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  Chromosome 18 - YAC Map - Single Contig
 

Chromosome 18 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_033905
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033905AP002400483474451      
S/G/Y/R/B/O NT_033905AP001450483555581      
S/G/Y/R/B/O NT_033905AC011011483577231      
S/G/Y/R/B/O NT_033905AC068154483833201      
S/G/Y/R/B/O NT_033905AC092705484369253      
S/G/Y/R/B/O NT_033905AP001452485374111D18S47018185.001AC068154, AC092705, AP002440, AC068154, AC068344, AC092705, AP001452, AP002440
S/G/Y/R/B/O NT_033905AP001452485488681D18S47318183.001AP002440, AP002440
S/G/Y/R/B/O NT_033905AP002440485573801      
S/G/Y/R/B/O NT_033905AC084115485619151      
S/G/Y/R/B/O NT_033905AC091044485779961      
S/G/Y/R/B/O NT_033905AC105224486172222      
S/G/Y/R/B/O NT_033905AC044841486445911      
S/G/Y/R/B/O NT_033905AP002393486931861      
S/G/Y/R/B/O NT_033905AC090246486936621      
S/G/Y/R/B/O NT_033905AC105227488685732WI-694118187.001 AJ132338
S/G/Y/R/B/O NT_033905AP001488488887371      
S/G/Y/R/B/O NT_033905AC013759490707442D18S47218186.001AC040961, AC092708, AC013759, AC040961, AC092708
S/G/Y/R/B/O NT_033905AC040961490797021      
S/G/Y/R/B/O NT_033905AC090638491057792      
S/G/Y/R/B/O NT_033905AP001374496806521D18S111018192.001 AC091551, AC091551, AP001374
S/G/Y/R/B/O NT_033905AC090395492980941WI-479618188.001AC012433, AC012433, AC015960, AC090395, AP001499
S/G/Y/R/B/O NT_033905AC092708491322841      
S/G/Y/R/B/O NT_033905AC012433491794532      
S/G/Y/R/B/O NT_033905AC015864493111062      
S/G/Y/R/B/O NT_033905AP001169494885163      
S/G/Y/R/B/O NT_033905AC040919495041721      
S/G/Y/R/B/O NT_033905AB043547495468323WI-455618190.001AC040919, AB043547, AC040919, AC087687, AP001845, AP002401
S/G/Y/R/B/O NT_033905AB043547495934213CHLC.GATA41E1018191.001AC040919, AP001374, AB043547, AC040919, AC087687, AC091551, AP001374, AP001845, AP002401
S/G/Y/R/B/O NT_033905AC090330497551921D18S47418193.001AC080062, AP001339, AC080062, AC090330, AP001339
S/G/Y/R/B/O NT_033905AC090330497614381NIB181018194.001AC080062, AP001339, AC080062, AC090330, AP001339
S/G/Y/R/B/O NT_033905AC020615497142281      
S/G/Y/R/B/O NT_033905AC080062497163791      
S/G/Y/R/B/O NT_033905AC018522497173221      
S/G/Y/R/B/O NT_033905AP001339497184411      
S/G/Y/R/B/O NT_033905AC090465498645941AFM200YG918189.001AC080062, AC080062, AC090465
S/G/Y/R/B/O NT_033905AC090465498752831AFMB339XC518195.001AC020615, AC080062, AC020615, AC080062, AC087306, AC090465
S/G/Y/R/B/O NT_033905AC109315499901722WI-448018196.001AC018522, AP001353, AC012102, AC018522, AC087306, AC109315, AP001353
S/G/Y/R/B/O NT_033905AC109315500435162WI-642718197.001AC018522, AC020615, AP001353, AC012102, AC018522, AC020615, AC087306, AC109315, AP001353
S/G/Y/R/B/O NT_033905AP001353500799041      
S/G/Y/R/B/O NT_033905AC011260501958923AFM220XG718199.001 AC011260, AC021843, AC090770, AP001378
S/G/Y/R/B/O NT_033905AC027216502498533      
S/G/Y/R/B/O NT_033905AC022701504085603      
S/G/Y/R/B/O NT_033905AC080051505564333      
S/G/Y/R/B/O NT_033905AC105032505793003      
S/G/Y/R/B/O NT_033905AC105039506985412D18S109918200.001 AC105039
S/G/Y/R/B/O NT_033905AC090660507308552      
S/G/Y/R/B/O NT_033905AC078999508230202      
S/G/Y/R/B/O NT_033905AC021486510907963D18S48418205.001 AC015567, AC019239, AC021486, AP001375
S/G/Y/R/B/O NT_033905AC091647511132383CHLC.GATA6D0918204.001 AP001375
S/G/Y/R/B/O NT_033905AC091647512314933CHLC.GAAT1E0718203.001 AC015567, AC019239, AC083918, AC091647, AP001484


  NT_033905 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033905AC011155513460003WI-525718201.001 AC011155, AC015953, AC090219, AP001934
S/G/Y/R/B/O NT_033905AC011155513482963WI-411518202.001 AC011155, AC015953, AC090219, AP001934
S/G/Y/R/B/O NT_033905AC016383513938202      
S/G/Y/R/B/O NT_033905AC090227514967591WI-406418180.001AC011011, AP001847, AC011011, AC079827, AC090227, AP001847
S/G/Y/R/B/O NT_033905AP001847516226611      
S/G/Y/R/B/O NT_033905AC091170516650261WI-865618181.001AP001814, AC091170, AP001814
S/G/Y/R/B/O NT_033905AC091170517737921WI-968718179.001 AB061824, AC091170
S/G/Y/R/B/O NT_033905AP001814516506911      
S/G/Y/R/B/O NT_033905 - D18S114518178.001AC046181, AC103676, AC046181, AC103676
S/G/Y/R/B/O NT_033905 - D18S46718182.000  
S/G/Y/R/B/O NT_033905 - D18S47918184.000  
S/G/Y/R/B/O NT_033905 - WI-863618198.001AL592166, AL592166, AL611928, X67247