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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008438
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008438AL445487980814673      
S/G/Y/R/B/O NT_008438AL137852982477981WI-51609297.001 AL137852
S/G/Y/R/B/O NT_008438AL359552983559073      
S/G/Y/R/B/O NT_008438AL360218984403772      
S/G/Y/R/B/O NT_008438AL389915986619303CHLC.GATA7C089299.001 AC073037, AL389915
S/G/Y/R/B/O NT_008438AL162389987783323WI-42869298.001 AC073037, AL162389
S/G/Y/R/B/O NT_008438AL353137988258903      
S/G/Y/R/B/O NT_008438AL358432989981303WI-100699300.001 AC068050, AL358432
S/G/Y/R/B/O NT_008438AC011877990286791D9S2619302.001 AC011877, AC068050
S/G/Y/R/B/O NT_008438AL353742990549913WI-39319301.001AC011877, AC011877, AC068050, AL353742
S/G/Y/R/B/O NT_008438AL137019992210823      
S/G/Y/R/B/O NT_008438AL353766994006243      
S/G/Y/R/B/O NT_008438AL669983995821663      
S/G/Y/R/B/O NT_008438AL358779996822393WI-51299303.001 AC025005, AL358779
S/G/Y/R/B/O NT_008438AL359692997860003      
S/G/Y/R/B/O NT_008438AL354797999725081NIB15299304.001 AC013783, AL354797
S/G/Y/R/B/O NT_008438AL6698941000485163      
S/G/Y/R/B/O NT_008438AL3588151000505103      
S/G/Y/R/B/O NT_008438AL3599631002464803D9S18359305.001 AC013568, AL359963
S/G/Y/R/B/O NT_008438AL3599631003315273WI-63179306.001 AC013568, AL359963
S/G/Y/R/B/O NT_008438AL4500251003743563      
S/G/Y/R/B/O NT_008438AL1627331003809592      
S/G/Y/R/B/O NT_008438AL1357891005725443D9S1609308.001 AL135789
S/G/Y/R/B/O NT_008438AL1357891006724893WI-20329307.001 AL135789
S/G/Y/R/B/O NT_008438AL1588291006997203      
S/G/Y/R/B/O NT_008438AL6272251008344433      
S/G/Y/R/B/O NT_008438AL3538061008364373      
S/G/Y/R/B/O NT_008438AL1588231009454903      
S/G/Y/R/B/O NT_008438AL3535981011190483      
S/G/Y/R/B/O NT_008438AL1581581011997993WI-78489309.001 AL158158
S/G/Y/R/B/O NT_008438AL1581581012825553D9S16759311.001 AL158158
S/G/Y/R/B/O NT_008438AL1581581013035293D9S18549312.001 AL158158
S/G/Y/R/B/O NT_008438AL1581581013221073WI-66639310.001 AL158158
S/G/Y/R/B/O NT_008438AL3549821013863513      
S/G/Y/R/B/O NT_008438AL5924631015034283      
S/G/Y/R/B/O NT_008438AL5133281015982073      
S/G/Y/R/B/O NT_008438AL1578811018290883IB2809315.001AL442064, AL157881, AL442064, AL590646, AP000882
S/G/Y/R/B/O NT_008438AL4420641019680523AFM317ZF19313.001AC007157, AC007157, AL442064
S/G/Y/R/B/O NT_008438AC0071571020567383D9S16839314.001AL365231, AL365231
S/G/Y/R/B/O NT_008438AL3652311020608783      
S/G/Y/R/B/O NT_008438AL1624141020695933      
S/G/Y/R/B/O NT_008438AL3546611022461823      
S/G/Y/R/B/O NT_008438AL1591681023841513      
S/G/Y/R/B/O NT_008438AL1357871025747933D9S16889317.001 AL135787
S/G/Y/R/B/O NT_008438AL1357871026132433WI-19999316.001 AL135787
S/G/Y/R/B/O NT_008438AL3564911026744093      
S/G/Y/R/B/O NT_008438AL3548771027327593      
S/G/Y/R/B/O NT_008438AL4420661028469953      
S/G/Y/R/B/O NT_008438AL1387561029353053      
S/G/Y/R/B/O NT_008438AL1588241031367903D9S18569334.001 AC073213, AL158824, AL355533


  NT_008438 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008438AL3590731032697183      
S/G/Y/R/B/O NT_008438AL1627321034297413CHLC.GATA48D079333.002AC016904, AC016904, AL162732
S/G/Y/R/B/O NT_008438AL4451871035197213      
S/G/Y/R/B/O NT_008438AL3900671036246993WI-35849335.001 AC025899, AC067868, AL390067
S/G/Y/R/B/O NT_008438AL3602351037079133      
S/G/Y/R/B/O NT_008438AL1390411038060523WI-47919332.001 AL139041
S/G/Y/R/B/O NT_008438AL1390411038195643WI-54149331.001 AL139041
S/G/Y/R/B/O NT_008438AL1390411038293793WI-29899330.001 AL139041
S/G/Y/R/B/O NT_008438AL1625881040148913D9S1749328.001 AL162588
S/G/Y/R/B/O NT_008438AC0116531040195351