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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_019273
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019273AC0192251109964481      
S/G/Y/R/B/O NT_019273AL3558171109977883      
S/G/Y/R/B/O NT_019273AL3601711110139411      
S/G/Y/R/B/O NT_019273AL1600061110933783      
S/G/Y/R/B/O NT_019273AL3559901111851613      
S/G/Y/R/B/O NT_019273AL1377901112304993      
S/G/Y/R/B/O NT_019273AC0259871113758401D1S4571396.001AC068519, AC025987, AC068519
S/G/Y/R/B/O NT_019273AC0685191113922001      
S/G/Y/R/B/O NT_019273AC0111841114015361      
S/G/Y/R/B/O NT_019273AL1219821115771493D1S1891427.001 AL121982, AL158842
S/G/Y/R/B/O NT_019273AL3653181116592013WI-101301426.001 AL158842, AL365318
S/G/Y/R/B/O NT_019273AL3571371117302073      
S/G/Y/R/B/O NT_019273AL4492641118304743      
S/G/Y/R/B/O NT_019273AL4503891120689772D1S26871424.001 AL450389
S/G/Y/R/B/O NT_019273AL5924361120900263      
S/G/Y/R/B/O NT_019273AP0013931121868081      
S/G/Y/R/B/O NT_019273AL1579501122018743CHLC.GATA66C021423.001 AL157950
S/G/Y/R/B/O NT_019273AL5126381122736462D1S4671425.001AP001393, AP001393
S/G/Y/R/B/O NT_019273AL6064991124102933      
S/G/Y/R/B/O NT_019273AL0498251124919433AFM269XA91422.001 AL049825
S/G/Y/R/B/O NT_019273AL0498251125095603WI-98491421.001 AL049825, AL390120
S/G/Y/R/B/O NT_019273AL1394281125455763      
S/G/Y/R/B/O NT_019273AL1096601125872553      
S/G/Y/R/B/O NT_019273AL6455021127248183      
S/G/Y/R/B/O NT_019273AL3583721127485633      
S/G/Y/R/B/O NT_019273AL3902351129167713D1S28521420.001 AL390235
S/G/Y/R/B/O NT_019273AL0967731130203983WI-76141418.001 AL096773
S/G/Y/R/B/O NT_019273AL0967731130504933CHLC.GGAA25C101417.001 AL096773
S/G/Y/R/B/O NT_019273AL0967731130597973D1S2501419.001 AL096773
S/G/Y/R/B/O NT_019273AL1333821130635923      
S/G/Y/R/B/O NT_019273AL3902411131449113      
S/G/Y/R/B/O NT_019273AL0354101132683123      
S/G/Y/R/B/O NT_019273AL5122911134107643      
S/G/Y/R/B/O NT_019273AL1219991135308263CHLC.GGAA20F081416.001 AC023551, AL121999
S/G/Y/R/B/O NT_019273AL1625941136222613FB14F91415.001 AC023551, AL162594
S/G/Y/R/B/O NT_019273AL5917421136617593      
S/G/Y/R/B/O NT_019273AC0270741137478081      
S/G/Y/R/B/O NT_019273AL3907971137612593      
S/G/Y/R/B/O NT_019273AL3582151138235303      
S/G/Y/R/B/O NT_019273AL3653611139810263WI-9755687.001 AL365361
S/G/Y/R/B/O NT_019273AL3653611140095683D1S27261398.001 AL365361, AL513469
S/G/Y/R/B/O NT_019273AL3653611140406083UTR-98691397.001AC011184, AC011184, AL365361, AL513469, M38217
S/G/Y/R/B/O NT_019273AL1363741140764023      
S/G/Y/R/B/O NT_019273AL3547131142395543D1S28091400.001 AJ243474
S/G/Y/R/B/O NT_019273AL3547131142395573WI-42831399.001 AC025375
S/G/Y/R/B/O NT_019273AL3910641142505263      
S/G/Y/R/B/O NT_019273AL3602701143297033AFMB017ZG11401.001 AC068027
S/G/Y/R/B/O NT_019273AL3558161144526382      
S/G/Y/R/B/O NT_019273AL5132021145894843      
S/G/Y/R/B/O NT_019273AL3563871146812243      


  NT_019273 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019273AL3901951148081303WI-85051405.001 AL390195
S/G/Y/R/B/O NT_019273AL3901951148087863WI-67691404.001 AL390195
S/G/Y/R/B/O NT_019273AL3901951148250973D1S27891403.001 AL390195
S/G/Y/R/B/O NT_019273AL3901951148288283WI-934018271.001 AL390195
S/G/Y/R/B/O NT_019273AL3901951148672653WI-72921402.001 AL357633, AL390195
S/G/Y/R/B/O NT_019273AL3910631149199003      
S/G/Y/R/B/O NT_019273AL1390121149768433      
S/G/Y/R/B/O NT_019273AL0495571150183943      
S/G/Y/R/B/O NT_019273AL4509971151447713      
S/G/Y/R/B/O NT_019273AL3900701152713633      
S/G/Y/R/B/O NT_019273AL5126651153352532      
S/G/Y/R/B/O NT_019273AL3571141155048523      
S/G/Y/R/B/O NT_019273AL4454261155087033      
S/G/Y/R/B/O NT_019273AL5915211156795473AFMA323XC11411.001 AL591521, AL645737
S/G/Y/R/B/O NT_019273AL4504071157609313      
S/G/Y/R/B/O NT_019273AL3547601157937463D1S4181413.001 AL354760, AL390062, AL645737
S/G/Y/R/B/O NT_019273AL3547601158507943D1S27461412.001 AL354760
S/G/Y/R/B/O NT_019273AL1099321158870133      
S/G/Y/R/B/O NT_019273AC0244811159853871D1S4871414.001 AC024481
S/G/Y/R/B/O NT_019273AC0157301159985991      
S/G/Y/R/B/O NT_019273AL6038321160840691D1S27561408.001 AL603832
S/G/Y/R/B/O NT_019273AL6038321161295491AFMA247XF91407.001 AL603832
S/G/Y/R/B/O NT_019273AL6720771161453371      
S/G/Y/R/B/O NT_019273AL3907291162097173      
S/G/Y/R/B/O NT_019273AL1588441162823103NIB16091409.002AL672077, AC110993, AJ438945, AL158844, AL390315, AL672077
S/G/Y/R/B/O NT_019273AL1588441162827783WI-79731410.002AL672077, AC110993, AJ438945, AL158844, AL390315, AL672077
S/G/Y/R/B/O NT_019273AL3902421163307753      
S/G/Y/R/B/O NT_019273AL3570551163995582      
S/G/Y/R/B/O NT_019273AL1390161165819173      
S/G/Y/R/B/O NT_019273AL3652251166269683      
S/G/Y/R/B/O NT_019273AL3910581167793933      
S/G/Y/R/B/O NT_019273AL3899211168598763      
S/G/Y/R/B/O NT_019273AL3907591169266403      
S/G/Y/R/B/O NT_019273AL1335171169980043      
S/G/Y/R/B/O NT_019273AL3653211171235573      
S/G/Y/R/B/O NT_019273AL1378561171624483