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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008470
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AC007800907871751      
S/G/Y/R/B/O NT_008470AL136084907928583      
S/G/Y/R/B/O NT_008470AL354923909793113D9S2729273.001 AL354923
S/G/Y/R/B/O NT_008470AL354923909934313WI-40179274.001 AL354923
S/G/Y/R/B/O NT_008470AL354923910603273WI-73449275.001 AL354923
S/G/Y/R/B/O NT_008470AL162427910776533      
S/G/Y/R/B/O NT_008470AL137067912863233D9S1769278.001 AC009830, AC027143, AL137067
S/G/Y/R/B/O NT_008470AL137067913769963WI-37909276.001AL589846, AL137067, AL589846
S/G/Y/R/B/O NT_008470AL589846913789763      
S/G/Y/R/B/O NT_008470AL162394914605863D9S17839277.001 AL162394
S/G/Y/R/B/O NT_008470AL138835915629123      
S/G/Y/R/B/O NT_008470AL359710916565273      
S/G/Y/R/B/O NT_008470AL358937918305673      
S/G/Y/R/B/O NT_008470AL360084919754563      
S/G/Y/R/B/O NT_008470AL137072920003033      
S/G/Y/R/B/O NT_008470AL356798921711333      
S/G/Y/R/B/O NT_008470AL445214922906453WI-6889280.001 AL445214
S/G/Y/R/B/O NT_008470AL445214922976053NIB14379279.001 AL445214
S/G/Y/R/B/O NT_008470AL353805923705111D9S1739281.001 AL353805
S/G/Y/R/B/O NT_008470AL353805924659951D9S18579283.001 AL353805
S/G/Y/R/B/O NT_008470AL354917924810023      
S/G/Y/R/B/O NT_008470AL390876925922593      
S/G/Y/R/B/O NT_008470AL357293928422573WI-99139282.001 AL357293
S/G/Y/R/B/O NT_008470AL162395928784263      
S/G/Y/R/B/O NT_008470AL357935929392863      
S/G/Y/R/B/O NT_008470AL161631931063333      
S/G/Y/R/B/O NT_008470AL359893933153543WI-68899288.001 AL359893
S/G/Y/R/B/O NT_008470AL359893933282713D9S16909286.001 AL359893
S/G/Y/R/B/O NT_008470AL359893933527053D9S19529287.001 AL359893
S/G/Y/R/B/O NT_008470AL353621933887993WI-20089284.001 AL353621
S/G/Y/R/B/O NT_008470AL353621934110753WI-84909285.001 AC002469, AL353621
S/G/Y/R/B/O NT_008470AL591377935308943      
S/G/Y/R/B/O NT_008470AL356516936720393      
S/G/Y/R/B/O NT_008470AL133413937664391      
S/G/Y/R/B/O NT_008470AL360018939402763WI-44529289.001 AL360018
S/G/Y/R/B/O NT_008470AL596454939430513      
S/G/Y/R/B/O NT_008470AL355588940528013      
S/G/Y/R/B/O NT_008470AL391867941740763      
S/G/Y/R/B/O NT_008470AL137021943419093AFM206YC79290.002 AC009555, AL137021
S/G/Y/R/B/O NT_008470AL442644944189783      
S/G/Y/R/B/O NT_008470AL354701945791423      
S/G/Y/R/B/O NT_008470AL450312947085083      
S/G/Y/R/B/O NT_008470AL365396949435923D9S2719291.001 AL365396
S/G/Y/R/B/O NT_008470AL449304949830833      
S/G/Y/R/B/O NT_008470AL359679950202473      
S/G/Y/R/B/O NT_008470AL589823950397123      
S/G/Y/R/B/O NT_008470AL589844952221823      
S/G/Y/R/B/O NT_008470AL390962953781643      
S/G/Y/R/B/O NT_008470AL356576955477343      
S/G/Y/R/B/O NT_008470AL662794955676323      


  NT_008470 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AL590386955871133      
S/G/Y/R/B/O NT_008470AL512639957842893D9S1279292.001 AL512639
S/G/Y/R/B/O NT_008470AL590381958383972      
S/G/Y/R/B/O NT_008470AL161791960188273      
S/G/Y/R/B/O NT_008470AL354938961256483      
S/G/Y/R/B/O NT_008470AL596402963033863      
S/G/Y/R/B/O NT_008470AL512646963053803      
S/G/Y/R/B/O NT_008470AL450426964598403      
S/G/Y/R/B/O NT_008470AL359846965938423      
S/G/Y/R/B/O NT_008470AL353685967898103D9S539293.001 AF275948, AF287262
S/G/Y/R/B/O NT_008470AL359182969033623      
S/G/Y/R/B/O NT_008470AL669893969980793      
S/G/Y/R/B/O NT_008470AL591506970408463      
S/G/Y/R/B/O NT_008470AL590368972146683      
S/G/Y/R/B/O NT_008470AL450265973055783      
S/G/Y/R/B/O NT_008470AL161627973875063WI-95569294.001 AL161627
S/G/Y/R/B/O NT_008470AL158070975111013      
S/G/Y/R/B/O NT_008470AL627247976780063      
S/G/Y/R/B/O NT_008470AL592437977006353      
S/G/Y/R/B/O NT_008470AL592488977521603      
S/G/Y/R/B/O NT_008470AL392084979010043D9S1729296.001 AL392084
S/G/Y/R/B/O NT_008470AL392084979185903CHLC.GATA27.969295.001 AL392084
S/G/Y/R/B/O NT_008470AC036169980137051