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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_021979
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021979AC104456936023881D1S4241314.001 AC104456
S/G/Y/R/B/O NT_021979AC104332929780773      
S/G/Y/R/B/O NT_021979AL133332931171213D1S27761315.001AC104332, AC004662, AC104332, AL133332
S/G/Y/R/B/O NT_021979AL133332931654173WI-52131317.001 AC004662, AL133332
S/G/Y/R/B/O NT_021979AL162740932062613WI-14231318.001 AL162740
S/G/Y/R/B/O NT_021979AL162740932425733D1S28681319.001 AL162740
S/G/Y/R/B/O NT_021979AL449283932780043      
S/G/Y/R/B/O NT_021979AC093577934266993D1S28491316.001 AC022425
S/G/Y/R/B/O NT_021979AL117354934370063      
S/G/Y/R/B/O NT_021979AL355822935393761      
S/G/Y/R/B/O NT_021979AC095037936196741      
S/G/Y/R/B/O NT_021979AL451010936808311      
S/G/Y/R/B/O NT_021979AL663109938131873      
S/G/Y/R/B/O NT_021979AC023066938284611      
S/G/Y/R/B/O NT_021979AC104836938544431      
S/G/Y/R/B/O NT_021979AL139421940041193      
S/G/Y/R/B/O NT_021979AL137159941562183WI-91221320.001AC095034, AC009719, AC095034, AL137159
S/G/Y/R/B/O NT_021979AC095034941950673      
S/G/Y/R/B/O NT_021979AL512651942270803      
S/G/Y/R/B/O NT_021979AL109613943277443      
S/G/Y/R/B/O NT_021979AC055786944677611      
S/G/Y/R/B/O NT_021979AL359820944732421      
S/G/Y/R/B/O NT_021979AL512488945248633      
S/G/Y/R/B/O NT_021979AL049796946671653D1S32471323.001 AL049796
S/G/Y/R/B/O NT_021979AL117351947418813WI-30991321.001 AL117351
S/G/Y/R/B/O NT_021979AC105278947620431      
S/G/Y/R/B/O NT_021979AC093579947829223      
S/G/Y/R/B/O NT_021979AL162735949393443      
S/G/Y/R/B/O NT_021979AC097059951233563D1S2361324.001 AC097059
S/G/Y/R/B/O NT_021979AL356604951796051      
S/G/Y/R/B/O NT_021979AL138758952759733      
S/G/Y/R/B/O NT_021979AC093117953841783      
S/G/Y/R/B/O NT_021979AL391555954975423      
S/G/Y/R/B/O NT_021979AC093429955621053D1S27751325.001 AC025122, AC093429
S/G/Y/R/B/O NT_021979AC093429955803533D1S28131326.001 AC093429
S/G/Y/R/B/O NT_021979AL359554957059023      
S/G/Y/R/B/O NT_021979AC105942957282941      
S/G/Y/R/B/O NT_021979AC113934958407631      
S/G/Y/R/B/O NT_021979AC095033958480031      
S/G/Y/R/B/O NT_021979AC099787959207201      
S/G/Y/R/B/O NT_021979AC060770960571881      
S/G/Y/R/B/O NT_021979AC091608961481113WI-79671336.001AC060770, AC024432, AC060770, AC091608
S/G/Y/R/B/O NT_021979AL592205962405793      
S/G/Y/R/B/O NT_021979AL357952963664033      
S/G/Y/R/B/O NT_021979AL357150964097593      
S/G/Y/R/B/O NT_021979AL139347966318863WI-19741334.001 AL139347
S/G/Y/R/B/O NT_021979AL390919966690473      
S/G/Y/R/B/O NT_021979AL136325966713053      
S/G/Y/R/B/O NT_021979AC092393967541773      
S/G/Y/R/B/O NT_021979AC022661968447021      


  NT_021979 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_021979AL139018968559121WI-99441333.002AL138780, AL138780, AL139018
S/G/Y/R/B/O NT_021979AL139018968742101D1S27191332.002AC022661, AC023879, AC022661, AC023879
S/G/Y/R/B/O NT_021979AC023879968978691      
S/G/Y/R/B/O NT_021979AC092802970086773WI-4861328.001 AC092802, AL356152
S/G/Y/R/B/O NT_021979AL139014970979643      
S/G/Y/R/B/O NT_021979AL445218971489983      
S/G/Y/R/B/O NT_021979AL109756972898803D1S26641329.001 AL109756
S/G/Y/R/B/O NT_021979AL356479973044923      
S/G/Y/R/B/O NT_021979AC096538974325341      
S/G/Y/R/B/O NT_021979AL604048975121673      
S/G/Y/R/B/O NT_021979AL138780976065633WI-99441333.002AL139018, AL138780, AL139018
S/G/Y/R/B/O NT_021979AL138780976248603D1S27191332.002AC022661, AC023879, AC022661, AC023879
S/G/Y/R/B/O NT_021979AL604047976876023WI-53911331.001 AL604047
S/G/Y/R/B/O NT_021979AL390121977113223      
S/G/Y/R/B/O NT_021979AC099566978617111      
S/G/Y/R/B/O NT_021979AC021191978909251      
S/G/Y/R/B/O NT_021979AC092812978957773      
S/G/Y/R/B/O NT_021979AL683887980566801      
S/G/Y/R/B/O NT_021979 - AFMB337XE11312.001AC098691, AL355871, AC098691, AL355871
S/G/Y/R/B/O NT_021979 - WI-72821313.001AC099334, AC099334
S/G/Y/R/B/O NT_021979 - WI-60201322.000  
S/G/Y/R/B/O NT_021979 - D1S34771327.003AL031847, AL031847, AL589792
S/G/Y/R/B/O NT_021979 - WI-51661330.000  
S/G/Y/R/B/O NT_021979 - WI-75591335.000 More than 15