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  Chromosome 17 - Genetic Maps - Single Contig
 

Chromosome 17 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010783
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC018628483186891        
S/G/Y/R/B/O NT_010783AC008158485524403AFMA290WE11784.101782.561 AC008158
S/G/Y/R/B/O NT_010783AC060798485847231        
S/G/Y/R/B/O NT_010783AC005969486275953        
S/G/Y/R/B/O NT_010783AC002994488255663AFMB354WE11784.201782.561 AC002994
S/G/Y/R/B/O NT_010783AC002994488390243UT1514  1782.561 AC002994
S/G/Y/R/B/O NT_010783AC005901489146513        
S/G/Y/R/B/O NT_010783AC005746491090483AFMB048ZC11783.701782.561 AC005746
S/G/Y/R/B/O NT_010783AC005856492567703        
S/G/Y/R/B/O NT_010783AC005884493816813        
S/G/Y/R/B/O NT_010783AC015876495018681        
S/G/Y/R/B/O NT_010783AC079005496160112        
S/G/Y/R/B/O NT_010783AC110602497593892        
S/G/Y/R/B/O NT_010783AC053536497622891        
S/G/Y/R/B/O NT_010783AC090166497686771        
S/G/Y/R/B/O NT_010783AC091154498313932        
S/G/Y/R/B/O NT_010783AC004606500071763        
S/G/Y/R/B/O NT_010783AC087496500655183        
S/G/Y/R/B/O NT_010783AC005341501235863        
S/G/Y/R/B/O NT_010783AC090614502608833        
S/G/Y/R/B/O NT_010783AC090079504134351        
S/G/Y/R/B/O NT_010783AC034268504147132        
S/G/Y/R/B/O NT_010783AC019315506136483        
S/G/Y/R/B/O NT_010783AC023934507588021        
S/G/Y/R/B/O NT_010783AC021010508259621        
S/G/Y/R/B/O NT_010783AC019147509401911        
S/G/Y/R/B/O NT_010783AC009720509454991        
S/G/Y/R/B/O NT_010783AC092713509637721        
S/G/Y/R/B/O NT_010783AC046185510131491        
S/G/Y/R/B/O NT_010783AC074102510599351        
S/G/Y/R/B/O NT_010783AC015813510919191        
S/G/Y/R/B/O NT_010783AC002345511007591        
S/G/Y/R/B/O NT_010783AC112167511240741        
S/G/Y/R/B/O NT_010783AC069454511685111        
S/G/Y/R/B/O NT_010783AC008026511867851        
S/G/Y/R/B/O NT_010783AC004167512653593        
S/G/Y/R/B/O NT_010783AC005667513882343        
S/G/Y/R/B/O NT_010783AC091059514823401        
S/G/Y/R/B/O NT_010783AC018718514948901        
S/G/Y/R/B/O NT_010783AC069293515035551        
S/G/Y/R/B/O NT_010783AC113210515270282        
S/G/Y/R/B/O NT_010783AC027801516374193AFMA154ZA91769.401768.441AC009720, AC009720, AC027801
S/G/Y/R/B/O NT_010783AC015795517221363AFM269ZB11769.401768.441 AC015795
S/G/Y/R/B/O NT_010783AC006487518131223        
S/G/Y/R/B/O NT_010783AC015656520081961AFM179XA11769.301766.851 AC015656
S/G/Y/R/B/O NT_010783AC091180520088133        
S/G/Y/R/B/O NT_010783AC004797521640873        
S/G/Y/R/B/O NT_010783AC060233522791501        
S/G/Y/R/B/O NT_010783AC005828523888973AFM277VG91784.201782.561 AC005828
S/G/Y/R/B/O NT_010783AC015923524469302        


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC068285525261671        
S/G/Y/R/B/O NT_010783AC006270525344243        
S/G/Y/R/B/O NT_010783AC037445527123523        
S/G/Y/R/B/O NT_010783AC005972528358883AFM291VE91784.101782.561AC068512, AC005972, AC068512
S/G/Y/R/B/O NT_010783AC005972528829953UT1443  1782.001AC068512, AC005972, AC068512
S/G/Y/R/B/O NT_010783AC005972528882993AFM203WH41784.201782.001AC068512, AC005972, AC068512
S/G/Y/R/B/O NT_010783AC068512529166221        
S/G/Y/R/B/O NT_010783AC005821530078863AFM168XD121784.201783.401AC068401, AC005821, AC068401
S/G/Y/R/B/O NT_010783AC005821530787183AFMB035XC51784.201782.561AC068401, AC080038, AC005821, AC068401, AC080038
S/G/Y/R/B/O NT_010783AC068401531120871        
S/G/Y/R/B/O NT_010783AC018571531918801        
S/G/Y/R/B/O NT_010783AC015651531999303        
S/G/Y/R/B/O NT_010783AC040958534070561UT402  1782.001 AC040958, J03071
S/G/Y/R/B/O NT_010783AC084858533866411        
S/G/Y/R/B/O NT_010783AC005803534137493        
S/G/Y/R/B/O NT_010783AC025362536312382ATA8B07  1783.401 AC025362
S/G/Y/R/B/O NT_010783AC016489536905861        
S/G/Y/R/B/O NT_010783AC073299537128671        
S/G/Y/R/B/O NT_010783AC000389537534913        
S/G/Y/R/B/O NT_010783AC032016537583872        
S/G/Y/R/B/O NT_010783AC011848538211742        
S/G/Y/R/B/O NT_010783AC022732539368091        
S/G/Y/R/B/O NT_010783AC053481540553201        
S/G/Y/R/B/O NT_010783AC080038542539801AFM238YF81784.201782.561 AC080038
S/G/Y/R/B/O NT_010783AC090167543658631        
S/G/Y/R/B/O NT_010783AC003962545824143AFM200VA91783.801782.001 AC003962
S/G/Y/R/B/O NT_010783AC037475546407093        
S/G/Y/R/B/O NT_010783AC011921547546373        
S/G/Y/R/B/O NT_010783AC025515548924031        
S/G/Y/R/B/O NT_010783AC023352550218581        
S/G/Y/R/B/O NT_010783AC025048550777611AFM158XC31783.901782.561AC090167, AC025048, AC090167
S/G/Y/R/B/O NT_010783AC025048550959231UT5239  1776.181AC023352, AC090167, AC023352, AC025048, AC090167
S/G/Y/R/B/O NT_010783AC005702551745073        
S/G/Y/R/B/O NT_010783AC004686553401103AFMA163TF91782.901781.461 AC004686
S/G/Y/R/B/O NT_010783AC025858554186861        
S/G/Y/R/B/O NT_010783AC040904554258541        
S/G/Y/R/B/O NT_010783AC091271555410281        
S/G/Y/R/B/O NT_010783AC021005557313172        
S/G/Y/R/B/O NT_010783AC091113557781042        
S/G/Y/R/B/O NT_010783AC010767557783693        
S/G/Y/R/B/O NT_010783AC015943559759172UT7  1774.451 AC015943
S/G/Y/R/B/O NT_010783AC005951560794553AFM151XA111775.701774.761 AC005951
S/G/Y/R/B/O NT_010783AC090824561937103        
S/G/Y/R/B/O NT_010783AC007485563103133        
S/G/Y/R/B/O NT_010783AC005177565624913AFM095TC51775.701774.991 AC005177
S/G/Y/R/B/O NT_010783AC007638567211773AFMA216XE51775.701774.991 AC007638
S/G/Y/R/B/O NT_010783AC006269567618902        
S/G/Y/R/B/O NT_010783AC034124568528121        
S/G/Y/R/B/O NT_010783AC027567569245242        
S/G/Y/R/B/O NT_010783AC009837569669961        


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC105021570320082        
S/G/Y/R/B/O NT_010783AC091155570953472AFMA046ZG11776.401776.181AC009837, AC009837, AC091155
S/G/Y/R/B/O NT_010783AC090618571772002        
S/G/Y/R/B/O NT_010783AC011073573308393        
S/G/Y/R/B/O NT_010783AC006925574914553        
S/G/Y/R/B/O NT_010783AC006600578295393UT217  1776.181AC015724, AC006600, AC015724
S/G/Y/R/B/O NT_010783AC015724578345653        
S/G/Y/R/B/O NT_010783AC005553580177113        
S/G/Y/R/B/O NT_010783AC068550581023341        
S/G/Y/R/B/O NT_010783AC106858581219152        
S/G/Y/R/B/O NT_010783AC007933581546971        
S/G/Y/R/B/O NT_010783AC015912581674531        
S/G/Y/R/B/O NT_010783AC004584582440393        
S/G/Y/R/B/O NT_010783AC007114583489103        
S/G/Y/R/B/O NT_010783AC003950584886103        
S/G/Y/R/B/O NT_010783AC007644585892411        
S/G/Y/R/B/O NT_010783AC073839585931061        
S/G/Y/R/B/O NT_010783AC073970586187591        
S/G/Y/R/B/O NT_010783AC015909586220182        
S/G/Y/R/B/O NT_010783AC025556587946591        
S/G/Y/R/B/O NT_010783AC091133588022941        
S/G/Y/R/B/O NT_010783AC105030591914542AFM301YE51765.101764.161AC069454, AC104974, AC069454, AC104974, AC105030
S/G/Y/R/B/O NT_010783AC008630588906132        
S/G/Y/R/B/O NT_010783AC068531588993881        
S/G/Y/R/B/O NT_010783AC104974591465192        
S/G/Y/R/B/O NT_010783AC002344592421151        
S/G/Y/R/B/O NT_010783AC091179592607783        
S/G/Y/R/B/O NT_010783AC009789594196003ATC6A06  1766.851 AC009789, AF287967
S/G/Y/R/B/O NT_010783AC009789594541263AFMB010XA51767.601766.851 AC009789, AF287967
S/G/Y/R/B/O NT_010783AC091181595232762        
S/G/Y/R/B/O NT_010783AC015883596300993AFM323WD91781.701780.381 AC015883
S/G/Y/R/B/O NT_010783AC015883596840293UT214  1782.001 AC015883
S/G/Y/R/B/O NT_010783AC015883596976363AFM070YB111784.001782.561 AC015883
S/G/Y/R/B/O NT_010783AC007431597410043AFMB344WE11781.601780.381 AC007431
S/G/Y/R/B/O NT_010783AC007431597602343AFM338XG51781.501780.381 AC007431
S/G/Y/R/B/O NT_010783AC007431597974923UT5608  1780.381 AC007431
S/G/Y/R/B/O NT_010783AC005325598686943        
S/G/Y/R/B/O NT_010783AC069125600151201        
S/G/Y/R/B/O NT_010783AC015845600547501        
S/G/Y/R/B/O NT_010783AC004757602590383        
S/G/Y/R/B/O NT_010783AC005962603662243        
S/G/Y/R/B/O NT_010783AC004687604741043UT6104  1782.001 AC004687
S/G/Y/R/B/O NT_010783AC023992606337803        
S/G/Y/R/B/O NT_010783AC005666606852473        
S/G/Y/R/B/O NT_010783AC011195608009551        
S/G/Y/R/B/O NT_010783AC021455608557131        
S/G/Y/R/B/O NT_010783AC068438608616501        
S/G/Y/R/B/O NT_010783AC025521608857801        
S/G/Y/R/B/O NT_010783AC002401610713843        
S/G/Y/R/B/O NT_010783AC004707612531773        


  NT_010783 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010783AC021491613968443AFM309WF11770.801769.921 AC021491
S/G/Y/R/B/O NT_010783AC021491615246513AFMA306YE11772.701773.621AC004590, AC004590, AC021491
S/G/Y/R/B/O NT_010783AC004590615445873        
S/G/Y/R/B/O NT_010783AC005921616036573        
S/G/Y/R/B/O NT_010783AC091062617663363        
S/G/Y/R/B/O NT_010783AC005920618357833        
S/G/Y/R/B/O NT_010783AC005839620105903        
S/G/Y/R/B/O NT_010783AC006141621369183        
S/G/Y/R/B/O NT_010783AC005823623386663AFM022TF41772.701774.451 AC005823
S/G/Y/R/B/O NT_010783AC005883624279803        
S/G/Y/R/B/O NT_010783AC002090626425653AFMA351WE11772.701771.931 AC002090
S/G/Y/R/B/O NT_010783AC002090626943283AFM269XD11772.701771.931 AC002090
S/G/Y/R/B/O NT_010783AC016473627079553        
S/G/Y/R/B/O NT_010783AC004108627719493AFM319WC11774.501773.621 AC026609
S/G/Y/R/B/O NT_010783AC004108627753573AFM248TB91774.501774.451 AC004108, AC026609, AC073447
S/G/Y/R/B/O NT_010783AC006083628512963        
S/G/Y/R/B/O NT_010783AC026955631407043AFM095ZD111772.701773.621AC105361, AC026955, AC105361
S/G/Y/R/B/O NT_010783AC105361631993363        
S/G/Y/R/B/O NT_010783AC087714632960322        
S/G/Y/R/B/O NT_010783AC009222634929963AFMC023XC51774.501774.451AC024918, AC009222, AC024918
S/G/Y/R/B/O NT_010783AC024918635248273        
S/G/Y/R/B/O NT_010783AC087611636017763        
S/G/Y/R/B/O NT_010783AC067889636223332        
S/G/Y/R/B/O NT_010783AC102948637576893        
S/G/Y/R/B/O NT_010783 - GATA49C09  1782.000  
S/G/Y/R/B/O NT_010783 - UT170  1782.562AC003663, AC069007, AC091132, AC003663, AC069007, AC091132