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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004464
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004464AL691520691701801CHLC.ATA28C071211.001AC031997, AC031997, AL645475, AL691520
S/G/Y/R/B/O NT_004464AC031997692257161      
S/G/Y/R/B/O NT_004464AL356106692853503      
S/G/Y/R/B/O NT_004464AL358854693378293      
S/G/Y/R/B/O NT_004464AL512271694209373      
S/G/Y/R/B/O NT_004464AL157406695716283D1S2191212.001 AC021495
S/G/Y/R/B/O NT_004464AL359894696729303      
S/G/Y/R/B/O NT_004464AL117353698390393CHLC.GATA42F051213.001 AL117353, AL139153
S/G/Y/R/B/O NT_004464AL117353698762083GCT17A041214.001 AL117353, AL139153
S/G/Y/R/B/O NT_004464AL359412699472853      
S/G/Y/R/B/O NT_004464AL391728700096702      
S/G/Y/R/B/O NT_004464AL158840701594653      
S/G/Y/R/B/O NT_004464AL157948702687493GCT17E121216.001 AL157948
S/G/Y/R/B/O NT_004464AL353771703954973D1S27981218.001 AC019213
S/G/Y/R/B/O NT_004464AL353771704471613UTR-98451215.001 AC019213, AL353771
S/G/Y/R/B/O NT_004464AL354721704696123      
S/G/Y/R/B/O NT_004464AL158839705246823      
S/G/Y/R/B/O NT_004464AL354872706351663D1S5011217.001 AC026545
S/G/Y/R/B/O NT_004464AL592104707405703      
S/G/Y/R/B/O NT_004464AL513285708720593      
S/G/Y/R/B/O NT_004464AL662898709680373      
S/G/Y/R/B/O NT_004464AL158087710487433WI-78941220.001 AL139422, AL158087
S/G/Y/R/B/O NT_004464AL031429711487873WI-93761222.001 AL031429, AL139422
S/G/Y/R/B/O NT_004464AL031429711671413WI-92931219.001 AL031429, AL139422
S/G/Y/R/B/O NT_004464AL031429711693933CHLC.GATA85C011221.001 AL031429
S/G/Y/R/B/O NT_004464AL031429712168613D1S1921223.001 AL031429
S/G/Y/R/B/O NT_004464AL512443712532403      
S/G/Y/R/B/O NT_004464AL360297713586363D1S28951224.001 AL360297
S/G/Y/R/B/O NT_004464AL358453714747343      
S/G/Y/R/B/O NT_004464AL627317716704403AFMB280XC11226.001 AL627317
S/G/Y/R/B/O NT_004464AL354949716733023      
S/G/Y/R/B/O NT_004464AL355590718708541D1S2241225.001 AL355590
S/G/Y/R/B/O NT_004464AL359821718856453      
S/G/Y/R/B/O NT_004464AL356600721224603WI-53561227.002AC009692, AC009692, AC009694, AL356600
S/G/Y/R/B/O NT_004464AL391239721330533      
S/G/Y/R/B/O NT_004464AL645767722054213      
S/G/Y/R/B/O NT_004464AL513349722371393      
S/G/Y/R/B/O NT_004464AL365362723847273      
S/G/Y/R/B/O NT_004464AL645724724750673      
S/G/Y/R/B/O NT_004464AL512292724840883      
S/G/Y/R/B/O NT_004464AL365254726174853      
S/G/Y/R/B/O NT_004464AL513166729339173D1S4941228.001 AL513166
S/G/Y/R/B/O NT_004464AL139149729420113      
S/G/Y/R/B/O NT_004464AL583808729619693