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  Chromosome 11 - YAC Map - Single Contig
 

Chromosome 11 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_033927
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033927AP001104728747613UTR-963111244.001AP001324, AC011719, AP001104, AP001324, AP002010
S/G/Y/R/B/O NT_033927AP001324730758163WI-618911245.001AP000560, AC011686, AC013405, AP000560, AP001324, AP002010
S/G/Y/R/B/O NT_033927AP000560730850203      
S/G/Y/R/B/O NT_033927AP001992732107023UTR-961711246.002AL137792, AC013405, AL137792, AL353354, AL358572, AP001992
S/G/Y/R/B/O NT_033927AP003175732548033      
S/G/Y/R/B/O NT_033927AP001972733329553      
S/G/Y/R/B/O NT_033927AP000744735454753      
S/G/Y/R/B/O NT_033927AP002815736690503      
S/G/Y/R/B/O NT_033927AP001922738419743      
S/G/Y/R/B/O NT_033927AP003031740252723      
S/G/Y/R/B/O NT_033927AP003168741184693      
S/G/Y/R/B/O NT_033927AP002340742321933      
S/G/Y/R/B/O NT_033927AP000785743960553      
S/G/Y/R/B/O NT_033927AP002360745198213      
S/G/Y/R/B/O NT_033927AP003165747523733AFMB291YH911247.001 AP000778, AP003165
S/G/Y/R/B/O NT_033927AP003165747852883WI-874711248.001 AP000778, AP003165
S/G/Y/R/B/O NT_033927AP001189749187813D11S417911249.001 AP001189
S/G/Y/R/B/O NT_033927AP001189749347623NK-S35611252.001AP003101, AC016390, AP001189, AP003101
S/G/Y/R/B/O NT_033927AP001189749381633CHLC.GATA51A1211250.001AP003101, AP001189, AP003101
S/G/Y/R/B/O NT_033927AP001189749522813WI-971511251.001AP003101, AP001189, AP003101
S/G/Y/R/B/O NT_033927AP003101749756943      
S/G/Y/R/B/O NT_033927AP003119750773633      
S/G/Y/R/B/O NT_033927AP002498751116893      
S/G/Y/R/B/O NT_033927AP000752752602153WI-668511254.001 AP000752
S/G/Y/R/B/O NT_033927AP001855754910553D11S418611253.001 AC087609, AP001855
S/G/Y/R/B/O NT_033927AP002827754960733      
S/G/Y/R/B/O NT_033927AP000486755558773      
S/G/Y/R/B/O NT_033927AP003680757058643      
S/G/Y/R/B/O NT_033927AP002789757526113      
S/G/Y/R/B/O NT_033927AP000609758548013D11S90611257.001 AP000609
S/G/Y/R/B/O NT_033927AP000609759081103WI-389511255.001 AP000609
S/G/Y/R/B/O NT_033927AP002343759711893D11S91111256.001 AP002343
S/G/Y/R/B/O NT_033927AP000580760400063      
S/G/Y/R/B/O NT_033927AP002812760615373      
S/G/Y/R/B/O NT_033927AP003032762282593      
S/G/Y/R/B/O NT_033927AP002520763769193D11S93711258.001 AC023532, AP001447, AP002520
S/G/Y/R/B/O NT_033927AP002985763817153      
S/G/Y/R/B/O NT_033927AP003086765844373      
S/G/Y/R/B/O NT_033927AP003110767268753      
S/G/Y/R/B/O NT_033927AP002768768869253WI-623811259.001 AP002412, AP002768
S/G/Y/R/B/O NT_033927AP002768769450803WI-408911261.001 AP000716, AP001141, AP002412, AP002768
S/G/Y/R/B/O NT_033927AP002768769700083D11S416611260.001 AP002768
S/G/Y/R/B/O NT_033927AP002515771470543AFMA140WA911263.001 AP002515
S/G/Y/R/B/O NT_033927AP002958772488903D11S91811265.001 AC011980, AC079194, AP002470, AP002958
S/G/Y/R/B/O NT_033927AP002958772586683CHLC.GAAT2C0511264.001 AC011980, AC079194, AP002958
S/G/Y/R/B/O NT_033927AP002957773468543D11S135211262.001AP001547, AP001547, AP002957
S/G/Y/R/B/O NT_033927AP001547773472143      
S/G/Y/R/B/O NT_033927AP000610774896503      
S/G/Y/R/B/O NT_033927AP001838777144343D11S176111266.001 AP001838
S/G/Y/R/B/O NT_033927AP003024777223543      


  NT_033927 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033927AP001978778840053D11S414311267.001AP000478, AC036130, AP000478, AP001978
S/G/Y/R/B/O NT_033927AP000478779182543      
S/G/Y/R/B/O NT_033927AP002350779826473      
S/G/Y/R/B/O NT_033927AP001541780814933      
S/G/Y/R/B/O NT_033927AP001284783227863D11S136211268.001 AP000614
S/G/Y/R/B/O NT_033927AP000764784879423CHLC.GATA30G0111269.001AC022316, AC022316, AC074187, AP000764
S/G/Y/R/B/O NT_033927AC022316785313133      
S/G/Y/R/B/O NT_033927AP002984786627053      
S/G/Y/R/B/O NT_033927AC018897787581463      
S/G/Y/R/B/O NT_033927AP003036788271733      
S/G/Y/R/B/O NT_033927AP002759789864193CHLC.GATA47E1011270.001 AC021243, AC053515, AC073372, AP002759
S/G/Y/R/B/O NT_033927AP003679790566503      
S/G/Y/R/B/O NT_033927AP003398791143893      
S/G/Y/R/B/O NT_033927AP002960792690773      
S/G/Y/R/B/O NT_033927AP003464793457903      
S/G/Y/R/B/O NT_033927AP002801794920753      
S/G/Y/R/B/O NT_033927AP003107797091933      
S/G/Y/R/B/O NT_033927AP002783797519603AFM331VC911271.001 AP002783
S/G/Y/R/B/O NT_033927AP003081799089763      
S/G/Y/R/B/O NT_033927AP002988799356983      
S/G/Y/R/B/O NT_033927AP002802800967063CHLC.GGAA2C1011272.001 AP002802
S/G/Y/R/B/O NT_033927AP002802801692243WI-254511273.001AP001976, AP001976, AP002802
S/G/Y/R/B/O NT_033927AP001976802423723      
S/G/Y/R/B/O NT_033927AP000623803669533D11S90111274.001AP001179, AP001179
S/G/Y/R/B/O NT_033927AP001179803716943      
S/G/Y/R/B/O NT_033927AP003060805539873      
S/G/Y/R/B/O NT_033927AP003773807164953      
S/G/Y/R/B/O NT_033927AP000793807599783      
S/G/Y/R/B/O NT_033927AP002796809231023      
S/G/Y/R/B/O NT_033927AP001646810101793      
S/G/Y/R/B/O NT_033927AP000893812403143WI-302411276.001 AC022399, AC080106, AP000893
S/G/Y/R/B/O NT_033927AP001767812853363      
S/G/Y/R/B/O NT_033927AP000873814258973      
S/G/Y/R/B/O NT_033927AP002500815382553      
S/G/Y/R/B/O NT_033927AP000446816886193WI-962611277.001AP003026, AP000446, AP003026
S/G/Y/R/B/O NT_033927AP003026816906013      
S/G/Y/R/B/O NT_033927AP000773817924783      
S/G/Y/R/B/O NT_033927AP002370819543583      
S/G/Y/R/B/O NT_033927AP002751820833463D11S418711278.001 AC067758, AP002751
S/G/Y/R/B/O NT_033927AC023118821555483      
S/G/Y/R/B/O NT_033927AP002797822793763      
S/G/Y/R/B/O NT_033927AP003305825210133AFM337TC511279.001 AC019139, AC062011, AP003305
S/G/Y/R/B/O NT_033927AP001984825731153      
S/G/Y/R/B/O NT_033927AP001791826330703      
S/G/Y/R/B/O NT_033927AP000852827833633D11S413511280.001 AC011023, AP000852
S/G/Y/R/B/O NT_033927AP001825830523983D11S414711281.001 AP001825
S/G/Y/R/B/O NT_033927AP000857831394983AFM336YH511282.001 AP000857
S/G/Y/R/B/O NT_033927AP000857831948993D11S135411285.001 AC019020, AP000857
S/G/Y/R/B/O NT_033927AP000639832714103      
S/G/Y/R/B/O NT_033927AP003093833604163      


  NT_033927 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033927AP003095834335103      
S/G/Y/R/B/O NT_033927AP002803834629543      
S/G/Y/R/B/O NT_033927AP003035835901063CHLC.GATA63C0811283.001 AC023410, AC037434, AP003035
S/G/Y/R/B/O NT_033927AP002878837531663      
S/G/Y/R/B/O NT_033927AP000642838574783      
S/G/Y/R/B/O NT_033927AP000974840187363      
S/G/Y/R/B/O NT_033927AP003128841104853      
S/G/Y/R/B/O NT_033927AP000767841910873WI-622211286.001 AC055755, AP000767, AP001139
S/G/Y/R/B/O NT_033927AP003097844428283D11S419711287.001 AC013370, AC025974, AP003097
S/G/Y/R/B/O NT_033927AP003084844604603      
S/G/Y/R/B/O NT_033927AP001148845270623      
S/G/Y/R/B/O NT_033927AP002492846939033      
S/G/Y/R/B/O NT_033927AP001831849133943D11S188711288.001 AP000632, AP001831, AP002506
S/G/Y/R/B/O NT_033927AP003059849284993      
S/G/Y/R/B/O NT_033927AP000654850154763      
S/G/Y/R/B/O NT_033927AP001528851211013      
S/G/Y/R/B/O NT_033927AP002967852704263      
S/G/Y/R/B/O NT_033927AP001102854551163      
S/G/Y/R/B/O NT_033927AP000811856339933WI-284211289.002AP000834, AP000811, AP000834
S/G/Y/R/B/O NT_033927AP003497857484473WI-189011290.001 AC072050, AC093201, AP003497
S/G/Y/R/B/O NT_033927 - D11S136511275.000  
S/G/Y/R/B/O NT_033927 - AFM207YA511284.001AC093221, AC093221