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  Chromosome 2 - YAC Map - Single Contig
 

Chromosome 2 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022171
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022171AC092683989169431      
S/G/Y/R/B/O NT_022171AC017099990900403      
S/G/Y/R/B/O NT_022171AC016699993204663      
S/G/Y/R/B/O NT_022171AC079337993729463      
S/G/Y/R/B/O NT_022171AC092591995327503      
S/G/Y/R/B/O NT_022171AC018691997102283WI-84382370.001 AC018691
S/G/Y/R/B/O NT_022171AC018691997686413D2S21752369.001AC112788, AC018691, AC112788
S/G/Y/R/B/O NT_022171AC112788998167761      
S/G/Y/R/B/O NT_022171AC092675998691163IB31009135.002AL162590, AC092675, AL162590
S/G/Y/R/B/O NT_022171AC0926751000005783D2S23112372.001 AC092675
S/G/Y/R/B/O NT_022171AC0101341000448133WI-88252373.001 AC010134
S/G/Y/R/B/O NT_022171AC0101341000891673D2S21872371.001 AC010134
S/G/Y/R/B/O NT_022171AC0101341001316903WI-11212368.001 AC010134
S/G/Y/R/B/O NT_022171AC0648601002165953      
S/G/Y/R/B/O NT_022171AC1098261003094881      
S/G/Y/R/B/O NT_022171AC0843771003934023      
S/G/Y/R/B/O NT_022171AC0190971006747653AFM176XF22374.001 AC019097
S/G/Y/R/B/O NT_022171AC1100831007297453      
S/G/Y/R/B/O NT_022171AC0925871007317393      
S/G/Y/R/B/O NT_022171AC0794471008160623WI-18872375.001 AC079447, AC092002
S/G/Y/R/B/O NT_022171AC0186901009967313WI-59122377.001 AC018690
S/G/Y/R/B/O NT_022171AC0186901011480993WI-66142378.001 AC018690
S/G/Y/R/B/O NT_022171AC0186901011484483WI-68492376.001 AC018690
S/G/Y/R/B/O NT_022171AC0933731012039023      
S/G/Y/R/B/O NT_022171AC0731181012272703      
S/G/Y/R/B/O NT_022171AC0107361013327543      
S/G/Y/R/B/O NT_022171AC1147931015350211      
S/G/Y/R/B/O NT_022171AC0214081015531111      
S/G/Y/R/B/O NT_022171AC0926671015543873      
S/G/Y/R/B/O NT_022171AC1047821017269613      
S/G/Y/R/B/O NT_022171AC0124931018749713      
S/G/Y/R/B/O NT_022171AC0685381021787613WI-84452380.001 AC068538
S/G/Y/R/B/O NT_022171AC0685381022077733D2S22092381.001 AC068538
S/G/Y/R/B/O NT_022171AC0928451022391353AFMB299YD52379.001 AC092845
S/G/Y/R/B/O NT_022171AC0921681022982043      
S/G/Y/R/B/O NT_022171AC1068911024569313      
S/G/Y/R/B/O NT_022171AC0167381025880133WI-96942382.001 AB061830, AC016738
S/G/Y/R/B/O NT_022171AC0137221026730723      
S/G/Y/R/B/O NT_022171AC0736431028786483      
S/G/Y/R/B/O NT_022171AC0997971029208193      
S/G/Y/R/B/O NT_022171AC0925701029557113      
S/G/Y/R/B/O NT_022171AC0938941031825723AFM234TG91534.001 AC093894
S/G/Y/R/B/O NT_022171AC0070051033851483D2S22642383.001 AC007005
S/G/Y/R/B/O NT_022171AC0050351033906183      
S/G/Y/R/B/O NT_022171AC0071651035841263      
S/G/Y/R/B/O NT_022171AC0072711036297393      
S/G/Y/R/B/O NT_022171AC0072481038669643WI-45022384.001 AC007248, AC079346
S/G/Y/R/B/O NT_022171AC0072781041064943D2S3732385.001 AC007278, AC069485
S/G/Y/R/B/O NT_022171AC0072391041731363      
S/G/Y/R/B/O NT_022171AC0072511044720283D2S23562386.001 AC007251


  NT_022171 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022171AC1080511044930913      
S/G/Y/R/B/O NT_022171AC0739871046109663      
S/G/Y/R/B/O NT_022171AC0108811047613173      
S/G/Y/R/B/O NT_022171AC0115931049342443      
S/G/Y/R/B/O NT_022171AC0925681050643933      
S/G/Y/R/B/O NT_022171AC0188801050943273      
S/G/Y/R/B/O NT_022171AC0210151052193523      
S/G/Y/R/B/O NT_022171AC0965481053681493      
S/G/Y/R/B/O NT_022171AC0137271054392823WI-42902389.001 AC011673, AC013727, AC021341
S/G/Y/R/B/O NT_022171AC0137271054492423CHLC.GATA88C052388.001 AC011673, AC013727, AC021341
S/G/Y/R/B/O NT_022171AC0965541055830123      
S/G/Y/R/B/O NT_022171AC0977231057256953      
S/G/Y/R/B/O NT_022171AC1059261058123143      
S/G/Y/R/B/O NT_022171AC0685351059025793AFMB059WC12390.001AC105926, AC105926
S/G/Y/R/B/O NT_022171AC0685351060743463CHLC.GATA13H012391.001 AC068535
S/G/Y/R/B/O NT_022171AC0134021060784613      
S/G/Y/R/B/O NT_022171AC0680571063286763WI-95182392.001 AC068057
S/G/Y/R/B/O NT_022171AC0680571063523973CHLC.ATA1B012393.001 AC068057
S/G/Y/R/B/O NT_022171AC0187301064450613CHLC.ATA19E112394.001 AC018730
S/G/Y/R/B/O NT_022171AC0187301064770223D2S1352395.001 AC018730
S/G/Y/R/B/O NT_022171AC0108841065116093      
S/G/Y/R/B/O NT_022171AC1070801066485813      
S/G/Y/R/B/O NT_022171AC1046551066604893      
S/G/Y/R/B/O NT_022171AC0123601067541053      
S/G/Y/R/B/O NT_022171AC1080581069530231      
S/G/Y/R/B/O NT_022171AC0682731069936693      
S/G/Y/R/B/O NT_022171AC0188021071746853      
S/G/Y/R/B/O NT_022171AC0976501072966783      
S/G/Y/R/B/O NT_022171AC0109781073127843      
S/G/Y/R/B/O NT_022171AC0095051074848773D2S1762399.001 AC009505
S/G/Y/R/B/O NT_022171AC0095051074955323WI-99002396.001 AC009505
S/G/Y/R/B/O NT_022171AC0095051075119513D2S18972398.001 AC009505
S/G/Y/R/B/O NT_022171AC0095051075283353WI-45212397.001 AC009505
S/G/Y/R/B/O NT_022171AC0188781076648393WI-60812400.001 AC018878
S/G/Y/R/B/O NT_022171AC0921061077820481      
S/G/Y/R/B/O NT_022171AC0156431078358381      
S/G/Y/R/B/O NT_022171 - WI-100032387.001AC114491, AC114491