Chromosome 1 - YAC Map - Single Contig

Chromosome 1 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_028053

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_028053	AL670471	25665913	3
S/G/Y/R/B/O	NT_028053	AL353622	25801470	3	WI-6546	1	44.00	1	AC025860, AC027421,	AC025860, AC027421, AL353622
S/G/Y/R/B/O	NT_028053	AC025860	25878566	1
S/G/Y/R/B/O	NT_028053	AC027421	25881043	1	WI-9675	3	542.00	1	AC025860,	AC025860, AC027421, AL353354
S/G/Y/R/B/O	NT_028053	AL137792	25924450	3	WI-7771	1	43.00	1	AC025860, AC027421,	AC025860, AC027421, AL137792, AL353354
S/G/Y/R/B/O	NT_028053	AL137792	25978701	3	UTR-9617	11	246.00	2	AP001992,	AC013405, AL137792, AL353354, AL358572, AP001992
S/G/Y/R/B/O	NT_028053	AL512288	26041718	3
S/G/Y/R/B/O	NT_028053	AC026088	26152835	1
S/G/Y/R/B/O	NT_028053	AL109927	26221429	1	WI-7402	1	40.00	1	AC026088,	AC026088, AF064757, AL109927
S/G/Y/R/B/O	NT_028053	AL020997	26249480	3	WI-6811	1	39.00	1	AC026088, AL109927,	AC026088, AL020997, AL109927
S/G/Y/R/B/O	NT_028053	AL020997	26272321	3	D1S2787	1	41.00	1	AC026088,	AC026088, AL020997
S/G/Y/R/B/O	NT_028053	AL445490	26363192	3
S/G/Y/R/B/O	NT_028053	AL031729	26461766	3	D1S2639	1	42.00	1		AL357335
S/G/Y/R/B/O	NT_028053	AL161641	26583743	1	WI-3128	1	791.00	2	AC021209, AL138782,	AC021209, AL138782, AL161641, AL353354
S/G/Y/R/B/O	NT_028053	AL663122	26584795	3
S/G/Y/R/B/O	NT_028053	AL096774	26594491	3
S/G/Y/R/B/O	NT_028053	AL663123	26669813	3
S/G/Y/R/B/O	NT_028053	AL590640	26793309	3	FB11D1	1	747.00	1		AL590640
S/G/Y/R/B/O	NT_028053	AL590640	26805577	3	WI-1875	1	748.00	1		AL590640
S/G/Y/R/B/O	NT_028053	AL137860	26894507	2
S/G/Y/R/B/O	NT_028053	AL356390	27076091	1	D1S2749	1	36.00	1		AL356390
S/G/Y/R/B/O	NT_028053	AC004873	27100406	3
S/G/Y/R/B/O	NT_028053	AL034380	27247465	3	WI-6306	1	38.00	1		AL034380
S/G/Y/R/B/O	NT_028053	AL512408	27306970	1
S/G/Y/R/B/O	NT_028053	AL627082	27369144	3
S/G/Y/R/B/O	NT_028053	AL109743	27385823	3
S/G/Y/R/B/O	NT_028053	AL627313	27405067	2
S/G/Y/R/B/O	NT_028053		-		D1S511	1	45.00	0