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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_017568
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017568AC0023201040768441      
S/G/Y/R/B/O NT_017568AL4491051041369391      
S/G/Y/R/B/O NT_017568AL4493051043175243D9S2629327.001 AL449305
S/G/Y/R/B/O NT_017568AL4493051043494843STSG-100039326.001 AL449305
S/G/Y/R/B/O NT_017568AL4493051043788883WI-30309329.001 AL449305
S/G/Y/R/B/O NT_017568AL1370661044305433WI-62079325.001 AL137066
S/G/Y/R/B/O NT_017568AL3594551045223063D9S1069324.001 AL359455
S/G/Y/R/B/O NT_017568AL3594551045223493D9S2799323.001 AL359455
S/G/Y/R/B/O NT_017568AL3594551046011183WI-67999322.001AC002320, AC002320, AL359455
S/G/Y/R/B/O NT_017568AL1627271046957913AFMB315ZH99321.001 AC022644, AL162727
S/G/Y/R/B/O NT_017568AL1627271047103143D9S2899318.001 AC022644, AL162727
S/G/Y/R/B/O NT_017568AL1627271047115083WI-64329320.001 AC022644, AL162727
S/G/Y/R/B/O NT_017568AL1577021047385523WI-25259319.001 AC022644, AL157702
S/G/Y/R/B/O NT_017568AL1623931048768483      
S/G/Y/R/B/O NT_017568AL1378501050610503      
S/G/Y/R/B/O NT_017568AL4455431051867923      
S/G/Y/R/B/O NT_017568AL3567961053270193      
S/G/Y/R/B/O NT_017568AL1388951054525923      
S/G/Y/R/B/O NT_017568AL1602751056873343CHLC.GGAT3C119337.001 AL160275, AL645562
S/G/Y/R/B/O NT_017568AL3902401058057343D9S18559336.001 AL390240, AL645562
S/G/Y/R/B/O NT_017568AL1334121058643693      
S/G/Y/R/B/O NT_017568AL1624251060776233WI-90729338.001 AL162425
S/G/Y/R/B/O NT_017568AL1624251061445093AFM206ZE39341.001 AL162425
S/G/Y/R/B/O NT_017568AL1624251061932653D9S1559340.001 AL353589
S/G/Y/R/B/O NT_017568AL3556011062566293CHLC.GATA27B079339.001 AL353589, AL355601
S/G/Y/R/B/O NT_017568AB0208691063402363      
S/G/Y/R/B/O NT_017568AB0208701064382383      
S/G/Y/R/B/O NT_017568AB0208711065382383      
S/G/Y/R/B/O NT_017568AB0208721066382383      
S/G/Y/R/B/O NT_017568AB0208731067539513CHLC.GGAA16D029343.001 AB020873, AL691420
S/G/Y/R/B/O NT_017568AB0208731067846853D9S1779342.001 AB020873
S/G/Y/R/B/O NT_017568AB0208741068382383      
S/G/Y/R/B/O NT_017568AB0208751069382383      
S/G/Y/R/B/O NT_017568AB0208761070813363WI-30429344.001 AB020876, AC018530, AL691426
S/G/Y/R/B/O NT_017568AB0208771071382383      
S/G/Y/R/B/O NT_017568AB0208781073184553CHLC.GGAT11B019345.001 AB020878
S/G/Y/R/B/O NT_017568AL3531411073487633      
S/G/Y/R/B/O NT_017568AL1370241073920413D9S1709346.001 AL137024
S/G/Y/R/B/O NT_017568AL1370241074475723WI-46209350.001 AL137024
S/G/Y/R/B/O NT_017568AL1370241074671153CHLC.GGAT2B03.10909347.001 AC032004, AL137024
S/G/Y/R/B/O NT_017568AL1370241074850723WI-80109348.001 AC007940, AC032004, AL137024
S/G/Y/R/B/O NT_017568AL6699631075236693      
S/G/Y/R/B/O NT_017568AL1332821075248823      
S/G/Y/R/B/O NT_017568AL1332841076654083D9S1549349.001 AL133284
S/G/Y/R/B/O NT_017568AL1578291079384253CHLC.GATA61E129351.001 AL157829
S/G/Y/R/B/O NT_017568AL3920851079712493      
S/G/Y/R/B/O NT_017568AL3549811082156801WI-55789352.001 AL354981
S/G/Y/R/B/O NT_017568AL3556081082396033      
S/G/Y/R/B/O NT_017568AL3587921083721933      
S/G/Y/R/B/O NT_017568AL4456441085412743D9S18119353.001 AL356386, AL445644


  NT_017568 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017568AL1616301085746873      
S/G/Y/R/B/O NT_017568AL1602721088067511D9S18649357.001 AL160272
S/G/Y/R/B/O NT_017568AL3547541089185413      
S/G/Y/R/B/O NT_017568AL4456631090340733      
S/G/Y/R/B/O NT_017568AL1588311093829393WI-55239356.001 AL158831
S/G/Y/R/B/O NT_017568AL3651951094155203CHLC.GATA64G079355.001 AL365195
S/G/Y/R/B/O NT_017568AL3651951094575843WI-40629354.001 AL365195
S/G/Y/R/B/O NT_017568AL4454401094738193      
S/G/Y/R/B/O NT_017568AL3555921096376523      
S/G/Y/R/B/O NT_017568AL5897031098081023      
S/G/Y/R/B/O NT_017568AL1577801098547992      
S/G/Y/R/B/O NT_017568AL5126021100129133      
S/G/Y/R/B/O NT_017568AL4453101100567303D9S18489361.001 AL445310
S/G/Y/R/B/O NT_017568AL3537731102487793IB30899359.001 AC006239, AL353773
S/G/Y/R/B/O NT_017568AL1388941103853603AFMA239ZE19358.001 AL138894
S/G/Y/R/B/O NT_017568AL1388941104461813WI-62579363.001 AL138894
S/G/Y/R/B/O NT_017568AL1388941104491513D9S1959362.001 AL138894
S/G/Y/R/B/O NT_017568AL3536301104641273      
S/G/Y/R/B/O NT_017568AC0062881107434623WI-13069365.001AL445683, AC006288, AL445683
S/G/Y/R/B/O NT_017568AC0062881107621783AFMA239XA99364.001AL445683, AC006288, AL445683
S/G/Y/R/B/O NT_017568AL4456831107657113      
S/G/Y/R/B/O NT_017568AL3549311109786343CHLC.GGAA23B109367.001 AL354931
S/G/Y/R/B/O NT_017568AL4419891110705853WI-57259366.001 AL441989
S/G/Y/R/B/O NT_017568AL3555891112461913D9S2589368.001 AC006952, AL355589
S/G/Y/R/B/O NT_017568AL5925491113121973CHLC.GATA65D119369.001 AC006952, AL592549
S/G/Y/R/B/O NT_017568AL3537361113912713      
S/G/Y/R/B/O NT_017568AL3918701115381433      
S/G/Y/R/B/O NT_017568AL5906421116173673WI-30209370.001 AC110007, AL353761, AL590642
S/G/Y/R/B/O NT_017568AL1388361116865043WI-35609371.001AC015881, AC015881, AL138836, AL353761
S/G/Y/R/B/O NT_017568AL1619111118401453      
S/G/Y/R/B/O NT_017568AC0158811119493211      
S/G/Y/R/B/O NT_017568 - D9S1749328.001AL162588, AL162588
S/G/Y/R/B/O NT_017568 - WI-29899330.001AL139041, AL139041
S/G/Y/R/B/O NT_017568 - WI-54149331.001AL139041, AL139041
S/G/Y/R/B/O NT_017568 - WI-47919332.001AL139041, AL139041
S/G/Y/R/B/O NT_017568 - CHLC.GATA48D079333.002AC016904, AL162732, AC016904, AL162732
S/G/Y/R/B/O NT_017568 - D9S18569334.001AL158824, AC073213, AL158824, AL355533
S/G/Y/R/B/O NT_017568 - WI-35849335.001AL390067, AC025899, AC067868, AL390067
S/G/Y/R/B/O NT_017568 - D9S18729360.000 AC006239