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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008476
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008476AC074086818887211      
S/G/Y/R/B/O NT_008476AL583841818912213      
S/G/Y/R/B/O NT_008476AL391219821950223WI-80259242.001 AL391219
S/G/Y/R/B/O NT_008476AL354751822394863WI-28209243.001 AL354751
S/G/Y/R/B/O NT_008476AL136097823291483      
S/G/Y/R/B/O NT_008476AL137848825225363      
S/G/Y/R/B/O NT_008476AL157827826728773      
S/G/Y/R/B/O NT_008476AL137074828113853      
S/G/Y/R/B/O NT_008476AL136981828943243      
S/G/Y/R/B/O NT_008476AL389924830765043      
S/G/Y/R/B/O NT_008476AL451065831469063      
S/G/Y/R/B/O NT_008476AL390760833085953      
S/G/Y/R/B/O NT_008476AL354991834386623      
S/G/Y/R/B/O NT_008476AL583839836047333WI-29589246.002AC022082, AC022082, AL583839
S/G/Y/R/B/O NT_008476AL353629836662753D9S1979247.001 AL353629
S/G/Y/R/B/O NT_008476AL353629837281803IB32653171.001 AL353629
S/G/Y/R/B/O NT_008476AL359181838755853D9S1969248.001 AL359181
S/G/Y/R/B/O NT_008476AL442224839445843      
S/G/Y/R/B/O NT_008476AL357073840455411      
S/G/Y/R/B/O NT_008476AL360020841452082      
S/G/Y/R/B/O NT_008476AL158152843039183      
S/G/Y/R/B/O NT_008476AL669815844164353      
S/G/Y/R/B/O NT_008476AL691447844584941      
S/G/Y/R/B/O NT_008476AC083821844772661      
S/G/Y/R/B/O NT_008476AC087784844855211      
S/G/Y/R/B/O NT_008476AL358232845869383      
S/G/Y/R/B/O NT_008476AL161728847012783      
S/G/Y/R/B/O NT_008476AL157936848698073      
S/G/Y/R/B/O NT_008476AC015671849923661      
S/G/Y/R/B/O NT_008476AL353768850300593      
S/G/Y/R/B/O NT_008476AL354893851961213      
S/G/Y/R/B/O NT_008476AL157384854383173AFM203WH89251.001 AC027180
S/G/Y/R/B/O NT_008476AL446023854581443      
S/G/Y/R/B/O NT_008476AL161729856413682D9S18169250.001AC053475, AC053475, AL161729
S/G/Y/R/B/O NT_008476AC053475856877061      
S/G/Y/R/B/O NT_008476AC027096856923341      
S/G/Y/R/B/O NT_008476AL392185857053503      
S/G/Y/R/B/O NT_008476AL355536857750323      
S/G/Y/R/B/O NT_008476AL354861858330663D9S2879254.001 AC011845, AL354861
S/G/Y/R/B/O NT_008476AL354861859117873AFMA350XG19252.001 AC011845, AL354861
S/G/Y/R/B/O NT_008476AL354861859255333D9S18099253.001 AC011845, AL354861
S/G/Y/R/B/O NT_008476AL161454859582273      
S/G/Y/R/B/O NT_008476AL159167861112703WI-69379257.001 AC061980, AL159167
S/G/Y/R/B/O NT_008476AL159167861530553WI-20139256.001 AC061980, AL159167
S/G/Y/R/B/O NT_008476AL449403861781131WI-19419255.001 AL449403
S/G/Y/R/B/O NT_008476AL138754863455823      
S/G/Y/R/B/O NT_008476AL160269863645633WI-93509260.001 AL160269
S/G/Y/R/B/O NT_008476AL160269864069563D9S17869258.001 AL160269
S/G/Y/R/B/O NT_008476AL133477865693743AFMA086YF19259.001 AL133477
S/G/Y/R/B/O NT_008476AL133477866203773WI-63789261.001 AL133477


  NT_008476 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008476AL353578866563293      
S/G/Y/R/B/O NT_008476AL589843867910943      
S/G/Y/R/B/O NT_008476AL451122869317213      
S/G/Y/R/B/O NT_008476AL161629869699993      
S/G/Y/R/B/O NT_008476AL353649871300813D9S17979235.001 AC009900, AL353649
S/G/Y/R/B/O NT_008476AL389888871944913CHLC.GATA11A079236.001 AL389888
S/G/Y/R/B/O NT_008476AL389888873410633AFM240XD89237.001 AL389888
S/G/Y/R/B/O NT_008476AL161632873958053      
S/G/Y/R/B/O NT_008476AL354853873991043      
S/G/Y/R/B/O NT_008476AL353619875754263      
S/G/Y/R/B/O NT_008476AL446024877167253      
S/G/Y/R/B/O NT_008476AL354862877681282      
S/G/Y/R/B/O NT_008476AL162585879200813      
S/G/Y/R/B/O NT_008476AL355607879621223      
S/G/Y/R/B/O NT_008476AL158071881030512D9S17969240.002AC021580, AC021580, AL158071
S/G/Y/R/B/O NT_008476AL158071881281982WI-45779239.001 AL158071
S/G/Y/R/B/O NT_008476AL513353882530533      
S/G/Y/R/B/O NT_008476AL353645883637853WI-5329241.001 AL353645
S/G/Y/R/B/O NT_008476AL353764883857412      
S/G/Y/R/B/O NT_008476AL159999886522953D9S18159245.001 AL359391
S/G/Y/R/B/O NT_008476AL591214886772213D9S17819244.001 AL359391, AL591214
S/G/Y/R/B/O NT_008476AC016177887195571      
S/G/Y/R/B/O NT_008476 - D9S2809249.001AL445670, AL445670