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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_030040
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030040AL591543389694241WI-30289148.001 AL591543
S/G/Y/R/B/O NT_030040AL353728319373553      
S/G/Y/R/B/O NT_030040AL160407321030943      
S/G/Y/R/B/O NT_030040AL161444322534473CHLC.GATA71E089127.001 AL161444
S/G/Y/R/B/O NT_030040AL451138322792633      
S/G/Y/R/B/O NT_030040AL589825323945363      
S/G/Y/R/B/O NT_030040AL513167324501143      
S/G/Y/R/B/O NT_030040AL353573326520933CHLC.GATA5E069128.001 AL353573
S/G/Y/R/B/O NT_030040AL161783326825483      
S/G/Y/R/B/O NT_030040AL353671327922403      
S/G/Y/R/B/O NT_030040AL589642329458253      
S/G/Y/R/B/O NT_030040AL157884331998712AFMA153TD99129.001 AC015553, AL157884
S/G/Y/R/B/O NT_030040AL353717332117393      
S/G/Y/R/B/O NT_030040AL162590333676803IB31009135.002AC092675, AC092675, AL162590
S/G/Y/R/B/O NT_030040AL162590333868823WI-53409134.001 AL162590
S/G/Y/R/B/O NT_030040AL161445334402993WI-75349137.001 AL161445
S/G/Y/R/B/O NT_030040AL161445334640343D9S17889130.001 AL161445
S/G/Y/R/B/O NT_030040AL161445334849933D9S18459132.001 AL161445
S/G/Y/R/B/O NT_030040AL161445335014803D9S1659131.001 AL161445
S/G/Y/R/B/O NT_030040AL356472336210593WI-56569133.001 AC027812, AC034144, AL356472
S/G/Y/R/B/O NT_030040AL356218336845353      
S/G/Y/R/B/O NT_030040AL139008339494883D9S18789136.001 AF029308, AL139008
S/G/Y/R/B/O NT_030040AL356489339833483      
S/G/Y/R/B/O NT_030040AL358573341138873      
S/G/Y/R/B/O NT_030040AL139113341268853      
S/G/Y/R/B/O NT_030040AL354989343181653      
S/G/Y/R/B/O NT_030040AL160051344681553      
S/G/Y/R/B/O NT_030040AL353662344977873      
S/G/Y/R/B/O NT_030040AL356494346637853      
S/G/Y/R/B/O NT_030040AL160270347455351      
S/G/Y/R/B/O NT_030040AL450283349426491      
S/G/Y/R/B/O NT_030040AL162231349724663      
S/G/Y/R/B/O NT_030040AL589645351588993      
S/G/Y/R/B/O NT_030040AL355377352052221      
S/G/Y/R/B/O NT_030040AL353795354547643D9S16391.001 AL353795, AL391668
S/G/Y/R/B/O NT_030040AL354669355532713      
S/G/Y/R/B/O NT_030040AL160274356504291WI-55999138.001 AL160274
S/G/Y/R/B/O NT_030040AL592145357660663      
S/G/Y/R/B/O NT_030040AL133476357699512      
S/G/Y/R/B/O NT_030040AL357874359217773      
S/G/Y/R/B/O NT_030040AL133410360081053      
S/G/Y/R/B/O NT_030040AL135841362885953D9S18049139.001 AL135841
S/G/Y/R/B/O NT_030040AL138834363031693      
S/G/Y/R/B/O NT_030040AL158830364264823      
S/G/Y/R/B/O NT_030040AL161792366178183      
S/G/Y/R/B/O NT_030040AL354935367212613D9S17919140.001 AL354935
S/G/Y/R/B/O NT_030040AL354932368164713      
S/G/Y/R/B/O NT_030040AL442063369723603      
S/G/Y/R/B/O NT_030040AL450267371664173WI-76779141.001 AL450267, AP002388
S/G/Y/R/B/O NT_030040AL161781372353033      


  NT_030040 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030040AL603912373923993      
S/G/Y/R/B/O NT_030040AL512604375501513D9S18749142.001 AL512604
S/G/Y/R/B/O NT_030040AL358118376034293WI-4719143.001AL158155, AC024283, AL158155
S/G/Y/R/B/O NT_030040AL158155376035273      
S/G/Y/R/B/O NT_030040AL158156377938633      
S/G/Y/R/B/O NT_030040AL513165378387762WI-94259144.001 AL513165
S/G/Y/R/B/O NT_030040AL591470380271923      
S/G/Y/R/B/O NT_030040AL138752380994013WI-69509145.001 AL138752, AL139414
S/G/Y/R/B/O NT_030040AL583849382730733      
S/G/Y/R/B/O NT_030040AL161448384229913WI-7289146.001 AL161448
S/G/Y/R/B/O NT_030040AL445986384821033      
S/G/Y/R/B/O NT_030040AL135785386826783GCT17B099147.001 AL135785
S/G/Y/R/B/O NT_030040AL390794387651833      
S/G/Y/R/B/O NT_030040AL390726388141743