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  Chromosome 21 - RH Maps - Single Contig
 

Chromosome 21 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029490 NT_011512 NT_030187 NT_030188 NT_011515


  NT_030188
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030188AP001580397952313          
S/G/Y/R/B/O NT_030188AP001618398000543          
S/G/Y/R/B/O NT_030188AP001619398373813RH9323821227.32    1 AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619398497803WI-20893    21232.701 AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619398532893RH8598  211471.00  1 AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619398805393RH4559621225.80    1 AC027485, AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619399516233RH9396321225.80    1 AC027485, AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619399554353RH1958  211509.00  1 AL163290, AP001619, AP001745
S/G/Y/R/B/O NT_030188AP001619399757323SGC44320    21232.001AP001620, AC020557, AL163290, AP001619, AP001620, AP001745
S/G/Y/R/B/O NT_030188AP001619399757323RH5752521264.08    1AP001620, AC020557, AL163290, AP001619, AP001620, AP001745
S/G/Y/R/B/O NT_030188AP001620399813833          
S/G/Y/R/B/O NT_030188AP001621400671623WI-18470    21223.801 AC020557, AL163290, AP001621, AP001745
S/G/Y/R/B/O NT_030188AP001621400671623RH5753221263.63    1 AC020557, AL163290, AP001621, AP001745
S/G/Y/R/B/O NT_030188AP001622401903333RH4807921263.63    1 AB038161, AC015555, AL163291, AP001622, AP001746
S/G/Y/R/B/O NT_030188AP001623402616463RH1698121226.39    1 AB038161, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623402651943RH5755321229.13  21220.701 AC015555, AL163291, AP001623, AP001746, U68704
S/G/Y/R/B/O NT_030188AP001623402688123RH10277921225.80    1 AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623402767363RH520021227.15211515.0021217.201 AB038162, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623403042893WI-5330    21220.801 AB038162, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623403109633RH7587421227.26    1 AB038162, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623403269453SGC35308    21223.101 AB038162, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001623403269453RH5752921266.94    1 AB038162, AC015555, AL163291, AP001623, AP001746
S/G/Y/R/B/O NT_030188AP001624404371453RH5753121229.05211520.0021220.701 AL163291, AP001624, AP001746
S/G/Y/R/B/O NT_030188AP001624404443943RH3590421229.05    1 AL163291, AP001624, AP001746
S/G/Y/R/B/O NT_030188AP001625405371143RH4525821263.52    1 AC064818, AL163292, AP001625, AP001747
S/G/Y/R/B/O NT_030188AP001625405457203WI-17658    21224.501AP001626, AC064818, AL163292, AP001625, AP001626, AP001747
S/G/Y/R/B/O NT_030188AP001625405457203RH5757521266.13    1AP001626, AC064818, AL163292, AP001625, AP001626, AP001747
S/G/Y/R/B/O NT_030188AP001625405462923WI-3570    21219.101AP001626, AC064818, AL163292, AP001625, AP001626, AP001747
S/G/Y/R/B/O NT_030188AP001626405765813          
S/G/Y/R/B/O NT_030188AP001627407401063RH5755521229.05  21220.701AP001628, AB017602, AL163292, AP001627, AP001628, AP001747
S/G/Y/R/B/O NT_030188AP001627407401063RH5759221229.05  21220.701AP001628, AB017602, AL163292, AP001627, AP001628, AP001747
S/G/Y/R/B/O NT_030188AP001628408078883RH9888621227.21    1 AB039887, AL163292, AP001628, AP001747
S/G/Y/R/B/O NT_030188AP001628408080923RH6708321229.05    1 AB039887, AL163292, AP001628, AP001747
S/G/Y/R/B/O NT_030188AP001628408138833WI-13399    21220.701 AB039887, AL163293, AP001628, AP001748
S/G/Y/R/B/O NT_030188AP001628408138833RH5761621239.63    1 AB039887, AL163293, AP001628, AP001748
S/G/Y/R/B/O NT_030188AP001629408708513RH4622021229.05    1 AB038163, AL163293, AP001629, AP001748
S/G/Y/R/B/O NT_030188AP001629408815863RH1708721229.05    1 AL163293, AP001629, AP001748
S/G/Y/R/B/O NT_030188AP001630409297643RH10254921241.10    1 AC020600, AL163293, AP001630, AP001748
S/G/Y/R/B/O NT_030188AP001630409953163WI-16888    21224.501 AC020600, AL163293, AP001630, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630409953163RH5755921266.48    1 AC020600, AL163293, AP001630, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630409977353RH3892321229.05    1 AC020600, AL163293, AP001630, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630409987963RH9233321229.05    1 AC020600, AL163293, AP001630, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630410080383RH4578621229.05    1 AC020600
S/G/Y/R/B/O NT_030188AP001630410120483WI-5232    21220.601AP001631, AC020600, AL163293, AP001630, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630410178493RH8239  211574.00  1AP001631, AC020600, AF042836, AL163293, AP001630, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630410179503RH7922621263.63    1AP001631, AC020600, AF042836, AL163293, AP001630, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630410182403SGC35805    21220.701AP001631, AC020600, AF042836, AL163293, AP001630, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001630410182403RH5752621231.14    1AP001631, AC020600, AF042836, AL163293, AP001630, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001631410608983RH3893221226.39    1 AC020600, AL163293, AP001631, AP001748, AP002085
S/G/Y/R/B/O NT_030188AP001632411526923          


  NT_030188 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030188AP001581411722773          
S/G/Y/R/B/O NT_030188 - RH10192821227.21    0 AL163290, AP001745
S/G/Y/R/B/O NT_030188 - WI-18695    21220.601AP001052, AP001053, AL163297, AP001052, AP001053, AP001752
S/G/Y/R/B/O NT_030188 - AFM067XD7    21220.701AP001051, AC019224, AL163296, AP001051, AP001751
S/G/Y/R/B/O NT_030188 - WI-18985    21223.001AP001046, AC018734, AL163296, AP001046, AP001751
S/G/Y/R/B/O NT_030188 - WI-3679    21226.800