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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_023935
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023935AC024486698414611      
S/G/Y/R/B/O NT_023935AL354700698490983      
S/G/Y/R/B/O NT_023935AL353705700385563WI-94199195.001 AL353705
S/G/Y/R/B/O NT_023935AL353594700635913      
S/G/Y/R/B/O NT_023935AL592448701585823      
S/G/Y/R/B/O NT_023935AL445684701605763      
S/G/Y/R/B/O NT_023935AL592221702986673      
S/G/Y/R/B/O NT_023935AL592047705949863WI-43989196.001 AL353690, AL592047
S/G/Y/R/B/O NT_023935AL354675707381543D9S1539197.001 AL354675
S/G/Y/R/B/O NT_023935AL359642707810483      
S/G/Y/R/B/O NT_023935AL512634709380833AFMA101XD19199.001 AL512634
S/G/Y/R/B/O NT_023935AL160166710257253D9S17809198.001 AL160166
S/G/Y/R/B/O NT_023935AL450243711324303      
S/G/Y/R/B/O NT_023935AL358975711979383      
S/G/Y/R/B/O NT_023935AL445252713941753      
S/G/Y/R/B/O NT_023935AL353813714138523      
S/G/Y/R/B/O NT_023935AL161912716068883D9S18679201.001 AC023067, AL161912
S/G/Y/R/B/O NT_023935AL161912716959703D9S18439200.001 AC023067, AL161912
S/G/Y/R/B/O NT_023935AL161782717073423      
S/G/Y/R/B/O NT_023935AL160168717827412      
S/G/Y/R/B/O NT_023935AL161780719319433      
S/G/Y/R/B/O NT_023935AL354937721251203CHLC.GATA21F059203.001 AL354937
S/G/Y/R/B/O NT_023935AL390788722746883AFM273VB19205.001 AC011876, AL390788
S/G/Y/R/B/O NT_023935AL160267722825403      
S/G/Y/R/B/O NT_023935AL353707724388553      
S/G/Y/R/B/O NT_023935AL138749725641283      
S/G/Y/R/B/O NT_023935AL354682727961843CHLC.GATA63A079204.001 AL354682
S/G/Y/R/B/O NT_023935AL353666728589593      
S/G/Y/R/B/O NT_023935AL445672729207573      
S/G/Y/R/B/O NT_023935AL162397731175973AFMB358XE99202.001 AL162397
S/G/Y/R/B/O NT_023935AL161727731517513      
S/G/Y/R/B/O NT_023935AL353682733098603      
S/G/Y/R/B/O NT_023935AL365190734000913      
S/G/Y/R/B/O NT_023935AL591368734875593      
S/G/Y/R/B/O NT_023935AL158154737010482CHLC.GAAT4F029208.001 AL158154, AL355380
S/G/Y/R/B/O NT_023935AL355985737222103      
S/G/Y/R/B/O NT_023935AL158047737851793      
S/G/Y/R/B/O NT_023935AL357032740326373CHLC.GATA3D049207.001 AL357032
S/G/Y/R/B/O NT_023935AL162726740982462      
S/G/Y/R/B/O NT_023935AL356490742920703      
S/G/Y/R/B/O NT_023935AL353774744354643D9S17859209.001 AL353774
S/G/Y/R/B/O NT_023935AL133391745943423D9S2649206.001 AL133391
S/G/Y/R/B/O NT_023935AL359202746196583      
S/G/Y/R/B/O NT_023935AL499602748463403CHLC.GATA74G059211.001 AL499602
S/G/Y/R/B/O NT_023935AL671136749257513D9S1679210.001AL137847, AL137847, AL671136
S/G/Y/R/B/O NT_023935AL137847749267703      
S/G/Y/R/B/O NT_023935AL161786751081982CHLC.GATA22H049214.001 AC012232, AL161786
S/G/Y/R/B/O NT_023935AL161786751427262WI-24149212.001 AC012232, AL161786
S/G/Y/R/B/O NT_023935AL353641752118183      
S/G/Y/R/B/O NT_023935AL450026752473953D9S1529213.001 AL450026


  NT_023935 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023935AL354920753274593      
S/G/Y/R/B/O NT_023935AL662787754961633      
S/G/Y/R/B/O NT_023935AL354733755577683      
S/G/Y/R/B/O NT_023935AC012279757453471      
S/G/Y/R/B/O NT_023935AL390838757713983      
S/G/Y/R/B/O NT_023935AL356134759651073      
S/G/Y/R/B/O NT_023935AL353787760528103      
S/G/Y/R/B/O NT_023935AL157886761344493      
S/G/Y/R/B/O NT_023935AL354692762894043      
S/G/Y/R/B/O NT_023935AL390777764731683WI-48609215.001 AC013261, AL390777
S/G/Y/R/B/O NT_023935AL390777765673433IB35599216.001 AC007524, AL390777
S/G/Y/R/B/O NT_023935AL596132765871153AFMB335WB19217.001 AL596132
S/G/Y/R/B/O NT_023935AL445532767009113      
S/G/Y/R/B/O NT_023935AL354897768705403      
S/G/Y/R/B/O NT_023935AL159991769985323      
S/G/Y/R/B/O NT_023935AL583827770538993D9S17909218.001 AL583827
S/G/Y/R/B/O NT_023935AL451132772334393CHLC.GATA11E119222.001 AL451132
S/G/Y/R/B/O NT_023935AL451131773030883WI-23319221.001 AL451131
S/G/Y/R/B/O NT_023935AL451131773083383WI-94479219.001 AL451131
S/G/Y/R/B/O NT_023935AL157882773956941D9S18659223.001 AL157882
S/G/Y/R/B/O NT_023935AL353743775227173      
S/G/Y/R/B/O NT_023935AL161453777044813      
S/G/Y/R/B/O NT_023935AL161447777827963WI-67589224.001 AL161447
S/G/Y/R/B/O NT_023935AL450106778955313      
S/G/Y/R/B/O NT_023935AL137849780211993WI-84291913.002AC012451, AC012451, AL137849
S/G/Y/R/B/O NT_023935AL353678780724363      
S/G/Y/R/B/O NT_023935AL158828781415183      
S/G/Y/R/B/O NT_023935AL353613783713833WI-99059225.001 AL353613
S/G/Y/R/B/O NT_023935AL159996784529443      
S/G/Y/R/B/O NT_023935AL158149786412013      
S/G/Y/R/B/O NT_023935AL513318787631882D9S16809227.001 AL513318
S/G/Y/R/B/O NT_023935AL513318788246692AFMA223XD59226.001 AC021249, AL513318
S/G/Y/R/B/O NT_023935AL158205788925933      
S/G/Y/R/B/O NT_023935AL136367789587643      
S/G/Y/R/B/O NT_023935AL353752790335952      
S/G/Y/R/B/O NT_023935AL161787792095163      
S/G/Y/R/B/O NT_023935AL591852793273273      
S/G/Y/R/B/O NT_023935AL160279794650323NIB7229228.001 AL160279, AL645762
S/G/Y/R/B/O NT_023935AL160279794877573WI-75419229.001 AL160279, AL645762