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  Chromosome Y - YAC Map - Single Contig
 

Chromosome Y - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011896 NT_011878 NT_011875 NT_011903 NT_025975 NT_025441


  NT_011896
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011896AC00604025167063WI-8991X3.001 AC006040
S/G/Y/R/B/O NT_011896AC07418126863053      
S/G/Y/R/B/O NT_011896AC00615726932243      
S/G/Y/R/B/O NT_011896AC00603228850993DXYS95X1.001 AC006032
S/G/Y/R/B/O NT_011896AC00615230177893      
S/G/Y/R/B/O NT_011896AC01130531528323      
S/G/Y/R/B/O NT_011896AC00947932221173      
S/G/Y/R/B/O NT_011896AC01905833772163      
S/G/Y/R/B/O NT_011896AC02403834727073      
S/G/Y/R/B/O NT_011896AC01207835561283      
S/G/Y/R/B/O NT_011896AC01009437930943DXYS110X231.002AL121873, AC002488, AC002509, AC010094, AL121873
S/G/Y/R/B/O NT_011896AC01073738544933DXYS113X232.002AL133328, AC010737, AL133328
S/G/Y/R/B/O NT_011896AC01073738634113DXYS112X230.002AL133328, AC010737, AL133328
S/G/Y/R/B/O NT_011896AC01073738856523DXYS111X226.001 AC010737
S/G/Y/R/B/O NT_011896AC01073739038523DXYS115X228.002AL133328, AC010737, AL133328
S/G/Y/R/B/O NT_011896AC01008439868583DXYS116X229.002AL133328, AC010084, AL133328
S/G/Y/R/B/O NT_011896AC01008440109563DXYS2X227.002AL133328, AC010084, AL133328
S/G/Y/R/B/O NT_011896AC01090540990033DXYS118X233.001 AC010905
S/G/Y/R/B/O NT_011896AC01010642223783      
S/G/Y/R/B/O NT_011896AC02470342411973      
S/G/Y/R/B/O NT_011896AC01207744225713DXYS119X225.001 AC012077
S/G/Y/R/B/O NT_011896AC01014244819853      
S/G/Y/R/B/O NT_011896AC01906046182473      
S/G/Y/R/B/O NT_011896AC02342347894793WI-3709X224.002AL627250, AC023423, AL627250
S/G/Y/R/B/O NT_011896AC01072248939013DXYS124X221.002AC004388, AC004388, AC010722, AC011898
S/G/Y/R/B/O NT_011896AC01068550294703DXYS121X220.002AC004478, AC004478, AC010685, AC011898
S/G/Y/R/B/O NT_011896AC01068550426833WI-3340X223.002AC004478, AC004478, AC010685, AC011898, AJ002428
S/G/Y/R/B/O NT_011896AC01068551371853DXYS9X219.001 AC010685
S/G/Y/R/B/O NT_011896AC01012951432833      
S/G/Y/R/B/O NT_011896AC01206752325253DXYS122X218.001 AC004072, AC012067
S/G/Y/R/B/O NT_011896AC01206753052453DXYS123X217.002AL133274, AC004072, AC012067, AL133274
S/G/Y/R/B/O NT_011896AC01266753515353      
S/G/Y/R/B/O NT_011896AC01008154263393      
S/G/Y/R/B/O NT_011896AC01087456575563DXYS4X216.002AL121871, AC010874, AL121871
S/G/Y/R/B/O NT_011896AC01097757167653      
S/G/Y/R/B/O NT_011896AC01668158528503      
S/G/Y/R/B/O NT_011896AC01014059213763      
S/G/Y/R/B/O NT_011896AC00633560695183      
S/G/Y/R/B/O NT_011896AC01015462918303      
S/G/Y/R/B/O NT_011896AC01014463469813      
S/G/Y/R/B/O NT_011896AC01072865131283      
S/G/Y/R/B/O NT_011896AC01341265290983      
S/G/Y/R/B/O NT_011896AC01129767291123      
S/G/Y/R/B/O NT_011896AC01206867833073      
S/G/Y/R/B/O NT_011896AC01010469496233      
S/G/Y/R/B/O NT_011896AC01014370596733      
S/G/Y/R/B/O NT_011896AC00728471395213      
S/G/Y/R/B/O NT_011896AC00724773107703      
S/G/Y/R/B/O NT_011896AC00727474273583      
S/G/Y/R/B/O NT_011896AC00727575444673      


  NT_011896 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011896AC01067877141713      
S/G/Y/R/B/O NT_011896AC01090277894073      
S/G/Y/R/B/O NT_011896AC01674979033763      
S/G/Y/R/B/O NT_011896AC05166380902933      
S/G/Y/R/B/O NT_011896AC02573181845073      
S/G/Y/R/B/O NT_011896AC01699182759613      
S/G/Y/R/B/O NT_011896AC06482984501633      
S/G/Y/R/B/O NT_011896AC00949185396473      
S/G/Y/R/B/O NT_011896AC00796786803813      
S/G/Y/R/B/O NT_011896AC06871988677283      
S/G/Y/R/B/O NT_011896AC07912688785123