Home    Genome Browser    BLAT Search    Help
  Chromosome 10 - YAC Map - Single Contig
 

Chromosome 10 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008769
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008769AL683834905608831D10S176910321.001AC079955, AC079955, AL683834
S/G/Y/R/B/O NT_008769AL683834906148571D10S169810320.001AC021034, AC021034, AL683834
S/G/Y/R/B/O NT_008769AC021034906863901WI-324610322.001 AC021034
S/G/Y/R/B/O NT_008769AC026227903397331      
S/G/Y/R/B/O NT_008769AC021042903634491      
S/G/Y/R/B/O NT_008769AC079955903863763      
S/G/Y/R/B/O NT_008769AL136982907287023      
S/G/Y/R/B/O NT_008769AL645992909116612      
S/G/Y/R/B/O NT_008769AL157893910545692      
S/G/Y/R/B/O NT_008769AL645612911186772      
S/G/Y/R/B/O NT_008769AL355334911394163      
S/G/Y/R/B/O NT_008769AL138767913128063      
S/G/Y/R/B/O NT_008769AL133327914330363D10S57910325.001 AC006191, AL133327
S/G/Y/R/B/O NT_008769AL133327914688353D10S21510326.001 AL133327
S/G/Y/R/B/O NT_008769AC022016916822223AFMA086WG910327.001AC063965, AC022016, AC063965, AF067844, AF143316
S/G/Y/R/B/O NT_008769AC063965917080103      
S/G/Y/R/B/O NT_008769AL356142918115243      
S/G/Y/R/B/O NT_008769AL356073919945013D10S54110328.001 AL356073, AP001849
S/G/Y/R/B/O NT_008769AL353149920164593      
S/G/Y/R/B/O NT_008769AL365185920789183      
S/G/Y/R/B/O NT_008769AL139406923234723AFM280WE110329.001 AC012259, AL139406
S/G/Y/R/B/O NT_008769AL358532924101513      
S/G/Y/R/B/O NT_008769AL353113925699773      
S/G/Y/R/B/O NT_008769AL157394926859723WI-1027510330.001 AC015461, AL157394
S/G/Y/R/B/O NT_008769AL157394926979583WI-873310331.001 AC015461, AL157394
S/G/Y/R/B/O NT_008769AL157394927772163WI-697110332.001 AL157394, X82286
S/G/Y/R/B/O NT_008769AL391318928151123D10S173910333.001 AL391318
S/G/Y/R/B/O NT_008769AL513533928400731      
S/G/Y/R/B/O NT_008769AL353751929839602      
S/G/Y/R/B/O NT_008769AL353146931648813WI-607510334.001 AC060826, AL353146
S/G/Y/R/B/O NT_008769AL355342932782513      
S/G/Y/R/B/O NT_008769AL157400933300243      
S/G/Y/R/B/O NT_008769AL157389935365463WI-921710335.001 AL157389
S/G/Y/R/B/O NT_008769AL138924936086873      
S/G/Y/R/B/O NT_008769AL390206936607103      
S/G/Y/R/B/O NT_008769AL139340939439563WI-426410336.001 AL139340
S/G/Y/R/B/O NT_008769AL157836939570653      
S/G/Y/R/B/O NT_008769AL359919941505503AFMA048WB910337.001 AL359919
S/G/Y/R/B/O NT_008769AL391704942127573AFM225YD1210338.001 AL391704
S/G/Y/R/B/O NT_008769AL391704943674313CHLC.GATA66C0410339.001AL390862, AC079844, AL390862, AL391704
S/G/Y/R/B/O NT_008769AL390862944155833AFMA114XB110340.001 AL390862
S/G/Y/R/B/O NT_008769AL390862944156543D10S175310341.001 AL390862
S/G/Y/R/B/O NT_008769AL360011946024113D10S56410342.001 AL360011
S/G/Y/R/B/O NT_008769AL590622946341933      
S/G/Y/R/B/O NT_008769AL365434946842043      
S/G/Y/R/B/O NT_008769AC011170948998861      
S/G/Y/R/B/O NT_008769AC074094949374531      
S/G/Y/R/B/O NT_008769AC023902949680103      
S/G/Y/R/B/O NT_008769AL161798951511163      
S/G/Y/R/B/O NT_008769AL359986952855542      


  NT_008769 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008769AL359707955263783WI-67401833.002AC099066, AC058782, AC099066, AL359707
S/G/Y/R/B/O NT_008769AL359707955851853IB331110344.001 AL359707
S/G/Y/R/B/O NT_008769AL359707955853503WI-833910345.001 AL359707
S/G/Y/R/B/O NT_008769AL359198955967583      
S/G/Y/R/B/O NT_008769AL365398957111003      
S/G/Y/R/B/O NT_008769AL158040958043983      
S/G/Y/R/B/O NT_008769AL161652960160423      
S/G/Y/R/B/O NT_008769AL356128961745823D10S214110346.001 AL356128
S/G/Y/R/B/O NT_008769AL356128963294713D10S58310347.001 AL356128
S/G/Y/R/B/O NT_008769AL360222963617523      
S/G/Y/R/B/O NT_008769AL590080964439063D10S175510348.001 AL590080
S/G/Y/R/B/O NT_008769AL392103965748203      
S/G/Y/R/B/O NT_008769AL157705966979073      
S/G/Y/R/B/O NT_008769AL358613967726703      
S/G/Y/R/B/O NT_008769AL159171968028173      
S/G/Y/R/B/O NT_008769AL365364969689623      
S/G/Y/R/B/O NT_008769AL360229971486663D10S18510350.001 AC073083, AL137223, AL360229
S/G/Y/R/B/O NT_008769AL356214972742233D10S20010352.001 AC073083, AL356214
S/G/Y/R/B/O NT_008769AL157396973681163      
S/G/Y/R/B/O NT_008769AL358154975180003IB109910351.001 AL358154
S/G/Y/R/B/O NT_008769AL138923975536753      
S/G/Y/R/B/O NT_008769AL365510976369973      
S/G/Y/R/B/O NT_008769AL139118978257183WI-118310357.001 AC073038, AL139118
S/G/Y/R/B/O NT_008769AL389885979248513CHLC.GGAA2F1110356.001 AL389885
S/G/Y/R/B/O NT_008769AL389885979248513CHLC.GGAA2E0310354.001 AL389885
S/G/Y/R/B/O NT_008769AL389885979551503D10S169010355.001 AL389885
S/G/Y/R/B/O NT_008769AL139124980484053NIB168610353.001AL355341, AL139124, AL355341
S/G/Y/R/B/O NT_008769AL355341980499813      
S/G/Y/R/B/O NT_008769AL138759982014303      
S/G/Y/R/B/O NT_008769AL157835983924503      
S/G/Y/R/B/O NT_008769AL583836984000923      
S/G/Y/R/B/O NT_008769AL133513985132693      
S/G/Y/R/B/O NT_008769AL359672986510132      
S/G/Y/R/B/O NT_008769AL157834987921933      
S/G/Y/R/B/O NT_008769AL160288989805873      
S/G/Y/R/B/O NT_008769AL158165990989463D10S57110358.001 AL158165
S/G/Y/R/B/O NT_008769AL157890991949493      
S/G/Y/R/B/O NT_008769AL356632993837133WI-963410359.001 AL356632
S/G/Y/R/B/O NT_008769AL365273994497961      
S/G/Y/R/B/O NT_008769AL513355997128633WI-483910360.001 AL513355
S/G/Y/R/B/O NT_008769AL356155997815643IB325910361.001 AL356155
S/G/Y/R/B/O NT_008769AC021037999944113WI-301110362.001 AC021037
S/G/Y/R/B/O NT_008769AL3910571000019993      
S/G/Y/R/B/O NT_008769AL1361811000606163D10S214010363.001AL391136, AL136181, AL391136
S/G/Y/R/B/O NT_008769AL3911361002029192WI-205410364.001 AL391136
S/G/Y/R/B/O NT_008769AL1387651002405013STSG-994610365.001 AL138765
S/G/Y/R/B/O NT_008769AL1387651003260063D10S57410370.001 AL138765
S/G/Y/R/B/O NT_008769AL1387651003633693D10S173610368.001 AL138765
S/G/Y/R/B/O NT_008769AL5913641003739163      
S/G/Y/R/B/O NT_008769AL3582351004157243CHLC.GGAT2H0110367.001 AL358235


  NT_008769 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008769AL1625021004983193      
S/G/Y/R/B/O NT_008769AL4421231006708823WI-591510369.001 AL442123
S/G/Y/R/B/O NT_008769AL4421231007411693CHLC.GAAT4C0110366.001  
S/G/Y/R/B/O NT_008769AL5124241007545982      
S/G/Y/R/B/O NT_008769AL3593851009251083      
S/G/Y/R/B/O NT_008769AL3554901010343963D10S57710371.001 AL355490
S/G/Y/R/B/O NT_008769AL3554901011553153NIB146712345.004AC012085, AC013776, AC023550, AC078819, AC084199, AC084359, AL359388, AC012085, AC013776, AC023550, AC026109, AC078819, AC084199, AC084359, AC107017, AL355490, AL359388
S/G/Y/R/B/O NT_008769 - WI-987410323.002AL132656, AL589794, AC010194, AL132656, AL589794
S/G/Y/R/B/O NT_008769 - D10S168710324.000 AC025268
S/G/Y/R/B/O NT_008769 - D10S58010343.001AC012048, AC013286, AC012048, AC013286, AL136103
S/G/Y/R/B/O NT_008769 - WI-766710349.001Z83840, Z83840