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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_023974
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL357615203801641      
S/G/Y/R/B/O NT_023974AL163528203844021      
S/G/Y/R/B/O NT_023974AL357614203895161      
S/G/Y/R/B/O NT_023974AL445624230434521WI-2374985.001 AL445624
S/G/Y/R/B/O NT_023974AL391667205659273      
S/G/Y/R/B/O NT_023974AL391117206762693      
S/G/Y/R/B/O NT_023974AL645734208342093      
S/G/Y/R/B/O NT_023974AC017067209090903      
S/G/Y/R/B/O NT_023974AL603704210984633      
S/G/Y/R/B/O NT_023974AL583802211377003      
S/G/Y/R/B/O NT_023974AL161730212378263      
S/G/Y/R/B/O NT_023974AL157937214422093AFM234YH4993.001 AL157937
S/G/Y/R/B/O NT_023974AL354709216241383D9S1870992.001 AL354709
S/G/Y/R/B/O NT_023974AL354709216281983WI-5735991.001 AL354709
S/G/Y/R/B/O NT_023974AL449423217170083      
S/G/Y/R/B/O NT_023974AL359922218161633      
S/G/Y/R/B/O NT_023974AL355679219828193      
S/G/Y/R/B/O NT_023974AL137022220411943      
S/G/Y/R/B/O NT_023974AL353732223174863WI-9020989.001 AL353732
S/G/Y/R/B/O NT_023974AL162420223972923NIB1374990.001 AL162420
S/G/Y/R/B/O NT_023974AL512606225046503      
S/G/Y/R/B/O NT_023974AL390882225864361WI-7591988.001 AL390882
S/G/Y/R/B/O NT_023974AL390882226501161WI-7032987.001 AL390882
S/G/Y/R/B/O NT_023974AL662879227210211      
S/G/Y/R/B/O NT_023974AC018973227275451      
S/G/Y/R/B/O NT_023974AL392163227809343      
S/G/Y/R/B/O NT_023974AL445595229982641WI-1295983.001 AL445595
S/G/Y/R/B/O NT_023974AL354879230792363      
S/G/Y/R/B/O NT_023974AL627410231595063      
S/G/Y/R/B/O NT_023974AL163193231621073      
S/G/Y/R/B/O NT_023974AL513498232817523      
S/G/Y/R/B/O NT_023974AL512635234230973WI-7821984.001AL513498, AC002050, AL512635, AL513498, AL606844
S/G/Y/R/B/O NT_023974AL442637236518083      
S/G/Y/R/B/O NT_023974AL445623239572333WI-7383994.001AL161628, AC011060, AL161628, AL445623
S/G/Y/R/B/O NT_023974AL161628239880593      
S/G/Y/R/B/O NT_023974AL365204240984973      
S/G/Y/R/B/O NT_023974AL513317242275883      
S/G/Y/R/B/O NT_023974AL354777243679563      
S/G/Y/R/B/O NT_023974AL161724245663093GCT16E06996.001 AC010384, AC010471, AL161724, AP001391
S/G/Y/R/B/O NT_023974AL445241246493713      
S/G/Y/R/B/O NT_023974AL441928246923213      
S/G/Y/R/B/O NT_023974AL162232247994583D9S171997.001 AL162232, AP000379
S/G/Y/R/B/O NT_023974AL353811248251553      
S/G/Y/R/B/O NT_023974AL513333250453633D9S1679998.001 AL513333
S/G/Y/R/B/O NT_023974AL157830251370443WI-2415999.001 AL157830
S/G/Y/R/B/O NT_023974AL157830251453703AFM220XF2995.001 AL157830
S/G/Y/R/B/O NT_023974AL355975252149573      
S/G/Y/R/B/O NT_023974AL627260253446623      
S/G/Y/R/B/O NT_023974AL353772254534773      
S/G/Y/R/B/O NT_023974AL158074255675473      


  NT_023974 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL353730257236063D9S2659100.001 AL353730
S/G/Y/R/B/O NT_023974AL590322258488473      
S/G/Y/R/B/O NT_023974AL391475260552263WI-54969101.001 AL391475
S/G/Y/R/B/O NT_023974AL391649261284913      
S/G/Y/R/B/O NT_023974AL353753262278633WI-18609102.001 AC023574, AL353753
S/G/Y/R/B/O NT_023974AL353753262850683D9S2599103.001 AL353753
S/G/Y/R/B/O NT_023974AL353753263400603CHLC.GATA51G089104.001 AL353753
S/G/Y/R/B/O NT_023974AL356791264466923AFM218XG119105.001 AL356791
S/G/Y/R/B/O NT_023974AL592226264656423      
S/G/Y/R/B/O NT_023974AL356156265649813      
S/G/Y/R/B/O NT_023974AL590078266935793      
S/G/Y/R/B/O NT_023974AL442639268311441      
S/G/Y/R/B/O NT_023974AL451137269570433      
S/G/Y/R/B/O NT_023974AL356133270637733      
S/G/Y/R/B/O NT_023974AL355432272495781      
S/G/Y/R/B/O NT_023974AL355433273126813      
S/G/Y/R/B/O NT_023974AL133411274963903WI-78149106.001 AL133411
S/G/Y/R/B/O NT_023974AL133411275052623D9S1699107.001 AL133411
S/G/Y/R/B/O NT_023974AL163192276330753WI-35579108.001 AL163192
S/G/Y/R/B/O NT_023974AL451123277280873      
S/G/Y/R/B/O NT_023974AL355585278989633D9S1619109.001 AC025611, AL355585
S/G/Y/R/B/O NT_023974AL162396279656433WI-48469110.001 AL162396
S/G/Y/R/B/O NT_023974AL360014281039972D9S2639111.001 AL360014
S/G/Y/R/B/O NT_023974AL353746282042763WI-64099112.001 AL353746
S/G/Y/R/B/O NT_023974AL451124284101533WI-24559113.001 AL390250, AL451124
S/G/Y/R/B/O NT_023974AL596323284811143      
S/G/Y/R/B/O NT_023974AL353683286217713D9S16789115.001 AL353683
S/G/Y/R/B/O NT_023974AL353683286715183D9S2709116.001 AL353683
S/G/Y/R/B/O NT_023974AL445526287686113D9S18759114.001 AL445526
S/G/Y/R/B/O NT_023974AL592206288940013      
S/G/Y/R/B/O NT_023974AL450428289494983      
S/G/Y/R/B/O NT_023974AL158072290380343D9S1049118.001 AC025377, AL158072
S/G/Y/R/B/O NT_023974AL158072290473123D9S18689117.001 AC025377
S/G/Y/R/B/O NT_023974AL354758292432333WI-23789119.001 AC011784, AL354758
S/G/Y/R/B/O NT_023974AL360180293255713      
S/G/Y/R/B/O NT_023974AL162388294027043      
S/G/Y/R/B/O NT_023974AL353684295789553D9S529121.001 AL353684
S/G/Y/R/B/O NT_023974AL138893298263493CHLC.GATA12C069120.001 AC022901, AL138893
S/G/Y/R/B/O NT_023974AL354676298437863      
S/G/Y/R/B/O NT_023974AL513132299157263      
S/G/Y/R/B/O NT_023974AL590672300944253      
S/G/Y/R/B/O NT_023974AL451045301529573      
S/G/Y/R/B/O NT_023974AL392110303196683WI-55059122.001 AL392110
S/G/Y/R/B/O NT_023974AL392110303890713WI-56129123.001 AC041036, AL392110
S/G/Y/R/B/O NT_023974AL390883304039493      
S/G/Y/R/B/O NT_023974AL159995304783021      
S/G/Y/R/B/O NT_023974AL353808306413523      
S/G/Y/R/B/O NT_023974AL354704306836143      
S/G/Y/R/B/O NT_023974AL390844308123323      
S/G/Y/R/B/O NT_023974AL590726309759093      


  NT_023974 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023974AL353735310867953      
S/G/Y/R/B/O NT_023974AL353745311471293D9S439124.001 AL353745
S/G/Y/R/B/O NT_023974AL355582313113763D9S147E9125.001 AL355582
S/G/Y/R/B/O NT_023974AL354854314193632      
S/G/Y/R/B/O NT_023974AL353783315869131      
S/G/Y/R/B/O NT_023974AL162728317213623      
S/G/Y/R/B/O NT_023974AL590676317940823AFM113XG119126.001 AL590676