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  Chromosome 2 - YAC Map - Single Contig
 

Chromosome 2 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022135
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC0687441262077481D2S1122482.001 AC068744, AC098800
S/G/Y/R/B/O NT_022135AC0116381261821571      
S/G/Y/R/B/O NT_022135AC0219011261889991      
S/G/Y/R/B/O NT_022135AP0013691262146821      
S/G/Y/R/B/O NT_022135AC0843671262245981      
S/G/Y/R/B/O NT_022135AC1054221263188543      
S/G/Y/R/B/O NT_022135AC0167211264835113WI-62122445.001 AC016721
S/G/Y/R/B/O NT_022135AC0926331265609373WI-39152446.001 AC092633
S/G/Y/R/B/O NT_022135AC1122481266807053      
S/G/Y/R/B/O NT_022135AC0794521267177663      
S/G/Y/R/B/O NT_022135AC1089401268943391      
S/G/Y/R/B/O NT_022135AC1044051269404013      
S/G/Y/R/B/O NT_022135AC0797731270318273WI-19602480.001 AC079773
S/G/Y/R/B/O NT_022135AC0797731270365333D2S22192483.001 AC079773
S/G/Y/R/B/O NT_022135AC0109741270720713      
S/G/Y/R/B/O NT_022135AC0169091273386373WI-33062485.001 AC016909
S/G/Y/R/B/O NT_022135AC0124891273838403AFMA272ZG92484.001 AC012489
S/G/Y/R/B/O NT_022135AC0117551275193883D2S22562486.001 AC011755, AC068691
S/G/Y/R/B/O NT_022135AC0108901277054283WI-88982487.001 AC010890
S/G/Y/R/B/O NT_022135AC0119961277740083AFMB334WB92488.001 AC011996
S/G/Y/R/B/O NT_022135AC0112431279399773AFMA281ZD12489.001 AC011243
S/G/Y/R/B/O NT_022135AC0112431279843293D2S1142490.001 AC011243
S/G/Y/R/B/O NT_022135AC0188771280392753      
S/G/Y/R/B/O NT_022135AC1072091281208311      
S/G/Y/R/B/O NT_022135AC0167591283403283WI-48832491.001 AC016759
S/G/Y/R/B/O NT_022135AC0167591283478063AFMA130ZA92492.001 AC016759
S/G/Y/R/B/O NT_022135AC0926231283691983      
S/G/Y/R/B/O NT_022135AC1156251285776471WI-85492493.001 AC068456, AC115625
S/G/Y/R/B/O NT_022135AC0924551285580251      
S/G/Y/R/B/O NT_022135AC0410081285704271      
S/G/Y/R/B/O NT_022135AC0169061286106463      
S/G/Y/R/B/O NT_022135AC0132761287936913      
S/G/Y/R/B/O NT_022135AC0137181288817623WI-32332497.002 AC013718, AC019282, AC106815
S/G/Y/R/B/O NT_022135AC0137181288847023WI-67312495.002 AC013718, AC019282, AC106815
S/G/Y/R/B/O NT_022135AC0137181288848233NIB19282496.002 AC013718, AC019282, AC106815
S/G/Y/R/B/O NT_022135AC0938921290209403      
S/G/Y/R/B/O NT_022135AC1106201291300181      
S/G/Y/R/B/O NT_022135AC0167251292681753      
S/G/Y/R/B/O NT_022135AC0206021294323553      
S/G/Y/R/B/O NT_022135AC0170311295975823      
S/G/Y/R/B/O NT_022135AC0124501297474853      
S/G/Y/R/B/O NT_022135AC0648501299291803      
S/G/Y/R/B/O NT_022135AC0167421299460783      
S/G/Y/R/B/O NT_022135AC0118931301291463CHLC.GATA3H092498.001 AC011893, AC012551
S/G/Y/R/B/O NT_022135AC0118931301291513CHLC.GATA4D072499.001 AC011893, AC012551
S/G/Y/R/B/O NT_022135AC0118931302252443AFMA338YE52500.001 AC011893, AC012551
S/G/Y/R/B/O NT_022135AC0119991303369853WI-71152501.001 AC011999, AC016516
S/G/Y/R/B/O NT_022135AC0933911303605303      
S/G/Y/R/B/O NT_022135AC0684921304800263      
S/G/Y/R/B/O NT_022135AC1122551306503061      


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC0925921307831513      
S/G/Y/R/B/O NT_022135AC0101461309321333CHLC.GATA8H052503.001 AC010146
S/G/Y/R/B/O NT_022135AC0927861310436923      
S/G/Y/R/B/O NT_022135AC0101001312094793D2S3142504.001 AC010100, AC079808
S/G/Y/R/B/O NT_022135AC0101001312204263AFMB351WA92505.001 AC010100
S/G/Y/R/B/O NT_022135AC0101001312346743D2S23762506.001 AC010100
S/G/Y/R/B/O NT_022135AC0108731312401713      
S/G/Y/R/B/O NT_022135AC0112311314344753D2S23852508.001 AC011231, AC027600
S/G/Y/R/B/O NT_022135AC0120001315395783      
S/G/Y/R/B/O NT_022135AC0190671317364463WI-24502509.001 AC019067
S/G/Y/R/B/O NT_022135AC0190671317873353D2S23672511.001 AC019067
S/G/Y/R/B/O NT_022135AC0170821319927503D2S22882512.001 AC017082
S/G/Y/R/B/O NT_022135AC0170821320068193WI-28572510.001 AC017082
S/G/Y/R/B/O NT_022135AC0166791320835613      
S/G/Y/R/B/O NT_022135AC0206011321707733      
S/G/Y/R/B/O NT_022135AC0193041323729371      
S/G/Y/R/B/O NT_022135AC0936741324420083WI-46502513.001AC019304, AC019304, AC093674, AF181971
S/G/Y/R/B/O NT_022135AC0693941324661413      
S/G/Y/R/B/O NT_022135AC0975231326773113WI-32292514.002 AC097523, AC097523
S/G/Y/R/B/O NT_022135AC0975231326818683WI-32292514.002 AC097523, AC097523
S/G/Y/R/B/O NT_022135AC0977211327462043      
S/G/Y/R/B/O NT_022135AC1147631343588791WI-42792515.001 AC114763
S/G/Y/R/B/O NT_022135AC0788511330800023D2S1502520.001 AC068090, AC068626, AC078851
S/G/Y/R/B/O NT_022135AC0921661330932073      
S/G/Y/R/B/O NT_022135AC0124971331275083      
S/G/Y/R/B/O NT_022135AC0167101333376143      
S/G/Y/R/B/O NT_022135AC0620211334314503      
S/G/Y/R/B/O NT_022135AC0132651335298993D2S3972518.001 AC011174
S/G/Y/R/B/O NT_022135AC0132651335580253WI-48192519.001 AC011174, AC013265
S/G/Y/R/B/O NT_022135AC0123521336624773      
S/G/Y/R/B/O NT_022135AC1093451338286193      
S/G/Y/R/B/O NT_022135AC0234681338641823      
S/G/Y/R/B/O NT_022135AC0928371340836243D2S23042517.001 AC092837
S/G/Y/R/B/O NT_022135AC0928371341391143WI-100102516.001 AC092837
S/G/Y/R/B/O NT_022135AC1104211341788763      
S/G/Y/R/B/O NT_022135AC0926201341936723      
S/G/Y/R/B/O NT_022135AC0246971345116653      
S/G/Y/R/B/O NT_022135AC0797621346607153      
S/G/Y/R/B/O NT_022135AC0620161348280623AFM309XB12447.001 AC062016
S/G/Y/R/B/O NT_022135AC0620161349669823CHLC.GATA6A03.1892448.001 AC062016
S/G/Y/R/B/O NT_022135AC0124491350882783WI-30472449.001 AC012449
S/G/Y/R/B/O NT_022135AC0123651351169443      
S/G/Y/R/B/O NT_022135AC0921701353027923      
S/G/Y/R/B/O NT_022135AC0190571353260073      
S/G/Y/R/B/O NT_022135AC0648701355109033      
S/G/Y/R/B/O NT_022135AC0648561356423813      
S/G/Y/R/B/O NT_022135AC0093121357480873      
S/G/Y/R/B/O NT_022135AC0094041359509213      
S/G/Y/R/B/O NT_022135AC0093031360636043      
S/G/Y/R/B/O NT_022135AC0939011362620563      


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC1070771364212091      
S/G/Y/R/B/O NT_022135AC0124441365411803      
S/G/Y/R/B/O NT_022135AC0186861367177473      
S/G/Y/R/B/O NT_022135AC0738371369409143      
S/G/Y/R/B/O NT_022135AC0126651369429083      
S/G/Y/R/B/O NT_022135AC0134571370669473      
S/G/Y/R/B/O NT_022135AC0166731372713343AFMB027XG52452.001 AC016673
S/G/Y/R/B/O NT_022135AC0166731373639473D2S22542451.001 AC016673
S/G/Y/R/B/O NT_022135AC0167361375050263WI-77012450.001 AC016736
S/G/Y/R/B/O NT_022135AC0132751375414053      
S/G/Y/R/B/O NT_022135AC1048171377142273      
S/G/Y/R/B/O NT_022135AC0691541377311573      
S/G/Y/R/B/O NT_022135AC1040611378962893      
S/G/Y/R/B/O NT_022135AC0225941379436621      
S/G/Y/R/B/O NT_022135AC0236591379780181      
S/G/Y/R/B/O NT_022135AC0975321379836251      
S/G/Y/R/B/O NT_022135AC0988261381795713      
S/G/Y/R/B/O NT_022135AC0937871382976883      
S/G/Y/R/B/O NT_022135AJ2393221383826373      
S/G/Y/R/B/O NT_022135AC1035641384919303      
S/G/Y/R/B/O NT_022135AC1046681386711491      
S/G/Y/R/B/O NT_022135AC0166911386975623      
S/G/Y/R/B/O NT_022135AC0798791388792993      
S/G/Y/R/B/O NT_022135AC0123631388981723      
S/G/Y/R/B/O NT_022135AC1147321391135181      
S/G/Y/R/B/O NT_022135AC0732571392005833      
S/G/Y/R/B/O NT_022135AC0188661393210713      
S/G/Y/R/B/O NT_022135AC0170331394740543      
S/G/Y/R/B/O NT_022135AC0167641396559413      
S/G/Y/R/B/O NT_022135AC0679601398098093      
S/G/Y/R/B/O NT_022135AC0799881398715493      
S/G/Y/R/B/O NT_022135AC0133991399698563      
S/G/Y/R/B/O NT_022135AC0124471401682233WI-33072458.001 AC012447
S/G/Y/R/B/O NT_022135AC0794491403059733      
S/G/Y/R/B/O NT_022135AC0187371403951613D2S3432457.001 AC016063, AC018737
S/G/Y/R/B/O NT_022135AC0187371405067683IB13272456.001 AC018737
S/G/Y/R/B/O NT_022135AC0187371405258013WI-31922453.001 AC018737
S/G/Y/R/B/O NT_022135 - D2S22242454.001AC011246, AC011246
S/G/Y/R/B/O NT_022135 - D2S1102455.000  
S/G/Y/R/B/O NT_022135 - AFM200VG72459.001AC079404, AC079404
S/G/Y/R/B/O NT_022135 - WI-53432460.001AC079404, AC079404
S/G/Y/R/B/O NT_022135 - D2S3472461.001AC108219, AC108219
S/G/Y/R/B/O NT_022135 - CHLC.ATA10H072462.001AC064859, AC064859
S/G/Y/R/B/O NT_022135 - WI-58492463.001AC074362, AC013293, AC074362
S/G/Y/R/B/O NT_022135 - WI-64482464.001AC074362, AC013293, AC074362
S/G/Y/R/B/O NT_022135 - WI-46572465.001AC019159, AC019159, AC023003
S/G/Y/R/B/O NT_022135 - CHLC.GATA3A012466.001AC104842, AC104842
S/G/Y/R/B/O NT_022135 - WI-44602467.001AC012001, AC012001, AC012143, AC021309
S/G/Y/R/B/O NT_022135 - D2S23392468.001AC097499, AC097499
S/G/Y/R/B/O NT_022135 - WI-98542469.001AC023347, AC023347


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135 - WI-34542470.000  
S/G/Y/R/B/O NT_022135 - WI-24752471.001AC067962, AC067962
S/G/Y/R/B/O NT_022135 - WI-90542472.001AC068282, AC068282, AF378903, M11228
S/G/Y/R/B/O NT_022135 - D2S25582473.001AC027142, AC027142
S/G/Y/R/B/O NT_022135 - WI-10732474.001AC068483, AC068483
S/G/Y/R/B/O NT_022135 - WI-40232475.001AC013280, AC013280, AC037478
S/G/Y/R/B/O NT_022135 - CHLC.GGAT18B032476.001AC079586, AC013732, AC079586
S/G/Y/R/B/O NT_022135 - D2S22152477.001 AC013732
S/G/Y/R/B/O NT_022135 - WI-43492478.001AC084208, AC079450, AC084208
S/G/Y/R/B/O NT_022135 - WI-62242479.001AC010984, AC092602, AC010984, AC023040, AC092602
S/G/Y/R/B/O NT_022135 - WI-44402481.001AC018688, AC018688
S/G/Y/R/B/O NT_022135 - D2S3682494.001 AC106815
S/G/Y/R/B/O NT_022135 - D2S712507.001AC010505, AC010505