Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_029860
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029860AC0648671063006551      
S/G/Y/R/B/O NT_029860AC1144971063720891D1S27591373.001 AC026941, AC114497
S/G/Y/R/B/O NT_029860AL5907241064312453      
S/G/Y/R/B/O NT_029860AL5906311064563443      
S/G/Y/R/B/O NT_029860AL6720141066080602      
S/G/Y/R/B/O NT_029860AL5896651067066641      
S/G/Y/R/B/O NT_029860AC0193181068063131      
S/G/Y/R/B/O NT_029860AL5128441068281493      
S/G/Y/R/B/O NT_029860AL4510521069871663      
S/G/Y/R/B/O NT_029860AL5911621070950303      
S/G/Y/R/B/O NT_029860AL3553061070979253      
S/G/Y/R/B/O NT_029860AL6065261072029853      
S/G/Y/R/B/O NT_029860AC1035961074223161D1S2391378.001 AC103596
S/G/Y/R/B/O NT_029860AL1624021073492031      
S/G/Y/R/B/O NT_029860AC0931191074678663CHLC.ATA25E071381.001AL162402, AL162402, AC093119, AL162402, AL162402
S/G/Y/R/B/O NT_029860AC0931191075798873CHLC.ATA20H111380.001 AC093119
S/G/Y/R/B/O NT_029860AL4996051076591211D1S2481379.001 AL499605
S/G/Y/R/B/O NT_029860AL5963271077516193      
S/G/Y/R/B/O NT_029860AL6271691078443563      
S/G/Y/R/B/O NT_029860AL5904531078771563      
S/G/Y/R/B/O NT_029860AL6458581080626173      
S/G/Y/R/B/O NT_029860AC0743761080909861      
S/G/Y/R/B/O NT_029860AL3555391080921261      
S/G/Y/R/B/O NT_029860AL5904271081812791      
S/G/Y/R/B/O NT_029860AL6071331082995232      
S/G/Y/R/B/O NT_029860AC0160851084498131      
S/G/Y/R/B/O NT_029860AC1144911086100961WI-100032387.001 AC114491
S/G/Y/R/B/O NT_029860AL5132061086751363      
S/G/Y/R/B/O NT_029860AL5910421087832603      
S/G/Y/R/B/O NT_029860AC0214011089292881      
S/G/Y/R/B/O NT_029860AL3538921089396962      
S/G/Y/R/B/O NT_029860AL3912351089701783      
S/G/Y/R/B/O NT_029860AL3900361090447593      
S/G/Y/R/B/O NT_029860AL3592581092257963      
S/G/Y/R/B/O NT_029860AL3561101094125181      
S/G/Y/R/B/O NT_029860AL6720861094312101      
S/G/Y/R/B/O NT_029860AL3900381094441123      
S/G/Y/R/B/O NT_029860AL3920881095357883D1S27781386.001 AL392088
S/G/Y/R/B/O NT_029860AC0260721095700911      
S/G/Y/R/B/O NT_029860AL1601711096242081AFMB014ZB91383.001AC026072, AC026072
S/G/Y/R/B/O NT_029860AL1601711096769441IB10281382.001AC026072, AC026072, AL160171
S/G/Y/R/B/O NT_029860AL1601711097030171WI-57491387.001AC026072, AL354724, AC026072, AL160171, AL354724
S/G/Y/R/B/O NT_029860AL3547241097342671      
S/G/Y/R/B/O NT_029860AL5917191097346683      
S/G/Y/R/B/O NT_029860AL4492661100081713IB32581388.001AC016518, AC016518, AL358592, AL449266
S/G/Y/R/B/O NT_029860AL4492661100081713WI-67741389.001AC016518, AC016518, AL358592, AL449266
S/G/Y/R/B/O NT_029860AL3564881100116343      
S/G/Y/R/B/O NT_029860AC0165181100999491      
S/G/Y/R/B/O NT_029860AL4504681101188703WI-53211384.001 AL450468
S/G/Y/R/B/O NT_029860AL1588471102297963D1S2211395.001 AL158847


  NT_029860 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029860AC0000321102771953      
S/G/Y/R/B/O NT_029860AC0000311103236833WI-71671392.001AL355310, AC000031, AL353702, AL355310
S/G/Y/R/B/O NT_029860AC0000311103274803WI-86336395.001AL355310, AC000031, AC011780, AL353702, AL355310, M96233
S/G/Y/R/B/O NT_029860AL3553101103948253WI-91361393.001 AL355310, X54048
S/G/Y/R/B/O NT_029860AL3551451104010872      
S/G/Y/R/B/O NT_029860AC0733641105039141      
S/G/Y/R/B/O NT_029860AL3567351105152323      
S/G/Y/R/B/O NT_029860AL3902521106790933IB3581391.001 AL157901, AL390252
S/G/Y/R/B/O NT_029860AL3563891107404243      
S/G/Y/R/B/O NT_029860AL1389331108502233GCT8C071390.001AC011645, AC011645, AL138933
S/G/Y/R/B/O NT_029860AC0116451109195831      
S/G/Y/R/B/O NT_029860 - WI-87821385.001AC004882, AC005529, AC004882, AC005529
S/G/Y/R/B/O NT_029860 - WI-91161394.000