581273D14S27414133.001 AL391152
S/G/Y/R/B/O NT_025892AL139195553804333      
S/G/Y/R/B/O NT_025892AL355834554552593      
S/G/Y/R/B/O NT_025892AL161804556584393      
S/G/Y/R/B/O NT_025892AL136520557564992      
S/G/Y/R/B/O NT_025892AL132668559150243WI-183614140.001 AL132668
S/G/Y/R/B/O NT_025892AL049838561590533WI-626114142.001 AL355792, AL356371
S/G/Y/R/B/O NT_025892AL121579562304332      
S/G/Y/R/B/O NT_025892AL132989564000673WI-650314143.001 AL132989
S/G/Y/R/B/O NT_025892AL139021566122552WI-112514144.001AL135752, AL135752, AL139021
S/G/Y/R/B/O NT_025892AL135752566782082      
S/G/Y/R/B/O NT_025892AL133312567756352      
S/G/Y/R/B/O NT_025892AL121819568352553      
S/G/Y/R/B/O NT_025892AL049873569576973FB14B1214145.001 AC009959, AL049873
S/G/Y/R/B/O NT_025892AL117356571618563CHLC.ATA9G1214146.001 AL117356


  NT_025892 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025892AL359219572527663      
S/G/Y/R/B/O NT_025892AL133502573970493WI-470514147.001 AC012580, AL133502
S/G/Y/R/B/O NT_025892AL133502575348633IB26714148.001AL159140, AC024945, AL133502, AL159140
S/G/Y/R/B/O NT_025892AL159140575895782WI-534114149.001AL162471, AC024945, AL159140, AL162471
S/G/Y/R/B/O NT_025892AL159140576292992WI-917514150.001AL162471, AL159140, AL162471
S/G/Y/R/B/O NT_025892AL162471576663032      
S/G/Y/R/B/O NT_025892AC011210576682151      
S/G/Y/R/B/O NT_025892AC010097576900841      
S/G/Y/R/B/O NT_025892AL121694577313753WI-625314152.001AL162471, AL121694, AL162471
S/G/Y/R/B/O NT_025892AL121694577395353AFM344VD114151.001AL162471, AL121694, AL162471
S/G/Y/R/B/O NT_025892AL121694578228613WI-726314153.001 AL121694
S/G/Y/R/B/O NT_025892AL139194579027273      
S/G/Y/R/B/O NT_025892AL133299580586173      
S/G/Y/R/B/O NT_025892AL157911581926622      
S/G/Y/R/B/O NT_025892AL163853583444322      
S/G/Y/R/B/O NT_025892AL157756584461272D14S99414155.001 AL157756
S/G/Y/R/B/O NT_025892AL157756585206922WI-723214154.001AL132778, AL132778, AL157756
S/G/Y/R/B/O NT_025892AL132778585215482      
S/G/Y/R/B/O NT_025892AL122057586843573      
S/G/Y/R/B/O NT_025892AL049874587413753      
S/G/Y/R/B/O NT_025892AL132777589300942      
S/G/Y/R/B/O NT_025892AL160236591583402CHLC.ATA19H0814156.001 AL160236
S/G/Y/R/B/O NT_025892AL160234592471513      
S/G/Y/R/B/O NT_025892AL359220594024443      
S/G/Y/R/B/O NT_025892AL138996597115833WI-581514157.001 AL138996
S/G/Y/R/B/O NT_025892AL355916597780403WI-721114158.001 AC073576, AL355916
S/G/Y/R/B/O NT_025892AL137129599001283      
S/G/Y/R/B/O NT_025892AL137918600270742      
S/G/Y/R/B/O NT_025892AL356018601853862      
S/G/Y/R/B/O NT_025892AL390816604619633D14S99714159.001AL391154, AC061967, AC090622, AL390816, AL391154
S/G/Y/R/B/O NT_025892AL391154604705833      
S/G/Y/R/B/O NT_025892AL391155606329732      
S/G/Y/R/B/O NT_025892AL389895607386943      
S/G/Y/R/B/O NT_025892AL355101609355333WI-641114160.001 AC024466, AL355101, AL355101
S/G/Y/R/B/O NT_025892AL109985610359543      
S/G/Y/R/B/O NT_025892AL132666612944113D14S29014163.001 AL132666
S/G/Y/R/B/O NT_025892AL132666613094723D14S105914162.001AL137191, AL132666, AL137191
S/G/Y/R/B/O NT_025892AL137191613844163CHLC.GATA27E0314161.001 AL137191
S/G/Y/R/B/O NT_025892AL049871614540053      
S/G/Y/R/B/O NT_025892AL118555615649943      
S/G/Y/R/B/O NT_025892AL132992616590713      
S/G/Y/R/B/O NT_025892AL136038618554063D14S100114164.001 AL136038
S/G/Y/R/B/O NT_025892AL161670619670883D14S99214165.001 AL161670
S/G/Y/R/B/O NT_025892AL162832620638223AFMA065XG52565.001 AL162832, AL355100
S/G/Y/R/B/O NT_025892AL359235622256382WI-431814166.001 AL139177, AL359235
S/G/Y/R/B/O NT_025892AL355094624126043D14S6314167.001 AL139177, AL352983
S/G/Y/R/B/O NT_025892AL161756624817852D14S102614168.001 AF215937, AL161756
S/G/Y/R/B/O NT_025892AL161756625700272WI-353114169.001AL122035, AL122035, AL161756
S/G/Y/R/B/O NT_025892AL122035626046793      
S/G/Y/R/B/O NT_025892AL049869628948793D14S27114170.001AL121774, AL049869, AL121774


  NT_025892 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025892AL121774629378833D14S102414173.001 AL121774
S/G/Y/R/B/O NT_025892AL121774629445983D14S104614171.001 AC026270, AL121774
S/G/Y/R/B/O NT_025892AL121774629947153WI-753614172.001 AC026270, AL121774
S/G/Y/R/B/O NT_025892AL135745630622823      
S/G/Y/R/B/O NT_025892AL139022631674693WI-701614175.001 AF199441, AL139022, X91863
S/G/Y/R/B/O NT_025892AL139022632896283WI-921514176.001 AL139022
S/G/Y/R/B/O NT_025892AL355076633704452WI-86514177.001 AL355076
S/G/Y/R/B/O NT_025892AL355076635245792D14S5714174.001 AL355076
S/G/Y/R/B/O NT_025892AL359236635760023D14S98114178.001 AC022722, AL359236
S/G/Y/R/B/O NT_025892AL355840636486602      
S/G/Y/R/B/O NT_025892AL161871637857583      
S/G/Y/R/B/O NT_025892AL109847639712492WI-678314179.001 AL109847
S/G/Y/R/B/O NT_025892 - D14S2591485.001AL359398, AC112182, AL359398
S/G/Y/R/B/O NT_025892 - D14S791486.002AC011032, AL356596, AC011032, AL356596
S/G/Y/R/B/O NT_025892 - WI-852914132.000AL022326, AJ238852, AL022326
S/G/Y/R/B/O NT_025892 - CHLC.GGAA30H0414139.000