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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004982
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004982AC0254031535607421      
S/G/Y/R/B/O NT_004982AL0319651535763843      
S/G/Y/R/B/O NT_004982AL0312851536965453D1S2101583.001 AL031285
S/G/Y/R/B/O NT_004982Z972001538085493      
S/G/Y/R/B/O NT_004982AL0234951539669983      
S/G/Y/R/B/O NT_004982AL1623991540336973D1S4521582.001 AL162399
S/G/Y/R/B/O NT_004982AL3547321540846221      
S/G/Y/R/B/O NT_004982AL3546991542000431      
S/G/Y/R/B/O NT_004982AL4452031543398613      
S/G/Y/R/B/O NT_004982AL1624281545123043      
S/G/Y/R/B/O NT_004982AL3564751545142983      
S/G/Y/R/B/O NT_004982AL1217141547074013WI-63021581.001 AL121714
S/G/Y/R/B/O NT_004982AL4451911547091223      
S/G/Y/R/B/O NT_004982AL0312971547128993      
S/G/Y/R/B/O NT_004982AL0219401549044313WI-91251580.001 AL021940, M61894
S/G/Y/R/B/O NT_004982AL0219401549371603WI-70451579.001 AL021940
S/G/Y/R/B/O NT_004982AL0221461549574693      
S/G/Y/R/B/O NT_004982Z995721550353943      
S/G/Y/R/B/O NT_004982AL0210681551418613      
S/G/Y/R/B/O NT_004982AC0680461552434351      
S/G/Y/R/B/O NT_004982AL3568521552465391      
S/G/Y/R/B/O NT_004982Z997581553002093      
S/G/Y/R/B/O NT_004982AL1388991555061013WI-75421506.001AC025403, AB045357, AC025403, AL138899, AP002532, X14974
S/G/Y/R/B/O NT_004982AL1219861556154083WI-91081507.001AC025403, AB045357, AC025403, AL121986, AP002532
S/G/Y/R/B/O NT_004982AL3654401557442713      
S/G/Y/R/B/O NT_004982AL1602831558711253      
S/G/Y/R/B/O NT_004982AL3538941559327623UTR-98271509.001 AB045360, AL353894, AP002533
S/G/Y/R/B/O NT_004982AL5132051561711653WI-71931510.001 AB045361, AL513205, AP002534
S/G/Y/R/B/O NT_004982AL5132081561972423      
S/G/Y/R/B/O NT_004982AL3597531563258911WI-66741512.001 AL359753
S/G/Y/R/B/O NT_004982AL3597531563720831WI-8231511.002AC011767, AC011767, AL359753, AP002534
S/G/Y/R/B/O NT_004982AL4511341564291323AFMA323ZE51514.001 AB045364, AL451134, AP002535
S/G/Y/R/B/O NT_004982AL0354031564652983AFMB364YF51513.001 AL035403
S/G/Y/R/B/O NT_004982AL0354031565223673D1S26351515.001 AL035403
S/G/Y/R/B/O NT_004982AL5133231565700993      
S/G/Y/R/B/O NT_004982AL6630231567364382      
S/G/Y/R/B/O NT_004982AL6067521568185463      
S/G/Y/R/B/O NT_004982AL4455281569104463WI-89451517.001 AC016787, AL359843, AL445528
S/G/Y/R/B/O NT_004982AL4455281570342193WI-82061518.001 AF442818, AF449713, AL359843, AL445528, M11725
S/G/Y/R/B/O NT_004982AL4455281570345833WI-69931519.001 AF442818, AF449713, AL445528, M11725, M11880
S/G/Y/R/B/O NT_004982AL5905601571455633WI-47461520.001 AL590560
S/G/Y/R/B/O NT_004982AL5134851572403223UTR-96281521.001 AL357565, AL513485
S/G/Y/R/B/O NT_004982AL5133021573142143      
S/G/Y/R/B/O NT_004982AL1219871573691511      
S/G/Y/R/B/O NT_004982AL1390111575362033WI-95241523.001AL121987, AF153274, AL121987, AL139011, AL359981
S/G/Y/R/B/O NT_004982AL1390111575367743IB2891524.001AL121987, AF153274, AL121987, AL139011, AL359981
S/G/Y/R/B/O NT_004982AL1390111575375603WI-79071522.001 AL139011, AL359981
S/G/Y/R/B/O NT_004982AL5132821575880963      
S/G/Y/R/B/O NT_004982AL4452301576989113WI-22821525.001 AL138932, AL445230
S/G/Y/R/B/O NT_004982AL1389301577631783      


  NT_004982 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004982AL1219851579474673D1S27711526.002AC027082, AC027082, AL121985, AL354714
S/G/Y/R/B/O NT_004982AL1219851580005853WI-89711527.002AC027082, AC027082, AL121985, AL354714
S/G/Y/R/B/O NT_004982AL1219851581193603D1S4841528.001 AL121985, AL354714
S/G/Y/R/B/O NT_004982AC0687281581633551WI-61371533.001 AC068728, AL354714
S/G/Y/R/B/O NT_004982 - CHLC.GATA61A061516.001AL591463, AL591463
S/G/Y/R/B/O NT_004982 - WI-83321529.001AL590714, AL590651, AL590714
S/G/Y/R/B/O NT_004982 - NIB16901530.001AL590714, AL590651, AL590714
S/G/Y/R/B/O NT_004982 - WI-48841531.000 AL354714
S/G/Y/R/B/O NT_004982 - D1S27051532.000 AL354714
S/G/Y/R/B/O NT_004982 - AFM234TG91534.001AC093894, AC093894