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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004483
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004483AL390880734309051      
S/G/Y/R/B/O NT_004483AC096948735593123WI-27691252.001AC103591, AC096948, AC103591
S/G/Y/R/B/O NT_004483AC103591735927873      
S/G/Y/R/B/O NT_004483AC093118737542613D1S26141253.001 AC093118
S/G/Y/R/B/O NT_004483AL136459737613793      
S/G/Y/R/B/O NT_004483AC096531737812173      
S/G/Y/R/B/O NT_004483AL158841739515033      
S/G/Y/R/B/O NT_004483AL136324741303553D1S28761254.001 AL136324
S/G/Y/R/B/O NT_004483AL136324741486333WI-73381255.001AL672168, AL136324, AL354946, AL672168
S/G/Y/R/B/O NT_004483AL672168741807131      
S/G/Y/R/B/O NT_004483AC104837742156023      
S/G/Y/R/B/O NT_004483AC099674743668673      
S/G/Y/R/B/O NT_004483AL596269745093873      
S/G/Y/R/B/O NT_004483AC098651746335433D1S28411256.001AC093430, AC093430, AC098651
S/G/Y/R/B/O NT_004483AC093430746799151      
S/G/Y/R/B/O NT_004483AC024013747084231      
S/G/Y/R/B/O NT_004483AL122000748206533D1S26181257.001 AL122000
S/G/Y/R/B/O NT_004483AL353651748800343      
S/G/Y/R/B/O NT_004483AL606527751157613D1S5001258.001 AL606527
S/G/Y/R/B/O NT_004483AL627106751500393      
S/G/Y/R/B/O NT_004483AL358533751892833      
S/G/Y/R/B/O NT_004483AL591173752906733      
S/G/Y/R/B/O NT_004483AL360080753768473WI-12241259.001 AL360080
S/G/Y/R/B/O NT_004483AC096532755671181      
S/G/Y/R/B/O NT_004483AC012528755905891      
S/G/Y/R/B/O NT_004483AC103592755943211      
S/G/Y/R/B/O NT_004483AC099769756743581      
S/G/Y/R/B/O NT_004483AC099672757000801      
S/G/Y/R/B/O NT_004483AC012109757059131      
S/G/Y/R/B/O NT_004483AC105279757464843WI-10661241.001AC012109, AC099672, AC012109, AC098655, AC099672, AC105279
S/G/Y/R/B/O NT_004483AC104458758295083GCT15A011242.001AC012109, AC012109, AC026066, AC104458
S/G/Y/R/B/O NT_004483AC099060759433681      
S/G/Y/R/B/O NT_004483AC116315759879001      
S/G/Y/R/B/O NT_004483AC114487760338901      
S/G/Y/R/B/O NT_004483AL451087761953371      
S/G/Y/R/B/O NT_004483AC026073762496911      
S/G/Y/R/B/O NT_004483AC093575763642413AFMA114ZD91250.001AC026073, AC026073
S/G/Y/R/B/O NT_004483AC095030764488413WI-40601249.001AC019136, AC026073, AC019136, AC026073, AC095030
S/G/Y/R/B/O NT_004483AC095030765166713D1S4991248.001AC019136, AC019136, AC095030, AL500523
S/G/Y/R/B/O NT_004483AC093433765232621WI-31011247.001AC019136, AC019136, AC093433, AL500523
S/G/Y/R/B/O NT_004483AC093433771922201D1S2161245.001AC073027, AC113935, AC073027, AC093433, AC113935
S/G/Y/R/B/O NT_004483AC019136765788691      
S/G/Y/R/B/O NT_004483AC026932766214791      
S/G/Y/R/B/O NT_004483AC069315767365691      
S/G/Y/R/B/O NT_004483AC024326768615251      
S/G/Y/R/B/O NT_004483AC096951769573463AFM312VG51240.001AL035409, AC096951, AL035409
S/G/Y/R/B/O NT_004483AL035409769923663CHLC.GAAT1D91246.001AC026874, AC026874, AL035409
S/G/Y/R/B/O NT_004483AL035409770294203WI-68911244.001AC026874, AC113935, AC026874, AC113935, AL035409
S/G/Y/R/B/O NT_004483AC026874770588571      
S/G/Y/R/B/O NT_004483AC113935770618821      


  NT_004483 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004483AC073027772552761      
S/G/Y/R/B/O NT_004483 - WI-46641229.001AL606535, AL606535
S/G/Y/R/B/O NT_004483 - CHLC.GATA26C121230.000  
S/G/Y/R/B/O NT_004483 - WI-11521231.001AC026490, AL590092, AC026490, AL590092
S/G/Y/R/B/O NT_004483 - CHLC.GATA5G07.5261232.001AL591463, AL591463
S/G/Y/R/B/O NT_004483 - WI-96251233.001AC018404, AC098692, AL354708, AC018404, AC098692, AL354708
S/G/Y/R/B/O NT_004483 - WI-18721234.001AC091611, AL355573, AC091611, AL355573, AL390740
S/G/Y/R/B/O NT_004483 - D1S4811235.001AC093156, AC093156
S/G/Y/R/B/O NT_004483 - WI-71051236.001AL357314, AL357314, AL359206, AL592082
S/G/Y/R/B/O NT_004483 - D1S28551237.001AL096829, AL096829
S/G/Y/R/B/O NT_004483 - WI-66871238.001AL357314, AC009337, AL357314, AL592082
S/G/Y/R/B/O NT_004483 - D1S4641239.001AC027384, AC027384
S/G/Y/R/B/O NT_004483 - WI-92501243.001U47924, U47924, X69723
S/G/Y/R/B/O NT_004483 - WI-60291251.000AC096948, AC103591, AC096948, AC103591