Chromosome 1 - YAC Map - Single Contig

Chromosome 1 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_021907

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_021907	AC053497	143324782	1
S/G/Y/R/B/O	NT_021907	AL356356	143363097	3
S/G/Y/R/B/O	NT_021907	AL356292	143537647	2
S/G/Y/R/B/O	NT_021907	AC027069	143686592	1	WI-9390	1	759.00	1	AL356292,	AC027069, AL356292
S/G/Y/R/B/O	NT_021907	AL355860	143689717	3
S/G/Y/R/B/O	NT_021907	AL590133	143835377	2	WI-6771	1	475.00	1		AL451053, AL590133
S/G/Y/R/B/O	NT_021907	AL590133	143854724	2	WI-7370	1	474.00	1	AL691467,	AL451053, AL590133, AL691467
S/G/Y/R/B/O	NT_021907	AL590133	143925761	2	WI-9627	1	476.00	1	AL691467,	AL590133, AL691467
S/G/Y/R/B/O	NT_021907	AL691467	143996263	1
S/G/Y/R/B/O	NT_021907	AL592424	144001561	2
S/G/Y/R/B/O	NT_021907	AL391069	144219377	3	D1S498	1	477.00	1		AL158846, AL391069
S/G/Y/R/B/O	NT_021907	AL391069	144239662	3	D1S2347	1	478.00	1		AL158846, AL391069
S/G/Y/R/B/O	NT_021907	AL589764	144274761	3
S/G/Y/R/B/O	NT_021907	AL365436	144476616	1	D1S2343	1	479.00	1		AL365436
S/G/Y/R/B/O	NT_021907	AL391335	144464830	1	WI-6705	9	71.00	2	AF199339, AL359998, AL441925,	AF199339, AL359998, AL391335, AL441925
S/G/Y/R/B/O	NT_021907	AC068971	144454440	1
S/G/Y/R/B/O	NT_021907	AL589765	144592036	3
S/G/Y/R/B/O	NT_021907	AL450992	144897330	3	UTR-9853	1	483.00	1		AL450992
S/G/Y/R/B/O	NT_021907	AL591893	144938875	3
S/G/Y/R/B/O	NT_021907	AL589986	145020749	2	WI-7815	1	482.00	1		AL450993, AL589986
S/G/Y/R/B/O	NT_021907	AL627110	145159732	3
S/G/Y/R/B/O	NT_021907	AL356504	145216574	3	WI-7217	1	480.00	1		AL356504, M60503
S/G/Y/R/B/O	NT_021907	AL135842	145322082	3	WI-5177	1	481.00	1		AL135842
S/G/Y/R/B/O	NT_021907	AL356426	145466570	3
S/G/Y/R/B/O	NT_021907	AL139247	145516925	3
S/G/Y/R/B/O	NT_021907	AL353779	145632009	3
S/G/Y/R/B/O	NT_021907		-		WI-7732	1	470.00	1	AC018785, AL591493,	AC018785, AL591493, X57985
S/G/Y/R/B/O	NT_021907		-		WI-8123	1	471.00	1	AC018785, AL590487,	AC018785, AL590487
S/G/Y/R/B/O	NT_021907		-		NIB1471	1	472.00	1	AL358073,	AC022243, AL358073
S/G/Y/R/B/O	NT_021907		-		WI-8118	1	473.00	1	AL163171,	AC069588, AL163171
S/G/Y/R/B/O	NT_021907		-		CHLC.GATA51H09	1	484.00	0