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  Chromosome 11 - YAC Map - Single Contig
 

Chromosome 11 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_033899
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AC0168491185005001      
S/G/Y/R/B/O NT_033899AC0678231185377821      
S/G/Y/R/B/O NT_033899AC0189971185481391      
S/G/Y/R/B/O NT_033899AP0019941185562633      
S/G/Y/R/B/O NT_033899AP0013601188464783WI-730211433.001AC018997, AC018997, AC080163, AP001360, AP002394
S/G/Y/R/B/O NT_033899AP0013601188555053D11S52811432.001AC018997, AP000679, AC018997, AP000679, AP001360, AP002394
S/G/Y/R/B/O NT_033899AP0006791188999363      
S/G/Y/R/B/O NT_033899AP0011501189961163AFMB031WC911435.001 AP001150
S/G/Y/R/B/O NT_033899AP0006591191228033      
S/G/Y/R/B/O NT_033899AP0007581192203643WI-880311434.001 AC016034, AP000758
S/G/Y/R/B/O NT_033899AP0023481193790653AFMB048ZA911437.001 AP002348
S/G/Y/R/B/O NT_033899AP0007961194560793CHLC.GAAT12H0811436.001 AP000796, AP002456, AP004246
S/G/Y/R/B/O NT_033899AP0041471195550593D11S177411439.001 AP004147, AP004246
S/G/Y/R/B/O NT_033899AP0019291196926503D11S92511438.001 AP000667, AP001929
S/G/Y/R/B/O NT_033899AP0006461198540633D11S408911441.001 AP000646, AP001806
S/G/Y/R/B/O NT_033899AP0008261199134463D11S410711440.001 AP000826, AP000881
S/G/Y/R/B/O NT_033899AP0008261199474163AFM362TA911442.001 AP000826, AP000881, AP001806
S/G/Y/R/B/O NT_033899AP0011241200442463NIB94711443.001AP002959, AC010929, AP001124, AP002959
S/G/Y/R/B/O NT_033899AP0029591200494443      
S/G/Y/R/B/O NT_033899AP0023651201733003      
S/G/Y/R/B/O NT_033899AP0009771201844473      
S/G/Y/R/B/O NT_033899AP0006641203691853IB233111444.001 AC027014, AP000664
S/G/Y/R/B/O NT_033899AP0019771204556443      
S/G/Y/R/B/O NT_033899AP0019821205909833      
S/G/Y/R/B/O NT_033899AP0019241207210763      
S/G/Y/R/B/O NT_033899AP0013591208769183FB17D411445.001AP001924, AC009544, AP000666, AP000674, AP001163, AP001359, AP001384, AP001924
S/G/Y/R/B/O NT_033899AP0007551210162943D11S416711446.001 AC009544, AP000755
S/G/Y/R/B/O NT_033899AP0018351211023803D11S415711447.001AP001936, AP000891, AP001835, AP001936
S/G/Y/R/B/O NT_033899AP0018351211224103WI-328111449.001AP001936, AP000891, AP001835, AP001936
S/G/Y/R/B/O NT_033899AP0018351211637583D11S134511448.002AP001936, AC018619, AC019303, AP001835, AP001936
S/G/Y/R/B/O NT_033899AP0030421211980313      
S/G/Y/R/B/O NT_033899AP0024691213078633      
S/G/Y/R/B/O NT_033899AP0027621214506473WI-199611452.001AC067823, AC067823, AP002762
S/G/Y/R/B/O NT_033899AP0027621215049853D11S133611451.001 AC069316, AP002762
S/G/Y/R/B/O NT_033899AP0043181215767083WI-993811450.001 AC069316, AP004318
S/G/Y/R/B/O NT_033899AP0030401217013163      
S/G/Y/R/B/O NT_033899AP0008251217617671      
S/G/Y/R/B/O NT_033899AC0217041217669851      
S/G/Y/R/B/O NT_033899AP0009261217802803      
S/G/Y/R/B/O NT_033899AP0019701219772533      
S/G/Y/R/B/O NT_033899AP0017821221777113D11S409411455.001AP000783, AP000783, AP001782
S/G/Y/R/B/O NT_033899AP0007831221813203D11S93611454.001 AC080039
S/G/Y/R/B/O NT_033899AP0007831221918043D11S135311453.001 AP000783
S/G/Y/R/B/O NT_033899AP0008411223187033D11S414411456.001AP002765, AC063921, AC080039, AP000841, AP002765, U73644
S/G/Y/R/B/O NT_033899AP0027651223595083D11S131611457.001 AC021981, AC063921, AP002749
S/G/Y/R/B/O NT_033899AP0027651223873733IB41411458.001 AC021981, AC024604, AC063921, AC069539, AP000682, AP002765
S/G/Y/R/B/O NT_033899AP0027651224167243WI-574211459.001 AC021981, AC024604, AC063921, AC069539, AP000682, AP002749, AP002765
S/G/Y/R/B/O NT_033899AP0008681224829903      
S/G/Y/R/B/O NT_033899AP0024071226454283      
S/G/Y/R/B/O NT_033899AP0018841228169493      


  NT_033899 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AP0008181229151633D11S132811460.001 AP000818
S/G/Y/R/B/O NT_033899AP0029651229756573      
S/G/Y/R/B/O NT_033899AC0025561231760153D11S175211461.001AP000916, AC002556, AC083958, AP000916, AP001804
S/G/Y/R/B/O NT_033899AP0009161231905313      
S/G/Y/R/B/O NT_033899AP0015241233648333      
S/G/Y/R/B/O NT_033899AP0008901234332403      
S/G/Y/R/B/O NT_033899AP0008661235594473D11S93311462.001AP000680, AP000680, AP000866
S/G/Y/R/B/O NT_033899AP0035011236267083      
S/G/Y/R/B/O NT_033899AP0031721238116573D11S415811464.001 AP003172
S/G/Y/R/B/O NT_033899AP0010071238680463WI-293211463.001 AP001007
S/G/Y/R/B/O NT_033899AP0030611240436463      
S/G/Y/R/B/O NT_033899AP0030691241437963      
S/G/Y/R/B/O NT_033899AP0007081242394393      
S/G/Y/R/B/O NT_033899AP0014941243028973      
S/G/Y/R/B/O NT_033899AP0011321244295993WI-784111465.001 AC009639, AP000801, AP000840, AP001132, AP001185
S/G/Y/R/B/O NT_033899AP0030871245342973      
S/G/Y/R/B/O NT_033899AP0008421245949933      
S/G/Y/R/B/O NT_033899AP0008211247743623      
S/G/Y/R/B/O NT_033899AP0018931249096233      
S/G/Y/R/B/O NT_033899AC0918521249791552      
S/G/Y/R/B/O NT_033899AC0840781249949421      
S/G/Y/R/B/O NT_033899AC0212221250242051      
S/G/Y/R/B/O NT_033899AP0030411250263701      
S/G/Y/R/B/O NT_033899AP0008531250791691      
S/G/Y/R/B/O NT_033899AC0791231250913071      
S/G/Y/R/B/O NT_033899AC0251201251029081      
S/G/Y/R/B/O NT_033899AP0034831251092041      
S/G/Y/R/B/O NT_033899AP0033261251269753      
S/G/Y/R/B/O NT_033899AP0033271252086843GCT17D1111478.002AC010290, AC079123, AP003326, AC010290, AC079123, AP000686, AP003326, AP003327
S/G/Y/R/B/O NT_033899AP0033271252193223NIB169911475.002AC010290, AC079123, AC010290, AC079123, AP000686, AP003327
S/G/Y/R/B/O NT_033899AP0033271252194903WI-955211477.002AC010290, AC079123, AC010290, AC079123, AP000686, AP003327
S/G/Y/R/B/O NT_033899AC0105831252553283      
S/G/Y/R/B/O NT_033899AP0035001255894793WI-988411479.001AC025120, AP003782, AC025120, AP003500, AP003782
S/G/Y/R/B/O NT_033899AP0037821256001103      
S/G/Y/R/B/O NT_033899AP0037751256396553      
S/G/Y/R/B/O NT_033899AP0028861258057403      
S/G/Y/R/B/O NT_033899AC0155921259046863      
S/G/Y/R/B/O NT_033899AP0007511259983413      
S/G/Y/R/B/O NT_033899AP0009201261694733      
S/G/Y/R/B/O NT_033899AP0011221263298803D11S412311470.001 AP001122, AP001535, Y17293
S/G/Y/R/B/O NT_033899AP0011221263657233D11S91211471.001 AP000712, AP001122
S/G/Y/R/B/O NT_033899AP0019951264684943      
S/G/Y/R/B/O NT_033899AP0033971266101883WI-846811469.001 AP003397
S/G/Y/R/B/O NT_033899AP0018291267229183D11S409111468.001 AP002828
S/G/Y/R/B/O NT_033899AP0009041268334843      
S/G/Y/R/B/O NT_033899AP0010001269853013      
S/G/Y/R/B/O NT_033899AP0030981272662053WI-521911467.001 AC009546, AP003098
S/G/Y/R/B/O NT_033899AP0035321273242131      
S/G/Y/R/B/O NT_033899AP0013181273628401      
S/G/Y/R/B/O NT_033899AC0262651274021201      


  NT_033899 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033899AP0008061275280983D11S415111466.001 AP000806
S/G/Y/R/B/O NT_033899AP0007411276108383      
S/G/Y/R/B/O NT_033899AP0017831277639733      
S/G/Y/R/B/O NT_033899AP0028321278452213      
S/G/Y/R/B/O NT_033899AP0028331279601183      
S/G/Y/R/B/O NT_033899AP0019731281326793      
S/G/Y/R/B/O NT_033899AP0019931281545113      
S/G/Y/R/B/O NT_033899AP0031211282989163      
S/G/Y/R/B/O NT_033899AP0034811283479183      
S/G/Y/R/B/O NT_033899AP0034621284600693      
S/G/Y/R/B/O NT_033899AP0035031286121693      
S/G/Y/R/B/O NT_033899AC0223331287571833      
S/G/Y/R/B/O NT_033899AC0216721288352141      
S/G/Y/R/B/O NT_033899AC0789711288805291      
S/G/Y/R/B/O NT_033899AC0096441289105971      
S/G/Y/R/B/O NT_033899AP0006801289257191      
S/G/Y/R/B/O NT_033899AC0800531289317731      
S/G/Y/R/B/O NT_033899AP0011431289378241      
S/G/Y/R/B/O NT_033899AP0019361289433001      
S/G/Y/R/B/O NT_033899AP0011831290009103WI-724411474.001 AP001183
S/G/Y/R/B/O NT_033899AC0192271291311983      
S/G/Y/R/B/O NT_033899AP0029861292105333      
S/G/Y/R/B/O NT_033899AP0034591293302853      
S/G/Y/R/B/O NT_033899AP0043711294997903CHLC.GATA69G0111472.001 AC079081, AP004371
S/G/Y/R/B/O NT_033899AP0034861295339473      
S/G/Y/R/B/O NT_033899AP0008241295851613      
S/G/Y/R/B/O NT_033899AP0010931297720813      
S/G/Y/R/B/O NT_033899AP0028061298601533      
S/G/Y/R/B/O NT_033899AP0028561300190233      
S/G/Y/R/B/O NT_033899AP0031661302069413      
S/G/Y/R/B/O NT_033899AP0030251304014643WI-650911480.001 AC017022, AC060794, AP003025
S/G/Y/R/B/O NT_033899AP0030391305256573CHLC.GATA72A0111481.001AC073904, AC027594, AC073904, AF240624, AP003039
S/G/Y/R/B/O NT_033899AP0043721307110043D11S91011482.001 AP002341
S/G/Y/R/B/O NT_033899AP0008441308692103WI-332211484.001 AB030580
S/G/Y/R/B/O NT_033899AP0008441309121673D11S132011483.001AP002355, AP002355
S/G/Y/R/B/O NT_033899AP0023551309131873      
S/G/Y/R/B/O NT_033899AP0047221309721503D11S419811485.001 AP004722
S/G/Y/R/B/O NT_033899AP0028311309816231      
S/G/Y/R/B/O NT_033899AC0739041309858901      
S/G/Y/R/B/O NT_033899 - WI-798311473.001Z93017, Z93017
S/G/Y/R/B/O NT_033899 - WI-972411476.001AC007540, AC007540