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  Chromosome 17 - Genetic Maps - Single Contig
 

Chromosome 17 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010718
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AC008053109757501AFMA298WA91718.201715.771AC026130, AC008053, AC026130
S/G/Y/R/B/O NT_010718AC010964102685461        
S/G/Y/R/B/O NT_010718AC026591125521112AFM282YD11722.001721.011AC005747, AC005747, AC026591
S/G/Y/R/B/O NT_010718AC026591125942912AFM225ZC11721.901721.011AC005747, AC107938, AC005747, AC026591, AC107938
S/G/Y/R/B/O NT_010718AC073337102960011        
S/G/Y/R/B/O NT_010718AC090610102992121        
S/G/Y/R/B/O NT_010718AC002091103676493AFMB362YG11718.201717.381AC073337, AC090610, AC002091, AC073337, AC090610
S/G/Y/R/B/O NT_010718AC003695104240903AFM051XD101718.101717.381AC002091, AC002091, AC003695
S/G/Y/R/B/O NT_010718AC009451105287901        
S/G/Y/R/B/O NT_010718AC025963106380341        
S/G/Y/R/B/O NT_010718AC011061106595511AFMA223YB11717.601716.841AC009451, AC025963, AC009451, AC011061, AC025959, AC025963
S/G/Y/R/B/O NT_010718AC025518107644941        
S/G/Y/R/B/O NT_010718AC026130108307811UT184  1716.841AC025518, AC025518, AC026130
S/G/Y/R/B/O NT_010718AC005695111603743AFM302WH91718.201717.381 AC005695
S/G/Y/R/B/O NT_010718AC005695112031493AFMA134XH51718.801717.921 AC005695
S/G/Y/R/B/O NT_010718AC009335112604943        
S/G/Y/R/B/O NT_010718AC087501114062121        
S/G/Y/R/B/O NT_010718AC021164114538741        
S/G/Y/R/B/O NT_010718AC073621115406361        
S/G/Y/R/B/O NT_010718AC069486115750101        
S/G/Y/R/B/O NT_010718AC015818116760141        
S/G/Y/R/B/O NT_010718AL353997117455692        
S/G/Y/R/B/O NT_010718AL035367118438003        
S/G/Y/R/B/O NT_010718AC020567119762851        
S/G/Y/R/B/O NT_010718AC109515119853382        
S/G/Y/R/B/O NT_010718AC027045120285201        
S/G/Y/R/B/O NT_010718AC026855120796791        
S/G/Y/R/B/O NT_010718AC087646120910071        
S/G/Y/R/B/O NT_010718AC069006121076411        
S/G/Y/R/B/O NT_010718AC087499123181991        
S/G/Y/R/B/O NT_010718AC022319123651831        
S/G/Y/R/B/O NT_010718AC106031124352642AFM350ZB11749.50  1AC022319, AC022319, AC106031, AL356743
S/G/Y/R/B/O NT_010718AC106031124352642AFM350ZB1  1748.071AC022319, AC022319, AC106031, AL356743
S/G/Y/R/B/O NT_010718AC005747126022133        
S/G/Y/R/B/O NT_010718AC107938126836472        
S/G/Y/R/B/O NT_010718AC000003127031453        
S/G/Y/R/B/O NT_010718AC083783128413692AFMA070TC51723.201722.241 AC083783
S/G/Y/R/B/O NT_010718AC005291129979213MFD144A  1722.241 AC005291
S/G/Y/R/B/O NT_010718AC005323130418273        
S/G/Y/R/B/O NT_010718AC002347132441103AFMB336ZG91723.201722.241 AC002347, AC034303
S/G/Y/R/B/O NT_010718AC002347132472753GATA8C04  1722.241 AC034303
S/G/Y/R/B/O NT_010718AC002347133757393UT5567  1722.241AC015908, AC002347, AC015908
S/G/Y/R/B/O NT_010718AC015908134617823GATA134G03  1722.241 AC015908, AC073304
S/G/Y/R/B/O NT_010718AC015908135202413AFM316VG11723.201722.241AC005284, AC005284
S/G/Y/R/B/O NT_010718AC005284135878943GATA64B04  1723.561 AC005284
S/G/Y/R/B/O NT_010718AC005548137067813        
S/G/Y/R/B/O NT_010718AC005725138692863UT49  1714.691 AC005725
S/G/Y/R/B/O NT_010718AC055825140575073        
S/G/Y/R/B/O NT_010718AC007510141130903AFMA054YH91725.001725.141 AC007510
S/G/Y/R/B/O NT_010718AC007510141254453UT65  1725.141 AC007510


  NT_010718 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AC005701143264673UT223  1726.771  
S/G/Y/R/B/O NT_010718AC005209145735573GATA10H07  1727.751 AC005209
S/G/Y/R/B/O NT_010718AC005410145922793        
S/G/Y/R/B/O NT_010718AC005244147279993        
S/G/Y/R/B/O NT_010718AC005245148537343        
S/G/Y/R/B/O NT_010718AC084836150238181        
S/G/Y/R/B/O NT_010718AC021513151631792        
S/G/Y/R/B/O NT_010718AC006079151999653        
S/G/Y/R/B/O NT_010718AC068442152054353        
S/G/Y/R/B/O NT_010718AC005358152928423AFMA219YE91732.701731.961 AC005358
S/G/Y/R/B/O NT_010718AC005274155349413AFM290VC91732.801731.961 AC005274
S/G/Y/R/B/O NT_010718AC005277156116433        
S/G/Y/R/B/O NT_010718AC005303157284323        
S/G/Y/R/B/O NT_010718AC003664158639633AFMA272XB91732.801731.961 AC003664
S/G/Y/R/B/O NT_010718AC003664158995613AFM192YH21732.801731.961 AC003664
S/G/Y/R/B/O NT_010718AC003664159260723UT176  1731.961 AC003664
S/G/Y/R/B/O NT_010718AC005375161617893AFM260YG51732.801731.961AC005411, AC005375, AC005411
S/G/Y/R/B/O NT_010718AC005411161636773        
S/G/Y/R/B/O NT_010718AC015842163255853        
S/G/Y/R/B/O NT_010718AC005497164395183        
S/G/Y/R/B/O NT_010718AC005304166455383AFMB355ZF51736.401735.551 AC005304
S/G/Y/R/B/O NT_010718AC005389167597173AFM197XH61736.401735.551 AC005389
S/G/Y/R/B/O NT_010718AC005224169235073UT405  1736.141 AC005224
S/G/Y/R/B/O NT_010718AC022816169892043AFM191XH121737.301736.141 AC022816
S/G/Y/R/B/O NT_010718AC006578170804243AFM317YG11738.301737.311 AC006578, AC025205, AC078823
S/G/Y/R/B/O NT_010718AC005900172137953AFM200YB121738.401737.801 AC005900
S/G/Y/R/B/O NT_010718AC013248173218393        
S/G/Y/R/B/O NT_010718AC005863173864103        
S/G/Y/R/B/O NT_010718AC005773175566073        
S/G/Y/R/B/O NT_010718AC005772176536433        
S/G/Y/R/B/O NT_010718AC005703178842783UT1860  1741.121 AC005703, AC021300
S/G/Y/R/B/O NT_010718AC005703179379503PRM11GT  1741.121 AC005703, AC021300
S/G/Y/R/B/O NT_010718AC005517180883703MFD41  1741.121 AC084256
S/G/Y/R/B/O NT_010718AC005838181626443        
S/G/Y/R/B/O NT_010718AC005324182234123        
S/G/Y/R/B/O NT_010718AC015922183969452        
S/G/Y/R/B/O NT_010718AC006251185196403        
S/G/Y/R/B/O NT_010718AC002553187927033AFMB302YD91744.001741.121 AC002553
S/G/Y/R/B/O NT_010718AC005971188307743AFM304XH51744.201743.011 AJ009616
S/G/Y/R/B/O NT_010718AC093484189913593        
S/G/Y/R/B/O NT_010718AJ009612191435453AFMB357YG91744.101743.011 AJ009612
S/G/Y/R/B/O NT_010718AC005822192260553        
S/G/Y/R/B/O NT_010718AC098850192553852        
S/G/Y/R/B/O NT_010718AC022596194343503        
S/G/Y/R/B/O NT_010718AL353996195064313        
S/G/Y/R/B/O NT_010718AC104024199656632D17S740  1744.621 AC104024
S/G/Y/R/B/O NT_010718AC027775196992811        
S/G/Y/R/B/O NT_010718AC006071197036543GATA185H04  1744.621AC002092, AC027775, AC073621, AC002092, AC006071, AC027775, AC073621
S/G/Y/R/B/O NT_010718AC002092197873061        
S/G/Y/R/B/O NT_010718AJ009613197974653        


  NT_010718 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010718AC055811198273981        
S/G/Y/R/B/O NT_010718AC079111200600351        
S/G/Y/R/B/O NT_010718AC020558202171383AFMA151WG51749.501747.001AC080148, AC020558, AC080148, AC090608
S/G/Y/R/B/O NT_010718AC020558202853253UT159  1747.001AC078903, AC080148, AC020558, AC078903, AC080148, AC090608
S/G/Y/R/B/O NT_010718AC078903202864011        
S/G/Y/R/B/O NT_010718AC080148203200371        
S/G/Y/R/B/O NT_010718AL354000203574222        
S/G/Y/R/B/O NT_010718AC087163205179641        
S/G/Y/R/B/O NT_010718AC087164206533873        
S/G/Y/R/B/O NT_010718 - AFM347XA91749.40  2AC068619, AC090774, AC091134, AC107940, AC068619, AC090774, AC091134, AC107940
S/G/Y/R/B/O NT_010718 - AFMB304XD5  1716.840  
S/G/Y/R/B/O NT_010718 - AFM240XE51749.50  1AC090774, AC090774, AL356743
S/G/Y/R/B/O NT_010718 - ATA1H07  1745.931  
S/G/Y/R/B/O NT_010718 - UT26  1747.001AC090844, AC090844
S/G/Y/R/B/O NT_010718 - UT38  1747.000  
S/G/Y/R/B/O NT_010718 - UT263  1747.001AC022214, AC087393, AC022214, AC087393