Home    Genome Browser    BLAT Search    Help
  Chromosome Y - RH Maps - Single Contig
 

Chromosome Y - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011896 NT_011878 NT_011875 NT_011903 NT_025975 NT_025441


  NT_011875
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011875AC011293131093323          
S/G/Y/R/B/O NT_011875AC012502132688543          
S/G/Y/R/B/O NT_011875AC011302133824533          
S/G/Y/R/B/O NT_011875AC013735135603903          
S/G/Y/R/B/O NT_011875AC004772136393413          
S/G/Y/R/B/O NT_011875AC005942137123203          
S/G/Y/R/B/O NT_011875AC002992137522943RH47908292.23    5AC005820, AC010896, AC021987, AC093378, AP003385, AC002992, AC005820, AC010896, AC021987, AC069046, AC079992, AC093378, AC099333, AF290421, AF290422, AF290423, AP003385
S/G/Y/R/B/O NT_011875AC002992138706373RH4483610380.97    5AC004617, AC023670, AC037447, AC002992, AC004617, AC023670, AC037447, AC073131, AC108717
S/G/Y/R/B/O NT_011875AC004617138896263          
S/G/Y/R/B/O NT_011875AC004810140356473          
S/G/Y/R/B/O NT_011875AC002531141201453          
S/G/Y/R/B/O NT_011875AC004474143160453          
S/G/Y/R/B/O NT_011875AC006565144201313          
S/G/Y/R/B/O NT_011875AC005820145517263RH47908292.23    5AC002992, AC010896, AC021987, AC093378, AP003385, AC002992, AC005820, AC010896, AC021987, AC069046, AC079992, AC093378, AC099333, AF290421, AF290422, AF290423, AP003385
S/G/Y/R/B/O NT_011875AC010877146239193          
S/G/Y/R/B/O NT_011875AC006376147609483          
S/G/Y/R/B/O NT_011875AC007004149327553          
S/G/Y/R/B/O NT_011875AC006383149685153          
S/G/Y/R/B/O NT_011875AC006371150735253          
S/G/Y/R/B/O NT_011875AC006370152756793          
S/G/Y/R/B/O NT_011875AC018677154486253          
S/G/Y/R/B/O NT_011875AC010720155515333          
S/G/Y/R/B/O NT_011875AC010723155882773          
S/G/Y/R/B/O NT_011875AC019191157624973          
S/G/Y/R/B/O NT_011875AC010726157906413          
S/G/Y/R/B/O NT_011875AC010979159669653          
S/G/Y/R/B/O NT_011875AC010879160761593          
S/G/Y/R/B/O NT_011875AC017032162578803          
S/G/Y/R/B/O NT_011875AC006989163028033          
S/G/Y/R/B/O NT_011875AC011289164602693          
S/G/Y/R/B/O NT_011875AC010972165406063          
S/G/Y/R/B/O NT_011875AC007007166550433          
S/G/Y/R/B/O NT_011875AC006998167126623          
S/G/Y/R/B/O NT_011875AC006382168567223          
S/G/Y/R/B/O NT_011875AC006462170193323          
S/G/Y/R/B/O NT_011875AC006336171591263          
S/G/Y/R/B/O NT_011875AC016671172548823          
S/G/Y/R/B/O NT_011875AC017020172741193          
S/G/Y/R/B/O NT_011875AC011749174403223          
S/G/Y/R/B/O NT_011875AC053516176451753          
S/G/Y/R/B/O NT_011875AC010135176722893          
S/G/Y/R/B/O NT_011875AC010128178490403          
S/G/Y/R/B/O NT_011875AC011751179116263          
S/G/Y/R/B/O NT_011875AC016678180911413          
S/G/Y/R/B/O NT_011875AC015979182339233          
S/G/Y/R/B/O NT_011875AC007034182559353          
S/G/Y/R/B/O NT_011875AC007043184049333          
S/G/Y/R/B/O NT_011875AC006999185121353          
S/G/Y/R/B/O NT_011875AC007042186248133          
S/G/Y/R/B/O NT_011875AC091329186315203          


  NT_011875 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011875AC007972186687653          
S/G/Y/R/B/O NT_011875AC015978187968543          
S/G/Y/R/B/O NT_011875AC068704189754343          
S/G/Y/R/B/O NT_011875AC007742189902363          
S/G/Y/R/B/O NT_011875AC095381191892103          
S/G/Y/R/B/O NT_011875AC009976192195213          
S/G/Y/R/B/O NT_011875AC095380193985753          
S/G/Y/R/B/O NT_011875AC024183194438043          
S/G/Y/R/B/O NT_011875AC007241196072933          
S/G/Y/R/B/O NT_011875AC069130197689613          
S/G/Y/R/B/O NT_011875AC073962198356353          
S/G/Y/R/B/O NT_011875AC068541198421493          
S/G/Y/R/B/O NT_011875AC022486198795153          
S/G/Y/R/B/O NT_011875AC007379200356723          
S/G/Y/R/B/O NT_011875AC009235203589473RH667956460.76    2AC016916, AC068407, AC009235, AC016916, AC068407, AC091497
S/G/Y/R/B/O NT_011875AC007244203692643          
S/G/Y/R/B/O NT_011875AC021210205540413          
S/G/Y/R/B/O NT_011875AC010133206173003          
S/G/Y/R/B/O NT_011875AC012062207691743          
S/G/Y/R/B/O NT_011875AC010137208113693          
S/G/Y/R/B/O NT_011875AC009977209348703          
S/G/Y/R/B/O NT_011875AC010889209663413          
S/G/Y/R/B/O NT_011875AC010151211462653          
S/G/Y/R/B/O NT_011875AC009233212178863          
S/G/Y/R/B/O NT_011875AC079157214131253          
S/G/Y/R/B/O NT_011875AC079261215241593          
S/G/Y/R/B/O NT_011875AC079156215743693          
S/G/Y/R/B/O NT_011875AC024250215917543          
S/G/Y/R/B/O NT_011875AC009240216352773          
S/G/Y/R/B/O NT_011875AC011745217363673          
S/G/Y/R/B/O NT_011875AC007678218856923          
S/G/Y/R/B/O NT_011875AC009494221597713RH10236512404.26    1  
S/G/Y/R/B/O NT_011875AC026061221827793          
S/G/Y/R/B/O NT_011875AC009489222021213          
S/G/Y/R/B/O NT_011875AC007876223028743          
S/G/Y/R/B/O NT_011875AC009239224675533          
S/G/Y/R/B/O NT_011875AC010086226037243          
S/G/Y/R/B/O NT_011875AC010141227744593          
S/G/Y/R/B/O NT_011875AC021107228955173