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  Chromosome 8 - YAC Map - Single Contig
 

Chromosome 8 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_008046
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AC009627925608981      
S/G/Y/R/B/O NT_008046AC026572925789831      
S/G/Y/R/B/O NT_008046AC024026925847261      
S/G/Y/R/B/O NT_008046AC024041925938581      
S/G/Y/R/B/O NT_008046AC027242927654242AFMA338YC98369.001AC009627, AC022825, AC009627, AC022825, AC027242
S/G/Y/R/B/O NT_008046AC022825929035622D8S18188368.001AC016885, AC016885, AC022825
S/G/Y/R/B/O NT_008046AC016885930130752WI-52098370.001 AC016885
S/G/Y/R/B/O NT_008046AC023125929436511      
S/G/Y/R/B/O NT_008046AC024738930714001      
S/G/Y/R/B/O NT_008046AC011118931877443WI-42358371.001AC024738, AC011118, AC024738
S/G/Y/R/B/O NT_008046AC090687932371512WI-39978372.001AC024738, AC024738, AC090687
S/G/Y/R/B/O NT_008046AF172274933626551      
S/G/Y/R/B/O NT_008046AC010834934231841      
S/G/Y/R/B/O NT_008046AP004282936987063WI-69578373.001 AP004282
S/G/Y/R/B/O NT_008046AP003351937439013      
S/G/Y/R/B/O NT_008046AP003478939596583AFM225YF28375.001 AC022810, AP003478
S/G/Y/R/B/O NT_008046AP003478939614063WI-6018374.001 AC021576, AC022810, AP003478
S/G/Y/R/B/O NT_008046AP003478940121533AFM074WD118377.001 AC020776, AC021576, AC022810, AP003478
S/G/Y/R/B/O NT_008046AP003478940237203WI-79458376.001AP003534, AC020776, AC021576, AC022810, AP003478, AP003534
S/G/Y/R/B/O NT_008046AP003534940489093      
S/G/Y/R/B/O NT_008046AP003690942088223      
S/G/Y/R/B/O NT_008046AP004218943439863D8S17948378.001AC108860, AC016495, AC023632, AC108860, AP004218
S/G/Y/R/B/O NT_008046AC009692944547751WI-53561227.002AL356600, AC009692, AC009694, AL356600
S/G/Y/R/B/O NT_008046AC013693944276451      
S/G/Y/R/B/O NT_008046AC108860944630412      
S/G/Y/R/B/O NT_008046AC084253945118441      
S/G/Y/R/B/O NT_008046AC105328945417352      
S/G/Y/R/B/O NT_008046AC025733945690511      
S/G/Y/R/B/O NT_008046AC106856945845082      
S/G/Y/R/B/O NT_008046AC090802947446953      
S/G/Y/R/B/O NT_008046AC015561948839691      
S/G/Y/R/B/O NT_008046AC018525949597761      
S/G/Y/R/B/O NT_008046AP003692951386103WI-58648379.001 AP003692
S/G/Y/R/B/O NT_008046AC087752951616233      
S/G/Y/R/B/O NT_008046AP003552953235913D8S16998380.001 AC068189, AP003552
S/G/Y/R/B/O NT_008046AC018801953409843      
S/G/Y/R/B/O NT_008046AP003466955181143      
S/G/Y/R/B/O NT_008046AC024995956179383      
S/G/Y/R/B/O NT_008046AC083836957618822      
S/G/Y/R/B/O NT_008046AC026561958060691      
S/G/Y/R/B/O NT_008046AP004287959784113WI-44888381.001 AC016285, AC023373, AC108924, AP004287
S/G/Y/R/B/O NT_008046AP004389960137643D8S17568382.001 AC016285, AC023373
S/G/Y/R/B/O NT_008046AP004389960254823WI-98268383.001 AC016285, AC023373, AP004389
S/G/Y/R/B/O NT_008046AP004389960409463D8S18228384.001 AC016285, AC023373
S/G/Y/R/B/O NT_008046AC068102961095513CHLC.GATA13F058385.001 AC016285, AC023373, AC068102
S/G/Y/R/B/O NT_008046AC012339963401873WI-36168386.001AC007992, AC007992, AC012339
S/G/Y/R/B/O NT_008046AC007992963662863      
S/G/Y/R/B/O NT_008046AP003465965574743WI-7092X155.001 AC068091, AP003465
S/G/Y/R/B/O NT_008046AP003465966034553D8S17728387.001 AC068091, AP003465
S/G/Y/R/B/O NT_008046AP003548967541253AFMB044ZF58390.001 AC016250, AC025207, AP003548


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AP003477968427493      
S/G/Y/R/B/O NT_008046AC010859971318142WI-43588388.001 AC010859, AC084223
S/G/Y/R/B/O NT_008046AC010859971886502AFM198ZF10P8389.001 AC010859
S/G/Y/R/B/O NT_008046AP003112971895683      
S/G/Y/R/B/O NT_008046AP003111973316233      
S/G/Y/R/B/O NT_008046AP003117974698323WI-61648391.001 AC011175, AC013817, AP003117
S/G/Y/R/B/O NT_008046AP003115975132153      
S/G/Y/R/B/O NT_008046AP003113976014693      
S/G/Y/R/B/O NT_008046AP003116977529923      
S/G/Y/R/B/O NT_008046AP002982978135053      
S/G/Y/R/B/O NT_008046AP003114979734763      
S/G/Y/R/B/O NT_008046AP003357980054433      
S/G/Y/R/B/O NT_008046AP002906981714203      
S/G/Y/R/B/O NT_008046AP003352983692123WI-28148392.001 AB070559, AC019236, AC021923, AC091075, AP003352
S/G/Y/R/B/O NT_008046AP003352983716403WI-14178398.001 AB070559, AC019236, AC021923, AC091075, AP003352
S/G/Y/R/B/O NT_008046AP003439984591003WI-38678393.001 AC021923, AP003439
S/G/Y/R/B/O NT_008046AP003439984823833D8S17788399.001 AC018790, AC021923, AP003439
S/G/Y/R/B/O NT_008046AP003439984848413WI-93318394.001 AC018790, AC021923, AP003439
S/G/Y/R/B/O NT_008046AP003439985495033WI-56668395.001 AC018790, AP003439
S/G/Y/R/B/O NT_008046AP003439985597723D8S5068397.001 AC018790, AP003439
S/G/Y/R/B/O NT_008046AP003438986966823D8S2578342.001 AP003438
S/G/Y/R/B/O NT_008046AP003355987812423STSG-100678396.001 AP003355
S/G/Y/R/B/O NT_008046AP002087988510443      
S/G/Y/R/B/O NT_008046AP003467989307233      
S/G/Y/R/B/O NT_008046AP003551990656353      
S/G/Y/R/B/O NT_008046AP003691991574793      
S/G/Y/R/B/O NT_008046AC104986992703002      
S/G/Y/R/B/O NT_008046AP004294993417573      
S/G/Y/R/B/O NT_008046AP004709994527653      
S/G/Y/R/B/O NT_008046AP004290994666103      
S/G/Y/R/B/O NT_008046AP004289995989323CHLC.ATC2B128400.001 AC104980, AC105193, AP004289
S/G/Y/R/B/O NT_008046AC026827997220623      
S/G/Y/R/B/O NT_008046AC023933998831183      
S/G/Y/R/B/O NT_008046AC018442999836752D8S17898401.001 AC018442, AP001573
S/G/Y/R/B/O NT_008046AP0034731001721303WI-51308402.001AC105328, AC105328, AP003473
S/G/Y/R/B/O NT_008046AC1100121002711212      
S/G/Y/R/B/O NT_008046AC0260891003057611      
S/G/Y/R/B/O NT_008046AC0905781003097331      
S/G/Y/R/B/O NT_008046AC0790631005147301      
S/G/Y/R/B/O NT_008046AC0901461005288481      
S/G/Y/R/B/O NT_008046AC0911841007254062AFM289ZB58348.001 AC023117, AC087822
S/G/Y/R/B/O NT_008046AC0186761007720683      
S/G/Y/R/B/O NT_008046AC1050261009236843      
S/G/Y/R/B/O NT_008046AC0224851010285091      
S/G/Y/R/B/O NT_008046AC0320021010722313      
S/G/Y/R/B/O NT_008046AC0050661012369473D8S2738343.001 AC005066
S/G/Y/R/B/O NT_008046AC0050661013076833WI-20308345.001AC037450, AC005066, AC021991, AC037450, AC090149
S/G/Y/R/B/O NT_008046AC0374501013697483WI-95628346.001AC090575, AC021991, AC037450, AC090149, AC090575
S/G/Y/R/B/O NT_008046AC0905751014592253      
S/G/Y/R/B/O NT_008046AC0909801015061742      


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AC0907971016573393      
S/G/Y/R/B/O NT_008046AC0272591017323743      
S/G/Y/R/B/O NT_008046AC0905681018556173WI-42298347.001AC024063, AC024063, AC090568
S/G/Y/R/B/O NT_008046AC0240631019773591      
S/G/Y/R/B/O NT_008046AC0693531019913013      
S/G/Y/R/B/O NT_008046AF1178291023498243WI-74418351.001 AC004003, AF117829
S/G/Y/R/B/O NT_008046AF1178291023739733AFM275YF18350.001 AC004003, AF117829
S/G/Y/R/B/O NT_008046AF1178291023740033D8S888352.001 AF117829
S/G/Y/R/B/O NT_008046AC0741781024683093      
S/G/Y/R/B/O NT_008046AC0046121025961803WI-89758354.001AF068862, AC004612, AF049895, AF068862, M19879
S/G/Y/R/B/O NT_008046AF0688621025997923      
S/G/Y/R/B/O NT_008046AF0707171026321553      
S/G/Y/R/B/O NT_008046AC0040831027577713D8S18118353.001 AC004083, AF049895
S/G/Y/R/B/O NT_008046AC0799671028740933      
S/G/Y/R/B/O NT_008046AC0227211030857191WI-43878422.001 AC022721
S/G/Y/R/B/O NT_008046AC0410391031395842D8S17038421.001 AC041039, AC090466
S/G/Y/R/B/O NT_008046AC0410391031415272GCT17F048420.001 AC041039, AC090466
S/G/Y/R/B/O NT_008046AC0215461032366152      
S/G/Y/R/B/O NT_008046AC0901421033782361D8S5568418.001AC021546, AC021546, AC090142
S/G/Y/R/B/O NT_008046AC0901421033852341D8S17848419.001AC021546, AC021546, AC069127, AC090142
S/G/Y/R/B/O NT_008046AC0214981036176733D8S18448417.001 AC021498, AP004711
S/G/Y/R/B/O NT_008046AP0047151036797953      
S/G/Y/R/B/O NT_008046AP0047161037253603      
S/G/Y/R/B/O NT_008046AC0873701038345221      
S/G/Y/R/B/O NT_008046AP0045821039228173      
S/G/Y/R/B/O NT_008046AP0028471039648503      
S/G/Y/R/B/O NT_008046AP0034711040405043      
S/G/Y/R/B/O NT_008046AP0028491042247073WI-63078415.001 AC016832, AP002849
S/G/Y/R/B/O NT_008046AP0028491042366553WI-51428416.001 AC016832, AP002849
S/G/Y/R/B/O NT_008046AP0047121043734923      
S/G/Y/R/B/O NT_008046AP0047141044440973      
S/G/Y/R/B/O NT_008046AP0015721044745333      
S/G/Y/R/B/O NT_008046AC0258361045428492      
S/G/Y/R/B/O NT_008046AC0906861046286623      
S/G/Y/R/B/O NT_008046AC0077511047829083      
S/G/Y/R/B/O NT_008046AC0904481049257223      
S/G/Y/R/B/O NT_008046AC0122131049593393WI-26308414.001AC090448, AC012213, AC090448, AP004288
S/G/Y/R/B/O NT_008046AC0693511050940333      
S/G/Y/R/B/O NT_008046AC0253701052462913WI-69048413.001 AC025370, AF363578
S/G/Y/R/B/O NT_008046AP0035501053294813      
S/G/Y/R/B/O NT_008046AP0036981054698313      
S/G/Y/R/B/O NT_008046AP0033541054715643      
S/G/Y/R/B/O NT_008046AP0036961056198513      
S/G/Y/R/B/O NT_008046AP0033561056261073      
S/G/Y/R/B/O NT_008046AP0028511057963333D8S2768412.001 AC011777, AP002851
S/G/Y/R/B/O NT_008046AP0028521060431693D8S5458411.001 AP002852
S/G/Y/R/B/O NT_008046AP0029811060444693      
S/G/Y/R/B/O NT_008046AP0029071062000283      
S/G/Y/R/B/O NT_008046AP0013281062664093      
S/G/Y/R/B/O NT_008046AP0015751064119433      


  NT_008046 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008046AP0012061064670553      
S/G/Y/R/B/O NT_008046AP0013291066238973      
S/G/Y/R/B/O NT_008046AP0004261067125333AFM186XB23735.001AP001329, AP000426, AP001329
S/G/Y/R/B/O NT_008046AP0012071068980593      
S/G/Y/R/B/O NT_008046AP0012081070372673      
S/G/Y/R/B/O NT_008046AP0013301071155323      
S/G/Y/R/B/O NT_008046AP0034691072728023      
S/G/Y/R/B/O NT_008046AP0036891073680153      
S/G/Y/R/B/O NT_008046AP0042931075198483      
S/G/Y/R/B/O NT_008046AP0041951076202523      
S/G/Y/R/B/O NT_008046AP0012051078439683WI-41758409.001 AC084086, AP001205
S/G/Y/R/B/O NT_008046AP0004241078675313      
S/G/Y/R/B/O NT_008046AP0034721080271533D8S17628408.001AP000424, AP000424, AP003472
S/G/Y/R/B/O NT_008046AP0034721080514883D8S5468410.001 AP003472
S/G/Y/R/B/O NT_008046AP0034721080649533D8S18088407.001 AP003472
S/G/Y/R/B/O NT_008046AP0034721080790113D8S5598406.001 AF235095, AP003472
S/G/Y/R/B/O NT_008046AP0015741081802923WI-27198405.001 AC013608, AP001574
S/G/Y/R/B/O NT_008046AC0256471082344872WI-72568403.001AP001574, AC013608, AC025647, AP001574
S/G/Y/R/B/O NT_008046AC0256471083223312WI-88928404.001 AC025647, AF286112, AJ252078, AP003474
S/G/Y/R/B/O NT_008046AC0215901083271542