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  Chromosome 10 - YAC Map - Single Contig
 

Chromosome 10 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_030059
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030059AL3593881036693551NIB146712345.004AC012085, AC013776, AC023550, AC078819, AC084199, AC084359, AL355490, AC012085, AC013776, AC023550, AC026109, AC078819, AC084199, AC084359, AC107017, AL355490, AL359388
S/G/Y/R/B/O NT_030059AL3553151037678503      
S/G/Y/R/B/O NT_030059AL3589381039250433      
S/G/Y/R/B/O NT_030059AL1392391040691693      
S/G/Y/R/B/O NT_030059AL3553011042284083      
S/G/Y/R/B/O NT_030059AL1392411044946243CHLC.GATA87G0210373.001 AL139241
S/G/Y/R/B/O NT_030059AL1392411044966613WI-420910374.001 AL139241
S/G/Y/R/B/O NT_030059AL1392411045174923WI-998510372.001 AL139241
S/G/Y/R/B/O NT_030059AL1392431045519383      
S/G/Y/R/B/O NT_030059AL3562681046953013      
S/G/Y/R/B/O NT_030059AL3562201048206823      
S/G/Y/R/B/O NT_030059AL3912601049585343      
S/G/Y/R/B/O NT_030059AL3600751051487633D10S172610375.001 AL360075
S/G/Y/R/B/O NT_030059AL5900361051662583      
S/G/Y/R/B/O NT_030059AL3652101053613613      
S/G/Y/R/B/O NT_030059AL4452511054377033FB14A110377.001 AL442004, AL445251
S/G/Y/R/B/O NT_030059AL3916841055172053D10S19810378.001 AL391684
S/G/Y/R/B/O NT_030059AL3916841055935233WI-803910379.001 AL391684
S/G/Y/R/B/O NT_030059AL5135421056823843      
S/G/Y/R/B/O NT_030059AL3537191058071483WI-818210376.001 AL353719
S/G/Y/R/B/O NT_030059AL1333531058481633      
S/G/Y/R/B/O NT_030059AL3921071060072672      
S/G/Y/R/B/O NT_030059AL6274341060982293      
S/G/Y/R/B/O NT_030059AL4418861061505433      
S/G/Y/R/B/O NT_030059AL1389211062844752      
S/G/Y/R/B/O NT_030059AL1398191064941313D10S60310383.001 AC018783, AL139819
S/G/Y/R/B/O NT_030059AL1398191065598433WI-967010382.001 AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_030059AL1398191065611523IB29310385.001 AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_030059AL3597591065906693      
S/G/Y/R/B/O NT_030059AL3917231066616471      
S/G/Y/R/B/O NT_030059AL1333521067648571D10S126610384.001 AL133352, AL390720
S/G/Y/R/B/O NT_030059AL3600011068175633      
S/G/Y/R/B/O NT_030059AL5914081068994603WI-675010390.001 AL591408
S/G/Y/R/B/O NT_030059AL6039831070318823      
S/G/Y/R/B/O NT_030059AL1393391070338763      
S/G/Y/R/B/O NT_030059AL1219291071357023      
S/G/Y/R/B/O NT_030059AL1333551073388643      
S/G/Y/R/B/O NT_030059AL3601701075296463      
S/G/Y/R/B/O NT_030059AL1387611076261383WI-486510394.001 AL138761
S/G/Y/R/B/O NT_030059AL3573361077278693      
S/G/Y/R/B/O NT_030059AL1393411077805963      
S/G/Y/R/B/O NT_030059AL1627421080083753D10S54010395.001 AL162742
S/G/Y/R/B/O NT_030059AL3553781080613023      
S/G/Y/R/B/O NT_030059AL1616461080787943      
S/G/Y/R/B/O NT_030059AL3553501082625273      
S/G/Y/R/B/O NT_030059AL5899421083186013      
S/G/Y/R/B/O NT_030059AL4454921083375393      
S/G/Y/R/B/O NT_030059AL3589491086134783WI-998710398.001 AC073303, AC073997, AL358949
S/G/Y/R/B/O NT_030059AL3654491086512423      
S/G/Y/R/B/O NT_030059AL3539001087017583D10S167110397.001 AC073997


  NT_030059 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030059AL5961181088458373      
S/G/Y/R/B/O NT_030059AL4503631089615743WI-310910396.001 AL450363
S/G/Y/R/B/O NT_030059AC0262251091665873WI-985010399.001AC026226, AC026225, AC026226
S/G/Y/R/B/O NT_030059AL5913631092532493      
S/G/Y/R/B/O NT_030059AL4504661093702433D10S53010401.001 AL450466
S/G/Y/R/B/O NT_030059AL4504661094035753AFMB334YC510400.001 AL450466
S/G/Y/R/B/O NT_030059AC0689221094147941      
S/G/Y/R/B/O NT_030059AC0189441095259631      
S/G/Y/R/B/O NT_030059AL5891661095543163      
S/G/Y/R/B/O NT_030059AL3581961096079363      
S/G/Y/R/B/O NT_030059AL3531481098426173D10S56610403.001AC018944, AC018944, AL353148
S/G/Y/R/B/O NT_030059AL1577101098564683      
S/G/Y/R/B/O NT_030059AC0733691099174853      
S/G/Y/R/B/O NT_030059AL3598471100303583      
S/G/Y/R/B/O NT_030059AL1333951103158123WI-437910404.001 AL133395
S/G/Y/R/B/O NT_030059AL3573331103541963      
S/G/Y/R/B/O NT_030059AL3562551104392353      
S/G/Y/R/B/O NT_030059AL1600101106005133D10S166310405.001 AL160010
S/G/Y/R/B/O NT_030059AL3563081107100993      
S/G/Y/R/B/O NT_030059AL3564391108110093      
S/G/Y/R/B/O NT_030059AL3575101109258233CHLC.GATA88F0810410.001 AL357510
S/G/Y/R/B/O NT_030059AL3575101109757193CHLC.GATA8B0810407.001 AL357510
S/G/Y/R/B/O NT_030059AL3575101109826863D10S174110406.001 AL357510
S/G/Y/R/B/O NT_030059AC0220241110938413D10S53410409.001 AC013757, AC022024
S/G/Y/R/B/O NT_030059AC0220241111352593D10S179510408.001 AC013757, AC022024
S/G/Y/R/B/O NT_030059AC0210391111723183      
S/G/Y/R/B/O NT_030059AC0189761114770213WI-190510411.001 AC009386, AC018976
S/G/Y/R/B/O NT_030059AL1622731114799533      
S/G/Y/R/B/O NT_030059AL3552751115809643      
S/G/Y/R/B/O NT_030059AL4452401116733743      
S/G/Y/R/B/O NT_030059AL3908341118261723      
S/G/Y/R/B/O NT_030059AL3553841119526933AFMB328WD110412.001 AC026195, AL161745, AL355384
S/G/Y/R/B/O NT_030059AL3537401121273353WI-116610413.001 AC024118, AL353740
S/G/Y/R/B/O NT_030059AL5900721122049313      
S/G/Y/R/B/O NT_030059AL3564761123153763      
S/G/Y/R/B/O NT_030059AC0691191124978861      
S/G/Y/R/B/O NT_030059AC0241171125169551      
S/G/Y/R/B/O NT_030059AL7139691125228531      
S/G/Y/R/B/O NT_030059AC0838531125661811      
S/G/Y/R/B/O NT_030059AC0371941125738451      
S/G/Y/R/B/O NT_030059AC0223731125815091      
S/G/Y/R/B/O NT_030059AC0266861125907181      
S/G/Y/R/B/O NT_030059AL6070821126218733WI-61010415.001AC037194, AC083853, AL713969, AC037194, AC083853, AL607082, AL713969
S/G/Y/R/B/O NT_030059AL1577871127055143AFMA071XH110414.001 AL157787
S/G/Y/R/B/O NT_030059AL1387661128240053CHLC.GGAA22D1210417.001AC026686, AC018826, AC025915, AC026686, AL138766
S/G/Y/R/B/O NT_030059AL1387661128495783WI-443410416.001AC026686, AC018826, AC026390, AC026686, AL138766
S/G/Y/R/B/O NT_030059AL1577851129018533      
S/G/Y/R/B/O NT_030059AL3553321131035282D10S59710418.001 AC026989, AL355332
S/G/Y/R/B/O NT_030059AL5899481131290333      
S/G/Y/R/B/O NT_030059AL3901231133713793AFMA053YG510419.001 AL390123


  NT_030059 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030059AL1334161133823943      
S/G/Y/R/B/O NT_030059AL3549511134218433      
S/G/Y/R/B/O NT_030059AL1626131136251723      
S/G/Y/R/B/O NT_030059AL5906281137117543D10S54310425.001 AL590628
S/G/Y/R/B/O NT_030059AL5906281137519223WI-92610426.001 AL590628
S/G/Y/R/B/O NT_030059AL3601821139174893WI-933610424.001 AL360182, U32515
S/G/Y/R/B/O NT_030059AL3555121139718623AFMC021WD910420.001 AC021040, AL355512
S/G/Y/R/B/O NT_030059AL3555121141429713WI-936910423.001 AL355512
S/G/Y/R/B/O NT_030059AL3592601142644093CHLC.ATC310421.001 AL359260
S/G/Y/R/B/O NT_030059AL3592601142875323WI-1121510422.001 AL359260
S/G/Y/R/B/O NT_030059AL5125081143086043      
S/G/Y/R/B/O NT_030059AL1363681143811273      
S/G/Y/R/B/O NT_030059AL1581631147131112NIB135710428.001 AL158163
S/G/Y/R/B/O NT_030059AL3558631148395253WI-413210427.001 AL355863
S/G/Y/R/B/O NT_030059AC0210351148700943      
S/G/Y/R/B/O NT_030059AL6708431150196851      
S/G/Y/R/B/O NT_030059AC0687091150962451      
S/G/Y/R/B/O NT_030059AL3561411152059243      
S/G/Y/R/B/O NT_030059AL3567721152937953      
S/G/Y/R/B/O NT_030059AL1361191154556563      
S/G/Y/R/B/O NT_030059AL3921671155823183D10S176010432.001 AL392167
S/G/Y/R/B/O NT_030059AL3921671157131463CHLC.GGAA3B0210431.001 AL392167
S/G/Y/R/B/O NT_030059AL3593951157350063      
S/G/Y/R/B/O NT_030059AL3919861159094923FB3F310433.001 AL391986
S/G/Y/R/B/O NT_030059AL1577861160226503CHLC.GATA83D0510429.001 AL157786
S/G/Y/R/B/O NT_030059AC0220181160623641WI-692510430.001 AC022018
S/G/Y/R/B/O NT_030059AL5122701162017563      
S/G/Y/R/B/O NT_030059AL1391201163051113WI-443610434.001 AC016421, AL139120, AL445221
S/G/Y/R/B/O NT_030059AL1391201163270273CHLC.GGAT3D0610435.001 AC016421, AL139120, AL445221
S/G/Y/R/B/O NT_030059AL1333231163946563D10S126910439.001 AL133323
S/G/Y/R/B/O NT_030059AL1582121164591582WI-944810436.001 AL158162, AL158212
S/G/Y/R/B/O NT_030059AL1582121165011532WI-597610438.001 AL158162, AL158212
S/G/Y/R/B/O NT_030059AL1582121165047532AFM265YC910437.001 AL158162, AL158212
S/G/Y/R/B/O NT_030059AL1582121165910842WI-746710443.001 AL158162, AL158212
S/G/Y/R/B/O NT_030059AL4454861166150423WI-246910440.001 AL445486
S/G/Y/R/B/O NT_030059AL4454861166186053D10S16810441.001 AL445486
S/G/Y/R/B/O NT_030059AL1357921167082743      
S/G/Y/R/B/O NT_030059AL4510841169252273WI-565310442.001 AL451084
S/G/Y/R/B/O NT_030059AL3570421169414693      
S/G/Y/R/B/O NT_030059AL1334821170548173      
S/G/Y/R/B/O NT_030059AL3901971172036443WI-973410444.001 AC006097, AL390197
S/G/Y/R/B/O NT_030059AL6273951173070811      
S/G/Y/R/B/O NT_030059AL5925461174752412AFM310ZG910446.001 AL592546
S/G/Y/R/B/O NT_030059AL6274291175070473      
S/G/Y/R/B/O NT_030059AL1624071175938263AFMB361WB910445.001 AC005870, AC005886
S/G/Y/R/B/O NT_030059AL3555431176406133      
S/G/Y/R/B/O NT_030059AC0220231178195223      
S/G/Y/R/B/O NT_030059AC0053831179039863D10S55410448.001 AC005383
S/G/Y/R/B/O NT_030059AC0053831179276123WI-686810449.001 AC005383
S/G/Y/R/B/O NT_030059AC0053831179458093D10S168110450.001 AC005383


  NT_030059 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030059 - AFM277XE110380.001AL355809, AL355809
S/G/Y/R/B/O NT_030059 - WI-848810381.000AL133353, AL392107, AL133353, AL392107
S/G/Y/R/B/O NT_030059 - D10S126510386.001AL138762, AL138762
S/G/Y/R/B/O NT_030059 - D10S171010387.001AL133215, AL133215
S/G/Y/R/B/O NT_030059 - D10S19210388.000 AL390720, AL589862
S/G/Y/R/B/O NT_030059 - WI-590510389.000 AL390720, AL589862
S/G/Y/R/B/O NT_030059 - WI-693810391.001AL358790, AC009144, AL358790
S/G/Y/R/B/O NT_030059 - AFM183XB1210392.001AL356420, AL356420
S/G/Y/R/B/O NT_030059 - D10S169710393.001AL391121, AL391121
S/G/Y/R/B/O NT_030059 - WI-969010402.004AL133395, AL133395
S/G/Y/R/B/O NT_030059 - WI-736910447.001AL133384, AL133384