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  Chromosome 15 - Genetic Maps - Single Contig
 

Chromosome 15 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_037852 NT_077631 NT_078094 NT_026446 NT_078095 NT_010280 NT_078096 NT_010194
NT_077661 NT_010274 NT_035325


  NT_010274
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMar ChrMarshfieldDeC ChrDeCODEPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC048382826217073          
S/G/Y/R/B/O NT_010274AC115102827931933          
S/G/Y/R/B/O NT_010274AC087732828268883          
S/G/Y/R/B/O NT_010274AC012291829688253ATA24D04  1578.92  1 AC010757.5, AC012291.11
S/G/Y/R/B/O NT_010274AC103741830078893UT7572  1580.04  1 AC103741.2
S/G/Y/R/B/O NT_010274AC087468830159143          
S/G/Y/R/B/O NT_010274AC027078831809023          
S/G/Y/R/B/O NT_010274AC044860834701303AFM200ZG111577.601580.041589.301 AC044860.11, AC104046.2
S/G/Y/R/B/O NT_010274AC104046834927743UT941  1578.92  1 AC104046.2
S/G/Y/R/B/O NT_010274AC104046834988213AFMA204ZG51577.601580.04  1 AC023140.4, AC104046.2
S/G/Y/R/B/O NT_010274AC110592835620453          
S/G/Y/R/B/O NT_010274AC087286838325943AFMB046YH11578.301580.041589.301 AC007897.4, AC021739.16, AC022221.5, AC026840.4, AC068402.2, AC087286.12
S/G/Y/R/B/O NT_010274AC021739838560243          
S/G/Y/R/B/O NT_010274AC104229839343283          
S/G/Y/R/B/O NT_010274AC136768840932413          
S/G/Y/R/B/O NT_010274AC104593841164303          
S/G/Y/R/B/O NT_010274AC016180841456083AFM281YH11580.201582.281589.441 AC016180.14, AC025841.5
S/G/Y/R/B/O NT_010274AC107978843244993          
S/G/Y/R/B/O NT_010274AC025842843608373          
S/G/Y/R/B/O NT_010274AC069197844977623          
S/G/Y/R/B/O NT_010274AC022817845848703          
S/G/Y/R/B/O NT_010274AC012229847119113          
S/G/Y/R/B/O NT_010274AC018950848253393          
S/G/Y/R/B/O NT_010274AC016987851424293AFM309ZF11580.401582.281591.491 AC011629.5, AC016987.4, AC078905.5, AC104589.3
S/G/Y/R/B/O NT_010274AC078905851843803AFM182YB41580.301582.281591.491 AC011629.5, AC078905.5, AC104589.3
S/G/Y/R/B/O NT_010274AC105204852468583          
S/G/Y/R/B/O NT_010274AC079208854255733          
S/G/Y/R/B/O NT_010274AC090257855189023AFM107XG71580.901582.841591.961 AC015558.9, AC018787.5, AC090257.5
S/G/Y/R/B/O NT_010274AC090257855632663ATA28G05  1582.841592.081  
S/G/Y/R/B/O NT_010274AC020687857455833AFMA055ZH51581.501583.40  1 AC020687.6, AC103871.2, AC107876.2
S/G/Y/R/B/O NT_010274AC103871857475543          
S/G/Y/R/B/O NT_010274AC015463859147823          
S/G/Y/R/B/O NT_010274AC011966859353203          
S/G/Y/R/B/O NT_010274AC021677860826383          
S/G/Y/R/B/O NT_010274AC009711864195923AFMA232YF91581.401583.401593.211 AC009711.10, AC015556.15, AC087593.6
S/G/Y/R/B/O NT_010274AC087593864260183          
S/G/Y/R/B/O NT_010274AC142404865407063          
S/G/Y/R/B/O NT_010274AC142401865649253          
S/G/Y/R/B/O NT_010274AC013489866022183          
S/G/Y/R/B/O NT_010274AC104259867641263          
S/G/Y/R/B/O NT_010274AC103982868396283          
S/G/Y/R/B/O NT_010274AC067805870163613          
S/G/Y/R/B/O NT_010274AC107954871064693          
S/G/Y/R/B/O NT_010274AC013565871827853AFMA054WH91583.701585.641594.831 AC013565.10, AC055784.2
S/G/Y/R/B/O NT_010274AC124068873134113          
S/G/Y/R/B/O NT_010274AC133637874693913          
S/G/Y/R/B/O NT_010274AC013391875888153AFM282WG51583.701585.641595.481 AC013391.12, AC104578.1
S/G/Y/R/B/O NT_010274AC013391876008093AFM078ZF71583.701585.641595.491 AC013391.12, AC133629.2
S/G/Y/R/B/O NT_010274AC013787877224553          
S/G/Y/R/B/O NT_010274AC079075878296853          


  NT_010274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMar ChrMarshfieldDeC ChrDeCODEPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC018988879745743UT644  1585.64  1 AC013281.5, AC015494.6, AC018988.12, AC027176.22, AC087478.3
S/G/Y/R/B/O NT_010274AC027176881144353UT479  1585.641596.081 AC027176.22, AC027638.5, AC087284.22
S/G/Y/R/B/O NT_010274AC087284881209803          
S/G/Y/R/B/O NT_010274AC092769882173473          
S/G/Y/R/B/O NT_010274AC091167883869403UT478  1585.64  1 AC058820.2, AC091167.19
S/G/Y/R/B/O NT_010274AC018946885745993AFMB027WD51584.801586.81  1 AC004587.1, AC006411.2, AC018946.12, AC027478.2
S/G/Y/R/B/O NT_010274AC103739886274053          
S/G/Y/R/B/O NT_010274AC021422887693563          
S/G/Y/R/B/O NT_010274AC124248889848323AFM224XE111584.801586.811597.261 AC004586.1, AC004586.2, AC124248.6
S/G/Y/R/B/O NT_010274AC124248890231683FES  1586.81  1 AC003004.1, AC004586.1, AC004586.2, AC124248.6
S/G/Y/R/B/O NT_010274AC067986890301853          
S/G/Y/R/B/O NT_010274AC068831890464393          
S/G/Y/R/B/O NT_010274AC127520891786003          
S/G/Y/R/B/O NT_010274AC123784893288863AFM234VF121584.801586.811598.271 AC002426.1, AC123784.2
S/G/Y/R/B/O NT_010274AC123784893793923AFMA113WH51584.801586.81  1 AC002426.1, AC003024.1, AC123784.2
S/G/Y/R/B/O NT_010274AC130683894547813          
S/G/Y/R/B/O NT_010274AC104035894705623          
S/G/Y/R/B/O NT_010274AC107958896590833          
S/G/Y/R/B/O NT_010274AC105109898158413          
S/G/Y/R/B/O NT_010274AC104020898796313          
S/G/Y/R/B/O NT_010274AC104236901045673ATA24A08  1590.021599.921 AC006407.2, AC104236.2, AC113190.8
S/G/Y/R/B/O NT_010274AC113190901471523          
S/G/Y/R/B/O NT_010274AC135996902483143          
S/G/Y/R/B/O NT_010274AC116903902735433          
S/G/Y/R/B/O NT_010274AC116162904213163          
S/G/Y/R/B/O NT_010274AC090985905259503          
S/G/Y/R/B/O NT_010274AC091580906355913          
S/G/Y/R/B/O NT_010274AC091544907159133          
S/G/Y/R/B/O NT_010274AC106028908886243          
S/G/Y/R/B/O NT_010274AC013394909971403          
S/G/Y/R/B/O NT_010274AC087641911719763          
S/G/Y/R/B/O NT_010274AC108457912227623          
S/G/Y/R/B/O NT_010274AC112693913327833          
S/G/Y/R/B/O NT_010274AC023114914332613          
S/G/Y/R/B/O NT_010274AC091078915006533          
S/G/Y/R/B/O NT_010274AC110023916808963          
S/G/Y/R/B/O NT_010274AC107979918428913ATA22D04  1598.44  1 AC090762.9, AC107979.7
S/G/Y/R/B/O NT_010274AC107979919182503AFMB077YD51595.701598.44  1 AC103996.7, AC107979.7, AL365198.12
S/G/Y/R/B/O NT_010274AC103996919410363          
S/G/Y/R/B/O NT_010274AC104390921088793UT5205  1598.44  1  
S/G/Y/R/B/O NT_010274AC104390921300173GATA128A02  1598.4415108.211  
S/G/Y/R/B/O NT_010274AC080032921690383          
S/G/Y/R/B/O NT_010274AC110027922984023AFM072YB111598.0015100.5915108.211 AC110027.5, AC135626.4
S/G/Y/R/B/O NT_010274AC135626923622553          
S/G/Y/R/B/O NT_010274AC103749925607533AFM357TD91598.1015100.5915110.931 AC011714.10, AC103749.2, AC104347.2, AC117832.6
S/G/Y/R/B/O NT_010274AC103749926068513GATA73F01  15100.5915110.931  
S/G/Y/R/B/O NT_010274AC009432926229993          
S/G/Y/R/B/O NT_010274AC103986927720273          
S/G/Y/R/B/O NT_010274AC022308928242303          
S/G/Y/R/B/O NT_010274AC107976929559843          


  NT_010274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMar ChrMarshfieldDeC ChrDeCODEPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC087633931412423GATA161C02  15102.2115111.281 AC021111.3, AC087633.5
S/G/Y/R/B/O NT_010274AC087636932333723          
S/G/Y/R/B/O NT_010274AC104260934228433AFM217ZG115103.5015102.2115112.691 AC016322.9, AC023111.4, AC104260.5, AC106006.1
S/G/Y/R/B/O NT_010274AC027547935157243          
S/G/Y/R/B/O NT_010274AC027013935652413          
S/G/Y/R/B/O NT_010274AC068515937980013AFM309VG915100.8015102.2115115.061 AC012256.5, AC015572.8, AC015574.8, AC068515.6
S/G/Y/R/B/O NT_010274AC015574938262473          
S/G/Y/R/B/O NT_010274AC011114939244513          
S/G/Y/R/B/O NT_010274AC018574940244213          
S/G/Y/R/B/O NT_010274AC024337941774223          
S/G/Y/R/B/O NT_010274AC012409942920193GATA22F01  15104.8615116.481 AC012409.9, AC016251.9
S/G/Y/R/B/O NT_010274AC016251944022703          
S/G/Y/R/B/O NT_010274AC103746944726123          
S/G/Y/R/B/O NT_010274AC087477944837153          
S/G/Y/R/B/O NT_010274AC110588946720753          
S/G/Y/R/B/O NT_010274AC080145948072583          
S/G/Y/R/B/O NT_010274AC027004948963913          
S/G/Y/R/B/O NT_010274AC006212950462093          
S/G/Y/R/B/O NT_010274AC055873951817123          
S/G/Y/R/B/O NT_010274AC020704954589423AFM338YC515103.5015107.7115119.571 AC020704.5, AC087804.3
S/G/Y/R/B/O NT_010274AC109808955896993AFMB306XD915103.5015107.71  1 AC109808.6
S/G/Y/R/B/O NT_010274AC026523956700883UT6124  15109.29  1 AC026523.9
S/G/Y/R/B/O NT_010274AC026523957228943AFM331VB515106.6015109.29  1 AC013794.5, AC026523.9
S/G/Y/R/B/O NT_010274AC027708958798703MFD87  15109.29  1 AC027708.12
S/G/Y/R/B/O NT_010274AC027708959208283GATA197B10  15109.29  1 AC024651.13, AC027708.12
S/G/Y/R/B/O NT_010274AC024651959345843          
S/G/Y/R/B/O NT_010274 - UT6886  15107.71  1 AC008782.6, AC016570.2, AC016608.5, AC020918.6