Chromosome 1 - YAC Map - Single Contig
Chromosome 1 - YAC Map - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Map Page
Whole Chromosome
Single Contigs
Line color code:
White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954
NT_004350
NT_022058
NT_004321
NT_004547
NT_021917
NT_028054
NT_032970
NT_032967
NT_021937
NT_004488
NT_022041
NT_004873
NT_030584
NT_004572
NT_029218
NT_004610
NT_032979
NT_004391
NT_030571
NT_004782
NT_028053
NT_004538
NT_004511
NT_004852
NT_032963
NT_032971
NT_032972
NT_031724
NT_004386
NT_032978
NT_032977
NT_004424
NT_032976
NT_032965
NT_032973
NT_031689
NT_029223
NT_004641
NT_029865
NT_031737
NT_004636
NT_032948
NT_004464
NT_032953
NT_004483
NT_004302
NT_032960
NT_032956
NT_032974
NT_004902
NT_026943
NT_029231
NT_004658
NT_004686
NT_021979
NT_030565
NT_028050
NT_004308
NT_004623
NT_030567
NT_032957
NT_021977
NT_029860
NT_019273
NT_031697
NT_004754
NT_032961
NT_032975
NT_022052
NT_022071
NT_004434
NT_032962
NT_021907
NT_004441
NT_030577
NT_004858
NT_019291
NT_031708
NT_029226
NT_026945
NT_004982
NT_032952
NT_004668
NT_029874
NT_004487
NT_032958
NT_004599
NT_031716
NT_004671
NT_021909
NT_004416
NT_029862
NT_021905
NT_032947
NT_021877
NT_004612
NT_031718
NT_032950
NT_004525
NT_032955
NT_029863
NT_032951
NT_021953
NT_004861
NT_031696
NT_004908
NT_004559
NT_031728
NT_021973
NT_004753
NT_004433
NT_030561
NT_004836
NT_031685
NT_004771
NT_004734
NT_031700
NT_031719
NT_004536
NT_032964
NT_031732
NT_032966
NT_031730
NT_029870
NT_032969
NT_032968
NT_004873
Links
Contig
Accession
Chr Start
Phs
STS Marker
YAC Chr
WI YAC
Plc
Other Accessions in Assembly
All Accessions
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL603890
12289114
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL603749
12377920
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL354712
12478233
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL359771
12652543
3
D1S228
1
8.00
1
 
AL359771
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL583942
12708640
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL031277
12723265
3
WI-478
1
9.00
1
 
AL031277
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL031273
12863014
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL033525
12919873
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
Z99291
13084674
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL357873
13181182
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL359873
13398024
3
WI-4136
1
11.00
1
 
AL359873
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL161427
13407435
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL358793
13484525
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL034395
13574959
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL031732
13694930
3
D1S507
1
12.00
1
 
AL031732
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL031293
13752533
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL445263
13858451
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL391215
13916873
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL035405
14035424
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL391094
14202357
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL158174
14246027
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL031283
14275137
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL512883
14449100
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL121992
14528710
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL606758
14699009
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL450998
14799981
3
WI-6040
1
98.00
2
AL121602
,
AL122001
,
AL121602, AL122001
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL034555
14878658
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL096775
14963556
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL451042
15039697
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL109627
15125795
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL358794
15244613
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL669962
15367562
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL137802
15374479
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AC015618
15486157
1
WI-9839
1
13.00
2
 
AL354666
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL713858
15514067
1
WI-9839
1
13.00
2
 
AL354666
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL137798
15641369
3
WI-8685
1
14.00
1
AC021338
,
AL021920
,
AC021338, AL021920, AL137798
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AL021920
15668096
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
AC021338
15755097
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
 
-
 
WI-971
1
10.00
0
 
AL023585
S
/
G
/
Y
/
R
/
B
/
O
NT_004873
 
-
 
WI-5834
1
15.00
1
AL139254
,
AL139254