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  Chromosome 2 - YAC Map - Single Contig
 

Chromosome 2 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005367
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC019120316844101      
S/G/Y/R/B/O NT_005367AC021294317185971      
S/G/Y/R/B/O NT_005367AC092569317863113D2S3752140.001AC021294, AC021294, AC092569
S/G/Y/R/B/O NT_005367AC110756318760323      
S/G/Y/R/B/O NT_005367AC009301319687653D2S4002139.002 AC009301, AC107422
S/G/Y/R/B/O NT_005367AC009305320163063      
S/G/Y/R/B/O NT_005367AC015980322600843D2S22832142.001 AC015980
S/G/Y/R/B/O NT_005367AL121657323267043D2S3522141.001 AL121657
S/G/Y/R/B/O NT_005367AL121657323387263WI-43522143.001 AL121657
S/G/Y/R/B/O NT_005367AC016864324291141      
S/G/Y/R/B/O NT_005367AC073255324943123      
S/G/Y/R/B/O NT_005367AC109642326615071WI-54162138.001AC073255, AC015972, AC073255, AC109642
S/G/Y/R/B/O NT_005367AC104698327486543      
S/G/Y/R/B/O NT_005367AC016907330288043WI-33802136.001AC109363, AC016907, AC109363
S/G/Y/R/B/O NT_005367AC109363330646511      
S/G/Y/R/B/O NT_005367AC010743331216483      
S/G/Y/R/B/O NT_005367AC073168331341801      
S/G/Y/R/B/O NT_005367AC109822391393021CHLC.GATA86E022157.001 AC024286, AC040996
S/G/Y/R/B/O NT_005367AC074350331780463      
S/G/Y/R/B/O NT_005367AC009414333490803WI-97982159.001 AC009414
S/G/Y/R/B/O NT_005367AC007378335466713WI-108122161.001 AC007378, AC073041, AF168681
S/G/Y/R/B/O NT_005367AC007401336447703WI-78202160.001 AC007401, AC073041, AF168681
S/G/Y/R/B/O NT_005367AC007363336812593      
S/G/Y/R/B/O NT_005367AC007382339008723D2S21862162.001 AC007382
S/G/Y/R/B/O NT_005367AC007404339600343      
S/G/Y/R/B/O NT_005367AC007899341283403      
S/G/Y/R/B/O NT_005367AC007390342463103      
S/G/Y/R/B/O NT_005367AC007391343771273      
S/G/Y/R/B/O NT_005367AC104091345609183      
S/G/Y/R/B/O NT_005367AC006369346266203      
S/G/Y/R/B/O NT_005367AC010878348547533D2S1772163.001 AC010878
S/G/Y/R/B/O NT_005367AC079393349669083      
S/G/Y/R/B/O NT_005367AC016689350949303CHLC.ATA23F122165.001 AC011074, AC016689
S/G/Y/R/B/O NT_005367AC016689350950773CHLC.ATA21D112166.001 AC011074, AC016689
S/G/Y/R/B/O NT_005367AC009229351227133WI-79362164.001AC022097, AC009229, AC011074, AC022097
S/G/Y/R/B/O NT_005367AC009229352133703WI-103262167.001AC022097, AC009229, AC022097
S/G/Y/R/B/O NT_005367AC009229352547423AFM161XD102168.001 AC009229
S/G/Y/R/B/O NT_005367AC009229352576173WI-98912170.001AC022097, AC009229, AC022097
S/G/Y/R/B/O NT_005367AC016995353283063D2S22202169.001 AC016995
S/G/Y/R/B/O NT_005367AC093822354693503      
S/G/Y/R/B/O NT_005367AC011247355177073WI-43722171.001 AC011247
S/G/Y/R/B/O NT_005367AC011247355803923AFMB326YD52172.001 AC011247
S/G/Y/R/B/O NT_005367AC074366357723103D2S23312173.001 AC011152, AC074366
S/G/Y/R/B/O NT_005367AC092833358158111      
S/G/Y/R/B/O NT_005367AC018693358192713      
S/G/Y/R/B/O NT_005367AC019171359833963      
S/G/Y/R/B/O NT_005367AC092672361618413      
S/G/Y/R/B/O NT_005367AC079615362403623      
S/G/Y/R/B/O NT_005367AC007684363189813WI-38932174.001 AC007684
S/G/Y/R/B/O NT_005367AC073403365135981      


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AL121654365140433      
S/G/Y/R/B/O NT_005367AL133247366676673      
S/G/Y/R/B/O NT_005367AL133249368079423      
S/G/Y/R/B/O NT_005367AL121652369861853WI-95342144.001 AC010981, AC022481, AC090853, AL121652
S/G/Y/R/B/O NT_005367AL121652369881143AFM116ZD22145.001 AC010981, AC022481, AC090853, AL121652
S/G/Y/R/B/O NT_005367AL121652369926053D2S23512146.001 AC022481, AC090853, AL121652
S/G/Y/R/B/O NT_005367AL121655371270163      
S/G/Y/R/B/O NT_005367AJ246003372263533      
S/G/Y/R/B/O NT_005367AL121658373547023WI-96682147.001AL121653, AL121653, AC011232, AL121653, AL121653, AL121658, AL121658
S/G/Y/R/B/O NT_005367AL121653373661733      
S/G/Y/R/B/O NT_005367AL133245374461043      
S/G/Y/R/B/O NT_005367AL133243375580993      
S/G/Y/R/B/O NT_005367AC079837377022783      
S/G/Y/R/B/O NT_005367AL133246377065603      
S/G/Y/R/B/O NT_005367AL121656380625323D2S23252148.001AL133244, AL133244, AC020598, AL121656, AL121656, AL133244, AL133244
S/G/Y/R/B/O NT_005367AL121656380702333WI-30952149.001AL133244, AL133244, AC020598, AL121656, AL121656, AL133244, AL133244
S/G/Y/R/B/O NT_005367AL133244380902503      
S/G/Y/R/B/O NT_005367AC019195384010523CHLC.GAAT11D012150.001 AC019195
S/G/Y/R/B/O NT_005367AC019195384054603WI-30672152.001AC019127, AC019127, AC019195
S/G/Y/R/B/O NT_005367AC019127384168813WI-42082151.001 AC019127
S/G/Y/R/B/O NT_005367AC020594385866093WI-75142153.001 AC020594
S/G/Y/R/B/O NT_005367AC017050387005623      
S/G/Y/R/B/O NT_005367AC093393387691363      
S/G/Y/R/B/O NT_005367AC069303388875863      
S/G/Y/R/B/O NT_005367AC097506390485541      
S/G/Y/R/B/O NT_005367AC080040390593921      
S/G/Y/R/B/O NT_005367AC073081392248533WI-98202158.001AC109822, AC040996, AC073081, AC092430, AC109822
S/G/Y/R/B/O NT_005367AC068546392802483      
S/G/Y/R/B/O NT_005367AC068274393828233CHLC.GATA22E062154.001 AC068274
S/G/Y/R/B/O NT_005367AC013407395955873WI-108342155.001 AC013407
S/G/Y/R/B/O NT_005367AC083939396896013D2S23742156.001 AC080072, AC083939
S/G/Y/R/B/O NT_005367AC110765397700463      
S/G/Y/R/B/O NT_005367AC013442398686563      
S/G/Y/R/B/O NT_005367AC079352399839403      
S/G/Y/R/B/O NT_005367AC019064401401203      
S/G/Y/R/B/O NT_005367AC012593402301693      
S/G/Y/R/B/O NT_005367AC104666403962433      
S/G/Y/R/B/O NT_005367AC073218404161273      
S/G/Y/R/B/O NT_005367AC073874405643903      
S/G/Y/R/B/O NT_005367AC068599405808513      
S/G/Y/R/B/O NT_005367AC011748407230793      
S/G/Y/R/B/O NT_005367AC008170408499163      
S/G/Y/R/B/O NT_005367AC009499410420573      
S/G/Y/R/B/O NT_005367AC105759412476011      
S/G/Y/R/B/O NT_005367AC016735413274443      
S/G/Y/R/B/O NT_005367AC093609414686381      
S/G/Y/R/B/O NT_005367AC010883414871623      
S/G/Y/R/B/O NT_005367AC092838417026943      
S/G/Y/R/B/O NT_005367AC104138418131183      
S/G/Y/R/B/O NT_005367AC092615418151123      


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC084264419934583      
S/G/Y/R/B/O NT_005367AC011242421151713      
S/G/Y/R/B/O NT_005367AC084265422223073D2S1192184.001AC108476, AC084265, AC108476, AF351814
S/G/Y/R/B/O NT_005367AC084265422906033D2S22982186.001AC108476, AC108476
S/G/Y/R/B/O NT_005367AC108476423205773      
S/G/Y/R/B/O NT_005367AC087053423870321WI-5002185.001 AC087053
S/G/Y/R/B/O NT_005367AC019129423881223      
S/G/Y/R/B/O NT_005367AC013717426863133UTR-9884222.001 AC013717
S/G/Y/R/B/O NT_005367AC016703427275463      
S/G/Y/R/B/O NT_005367AC019184427591173      
S/G/Y/R/B/O NT_005367AC012455429514893      
S/G/Y/R/B/O NT_005367AC067957431060263WI-3495221.001 AC067791, AC067957
S/G/Y/R/B/O NT_005367AC012354432101013      
S/G/Y/R/B/O NT_005367AC093702433792671      
S/G/Y/R/B/O NT_005367AC022097434218211      
S/G/Y/R/B/O NT_005367AC007388434284913      
S/G/Y/R/B/O NT_005367AC104171435804523      
S/G/Y/R/B/O NT_005367AC007246435824463      
S/G/Y/R/B/O NT_005367AC007253437299203      
S/G/Y/R/B/O NT_005367AC007254440846743WI-76922179.001 AC007254
S/G/Y/R/B/O NT_005367AC007377442240863WI-95512178.001 AC007377, AC010447
S/G/Y/R/B/O NT_005367AC093586442357303      
S/G/Y/R/B/O NT_005367AC007281443980113AFMB335XC12177.001 AC007281
S/G/Y/R/B/O NT_005367AC106048444211773D2S23282176.001AC007877, AC007877, AC106048, Y13034
S/G/Y/R/B/O NT_005367AC007877444216613      
S/G/Y/R/B/O NT_005367AC007317446387393D2S22722175.001 AC007317, AC079189
S/G/Y/R/B/O NT_005367AC020720447655073      
S/G/Y/R/B/O NT_005367AC008270448428493      
S/G/Y/R/B/O NT_005367AC009300450085823      
S/G/Y/R/B/O NT_005367AC009223451183213      
S/G/Y/R/B/O NT_005367AC097536453002653      
S/G/Y/R/B/O NT_005367AC093400454928183      
S/G/Y/R/B/O NT_005367AC010739456637983WI-40612181.001 AC010739
S/G/Y/R/B/O NT_005367AC009413457236193D2S21722180.001 AC009413
S/G/Y/R/B/O NT_005367AC104654458611461      
S/G/Y/R/B/O NT_005367AC016722458869543      
S/G/Y/R/B/O NT_005367AC020604460367493      
S/G/Y/R/B/O NT_005367AC018682462309583WI-79992194.002AC018804, AC018682, AC018804, AC020680
S/G/Y/R/B/O NT_005367AC018682462325893WI-72572193.001 AC018682, AC020680
S/G/Y/R/B/O NT_005367AC016912463472643WI-32202192.001AC018682, AC016912, AC018682, AC020680
S/G/Y/R/B/O NT_005367AC016696464884563      
S/G/Y/R/B/O NT_005367AC017006466294403D2S3912191.001 AC017006
S/G/Y/R/B/O NT_005367AC017006467752733D2S21822189.001 AC017006
S/G/Y/R/B/O NT_005367AC017006467822963D2S23782190.001 AC017006
S/G/Y/R/B/O NT_005367AC079892467894403      
S/G/Y/R/B/O NT_005367AC017078468069543      
S/G/Y/R/B/O NT_005367AC115109470009333      
S/G/Y/R/B/O NT_005367AC092600470562893      
S/G/Y/R/B/O NT_005367U51244471076253      
S/G/Y/R/B/O NT_005367AC012072471749963      


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC008179473042933D2S22802188.001 AC008179
S/G/Y/R/B/O NT_005367AC009236475508843WI-39762187.001 AC009236
S/G/Y/R/B/O NT_005367AC093833476389383      
S/G/Y/R/B/O NT_005367AC083949479067193      
S/G/Y/R/B/O NT_005367AC096668480160153      
S/G/Y/R/B/O NT_005367AC006038480899863      
S/G/Y/R/B/O NT_005367AC025750482729353      
S/G/Y/R/B/O NT_005367AC074375484223021      
S/G/Y/R/B/O NT_005367AC093386485378153      
S/G/Y/R/B/O NT_005367AC098824486145393WI-84072183.001 AC098824, AC111200
S/G/Y/R/B/O NT_005367AC098824486168573D2S22592182.001 AC098824
S/G/Y/R/B/O NT_005367 - D2S23832137.000