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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_021877
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021877AC1044651979126221      
S/G/Y/R/B/O NT_021877AL1624061980164841      
S/G/Y/R/B/O NT_021877AC0928101980396893      
S/G/Y/R/B/O NT_021877AL5897411981645863WI-94151758.002AC092810, AL442125, AC027737, AC092810, AL391066, AL442125, AL589741
S/G/Y/R/B/O NT_021877AL0354081983636033D1S2451757.001 AL035408
S/G/Y/R/B/O NT_021877AL0237541984742463D1S4711754.001 AL023754
S/G/Y/R/B/O NT_021877AL0237541985001883D1S4911755.001 AL023754
S/G/Y/R/B/O NT_021877AL0313161986286143CHLC.GATA74A061756.001 AL031316
S/G/Y/R/B/O NT_021877AL0223981986515473      
S/G/Y/R/B/O NT_021877AL0227281987873753      
S/G/Y/R/B/O NT_021877AL0350461988137993      
S/G/Y/R/B/O NT_021877AL0223991988680143D1S2051760.001 AL022399
S/G/Y/R/B/O NT_021877AL0223971989180373      
S/G/Y/R/B/O NT_021877AL5132631990272403      
S/G/Y/R/B/O NT_021877AL0354141991754323WI-43961761.001 AL035414, AL356960, AL360077
S/G/Y/R/B/O NT_021877AL0343511992800303      
S/G/Y/R/B/O NT_021877AL5906531994176083      
S/G/Y/R/B/O NT_021877AL1617361996300643D1S26361740.001 AL161736
S/G/Y/R/B/O NT_021877AL3546811996727233AFM165XH101739.001 AL354681
S/G/Y/R/B/O NT_021877AL5918461999023513NIB17111741.001 AL445652, AL591846
S/G/Y/R/B/O NT_021877AL5133151999357883      
S/G/Y/R/B/O NT_021877AC0989352000182353      
S/G/Y/R/B/O NT_021877AL5896722002088003      
S/G/Y/R/B/O NT_021877AL4454932002952733NIB17511744.001 AL445493
S/G/Y/R/B/O NT_021877AL5962182003677333      
S/G/Y/R/B/O NT_021877AL3915972005662543AFMB336WA91745.001AC031978, AL691452, AC031978, AL391597, AL691452
S/G/Y/R/B/O NT_021877AC0319782006357921      
S/G/Y/R/B/O NT_021877AL6914522006407571      
S/G/Y/R/B/O NT_021877AL1377892007158023D1S27961746.001 AL137789, AL160003
S/G/Y/R/B/O NT_021877AL1377892007531133D1S27821742.001 AL137789
S/G/Y/R/B/O NT_021877AL3651782008448861      
S/G/Y/R/B/O NT_021877AC0843932008772453      
S/G/Y/R/B/O NT_021877AL0352092009461623D1S26851749.001AC084393, AL365178, AC084393, AL035209, AL365178
S/G/Y/R/B/O NT_021877AL0350912011237403WI-96221750.002AL356275, AL356275, AL035091, AL158017, AL356275, AL356275
S/G/Y/R/B/O NT_021877AL4452542011876983      
S/G/Y/R/B/O NT_021877AC0934212013349193CHLC.GATA50F121753.001 AC093421, AL391220
S/G/Y/R/B/O NT_021877AC0997932013780133      
S/G/Y/R/B/O NT_021877AL4511842015458543      
S/G/Y/R/B/O NT_021877AC0966742015815093      
S/G/Y/R/B/O NT_021877AL6629182018335881WI-41471751.001 AL662918
S/G/Y/R/B/O NT_021877AL6067532018514173D1S28911752.001AC016454, AL662918, AC016454, AL606753, AL662918
S/G/Y/R/B/O NT_021877AL5901382019093483      
S/G/Y/R/B/O NT_021877AL3562752021083731WI-96221750.002AL035091, AL035091, AL158017, AL356275, AL356275
S/G/Y/R/B/O NT_021877AC0164542022854081      
S/G/Y/R/B/O NT_021877AL6914412023012551      
S/G/Y/R/B/O NT_021877AC0966362023575551      
S/G/Y/R/B/O NT_021877AC0997552025666431D1S4141762.001 AC099755
S/G/Y/R/B/O NT_021877AL5901322025932242      
S/G/Y/R/B/O NT_021877AL6037912027433143      
S/G/Y/R/B/O NT_021877AC0920172027590303      


  NT_021877 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021877AL6119642030390721WI-29161764.001AL590101, AL590101, AL611964
S/G/Y/R/B/O NT_021877AL5901012030522553      
S/G/Y/R/B/O NT_021877AC0161922031579621      
S/G/Y/R/B/O NT_021877AC1052752031667671      
S/G/Y/R/B/O NT_021877AL3563102033205981      
S/G/Y/R/B/O NT_021877AC0160472033301031      
S/G/Y/R/B/O NT_021877AC0966372034295371      
S/G/Y/R/B/O NT_021877AL4454882035900801      
S/G/Y/R/B/O NT_021877AC0928142036047503D1S27801766.001AL445488, AC092814, AL445488
S/G/Y/R/B/O NT_021877AC0928142036206043D1S4251767.001AL445488, AL445488
S/G/Y/R/B/O NT_021877AL5922972037698513      
S/G/Y/R/B/O NT_021877 - STSG-99711743.000AL445493, AL445493
S/G/Y/R/B/O NT_021877 - FB11D11747.001AL590640, AL590640
S/G/Y/R/B/O NT_021877 - WI-18751748.001AL590640, AL590640
S/G/Y/R/B/O NT_021877 - WI-93901759.001AC027069, AL356292, AC027069, AL356292
S/G/Y/R/B/O NT_021877 - WI-56901763.001AC092692, AC024709, AC079211, AC092692