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  Chromosome 1 - YAC Map - Single Contig
 

Chromosome 1 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004668
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004668AC0272051584411321      
S/G/Y/R/B/O NT_004668AC0252221584466751      
S/G/Y/R/B/O NT_004668AL4996161584945721      
S/G/Y/R/B/O NT_004668AL5903851585847351WI-102701535.001AC021370, AC021370, AL590385
S/G/Y/R/B/O NT_004668AC0739811585166751      
S/G/Y/R/B/O NT_004668AC0341291585237411      
S/G/Y/R/B/O NT_004668AC0162211585306341      
S/G/Y/R/B/O NT_004668AC0213701585924411      
S/G/Y/R/B/O NT_004668AL3595411586182821      
S/G/Y/R/B/O NT_004668AL4509951587769233      
S/G/Y/R/B/O NT_004668AL3918251587819323      
S/G/Y/R/B/O NT_004668AL5904081589915943      
S/G/Y/R/B/O NT_004668AL4501631592249293D1S26751536.001 AL450163
S/G/Y/R/B/O NT_004668AL4501631592796263GCT16C031537.001AC034129, AC034129, AL450163
S/G/Y/R/B/O NT_004668AL5127851593767323CHLC.GGAA5F091538.001AC027205, AC034129, AC027205, AC034129, AC040905, AL512785
S/G/Y/R/B/O NT_004668AL3596991594144073      
S/G/Y/R/B/O NT_004668AL5963251595275133D1S27681545.002AC040901, AC040901, AL596325
S/G/Y/R/B/O NT_004668AL4451971597287413WI-19341539.002 AC040908, AC069039, AL445197
S/G/Y/R/B/O NT_004668AL3920031598764423WI-51591544.001 AL392003
S/G/Y/R/B/O NT_004668AL3920031599322573CHLC.GATA70D011540.001 AL392003
S/G/Y/R/B/O NT_004668AL3920031599637253D1S28441543.001AC031977, AC031977, AL392003
S/G/Y/R/B/O NT_004668AL5838501600604233IB12621541.001AC031977, AC031977, AL583850
S/G/Y/R/B/O NT_004668AC0319771601373221      
S/G/Y/R/B/O NT_004668AL4510631601756593      
S/G/Y/R/B/O NT_004668AL5924351602422553      
S/G/Y/R/B/O NT_004668AL6038411604019343      
S/G/Y/R/B/O NT_004668AL5133071605746483CHLC.GGAA22G101549.001 AL358816, AL513307
S/G/Y/R/B/O NT_004668AL6631201606080953      
S/G/Y/R/B/O NT_004668AL1364571606609403WI-64361547.001 AL136457
S/G/Y/R/B/O NT_004668AL1364571606826823WI-41821548.001 AL136457
S/G/Y/R/B/O NT_004668AL6631211607069953      
S/G/Y/R/B/O NT_004668AL3558621607250453      
S/G/Y/R/B/O NT_004668AL3588751608255702      
S/G/Y/R/B/O NT_004668AL5962131609952053      
S/G/Y/R/B/O NT_004668AL3564281610229903      
S/G/Y/R/B/O NT_004668AL3575121612492143WI-49041550.001 AL357512
S/G/Y/R/B/O NT_004668AL5133641613777533      
S/G/Y/R/B/O NT_004668AL3571321614507043      
S/G/Y/R/B/O NT_004668AL3592551615382113      
S/G/Y/R/B/O NT_004668AL3910011617257683WI-11241552.001 AC024315
S/G/Y/R/B/O NT_004668AL3575681617820983WI-38531553.001 AC024315, AL357568
S/G/Y/R/B/O NT_004668AL3901191618211453      
S/G/Y/R/B/O NT_004668AL3600881621635883D1S26281555.001 AC025391, AC027244, AL360088
S/G/Y/R/B/O NT_004668AL3600881621715173AFMA341XB51562.001 AC025391, AC027244, AL360088
S/G/Y/R/B/O NT_004668AL3907301622326453WI-12251551.001 AC027639, AL390730
S/G/Y/R/B/O NT_004668AL5901121623219833D1S4261558.001 AC027639, AL590112
S/G/Y/R/B/O NT_004668AL1600581624521903D1S1941556.001 AC009625, AL160058
S/G/Y/R/B/O NT_004668AL1577141625397333WI-66751554.001 AC009625, AC064827, AL157714
S/G/Y/R/B/O NT_004668AL3564411625640743WI-98191557.001 AC064827, AL356441
S/G/Y/R/B/O NT_004668AL4510741626467703WI-85571560.001 AL451074


  NT_004668 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004668AL4510741626469893WI-92871559.001 AC064827, AL451074
S/G/Y/R/B/O NT_004668AL3581151628636413CHLC.ATA22C091561.001 AL358115
S/G/Y/R/B/O NT_004668AL6064951629173433      
S/G/Y/R/B/O NT_004668AL6267871630681933D1S26811563.001 AL626787
S/G/Y/R/B/O NT_004668AL5960871631061923      
S/G/Y/R/B/O NT_004668AL3901151633689553WI-57691564.001 AL390115
S/G/Y/R/B/O NT_004668AL5838041633854432      
S/G/Y/R/B/O NT_004668AL6119621635522803      
S/G/Y/R/B/O NT_004668AL3560051636333313      
S/G/Y/R/B/O NT_004668AL0086391637497563      
S/G/Y/R/B/O NT_004668AL0091821638992063NIB14921565.001 AL009182
S/G/Y/R/B/O NT_004668AL1588371639675533      
S/G/Y/R/B/O NT_004668AL4510501642310273D1S26301566.001 AL451050
S/G/Y/R/B/O NT_004668AL1369841642367173      
S/G/Y/R/B/O NT_004668AL3599621644043433      
S/G/Y/R/B/O NT_004668AL0317331645251983NIB15691567.001 AL031733, AL162257
S/G/Y/R/B/O NT_004668AL0317331646190693D1S1961568.001 AL031733
S/G/Y/R/B/O NT_004668AL3565321646833773      
S/G/Y/R/B/O NT_004668Z999431647447453D1S27501569.001 Z99943
S/G/Y/R/B/O NT_004668Z999431648346923D1S4311570.001 AC069147
S/G/Y/R/B/O NT_004668Z978761648361133      
S/G/Y/R/B/O NT_004668AL0312871649691833D1S4451571.001 AC026140, AC069147, AL031287
S/G/Y/R/B/O NT_004668AL0312871649887173WI-63471572.001 AC026140, AL031287
S/G/Y/R/B/O NT_004668AL0335311650071043      
S/G/Y/R/B/O NT_004668AL0335321651075893D1S27991573.001 AL033532
S/G/Y/R/B/O NT_004668AL0213971651369733      
S/G/Y/R/B/O NT_004668AL0090511652367783WI-63811574.001 AL009051
S/G/Y/R/B/O NT_004668AL0090511652369213NIB13861577.001 AL009051
S/G/Y/R/B/O NT_004668AL0090511652693553D1S26581575.001 AL009051
S/G/Y/R/B/O NT_004668AL0221001653830253D1S4331576.001 AL022100
S/G/Y/R/B/O NT_004668AL0237551654004853      
S/G/Y/R/B/O NT_004668AL1370751654880993      
S/G/Y/R/B/O NT_004668AL0317361654990853      
S/G/Y/R/B/O NT_004668AL3565731656464043      
S/G/Y/R/B/O NT_004668AL0497981656662493      
S/G/Y/R/B/O NT_004668AL0312751657954863AFM192YE31578.001 AL031275
S/G/Y/R/B/O NT_004668AL1359261658506923      
S/G/Y/R/B/O NT_004668AL5918621660091113      
S/G/Y/R/B/O NT_004668AL0317261660264283      
S/G/Y/R/B/O NT_004668AC0117321662582371      
S/G/Y/R/B/O NT_004668AC0253931663339801      
S/G/Y/R/B/O NT_004668AC0112211663399631      
S/G/Y/R/B/O NT_004668 - WI-92821542.001 AC040908
S/G/Y/R/B/O NT_004668 - D1S1041546.001AC021153, AC021153