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  Chromosome 12 - YAC Map - Single Contig
 

Chromosome 12 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009714
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009714AC06083285478591      
S/G/Y/R/B/O NT_009714AC09282885507091      
S/G/Y/R/B/O NT_009714AC02490287655201WI-9751277.002AC010882, AC087314, AC010882, AC024902, AC087314
S/G/Y/R/B/O NT_009714AC01088287272421      
S/G/Y/R/B/O NT_009714AC02667587987171      
S/G/Y/R/B/O NT_009714AC08731488568931WI-9751277.002AC010882, AC024902, AC010882, AC024902, AC087314
S/G/Y/R/B/O NT_009714AC09180589592573      
S/G/Y/R/B/O NT_009714AC00811491236613      
S/G/Y/R/B/O NT_009714AC00754592586733UTR-98421262.001 AC007545
S/G/Y/R/B/O NT_009714AC01016893327403      
S/G/Y/R/B/O NT_009714AC00765595879873WI-78681263.001 AC007655
S/G/Y/R/B/O NT_009714AC02061396153023      
S/G/Y/R/B/O NT_009714AC00754396535553      
S/G/Y/R/B/O NT_009714AC02233498635873      
S/G/Y/R/B/O NT_009714AC092183101266083CHLC.GGAT12A031264.001AC007542, AC007542, AC021644, AC092183
S/G/Y/R/B/O NT_009714AC007542101416303      
S/G/Y/R/B/O NT_009714AC092753102601293      
S/G/Y/R/B/O NT_009714AC073651103424883      
S/G/Y/R/B/O NT_009714AC022073105060533      
S/G/Y/R/B/O NT_009714AC018654106880343      
S/G/Y/R/B/O NT_009714AC073574108292353D12S17281265.002AC055742, AC092109, AC019285, AC055742, AC068772, AC073574, AC092109, AC092450
S/G/Y/R/B/O NT_009714AC092109109394021      
S/G/Y/R/B/O NT_009714AC007528109394143      
S/G/Y/R/B/O NT_009714AC007552111898933D12S17151266.001 AC007552
S/G/Y/R/B/O NT_009714AC007529113771613D12S16301267.001 AC007529
S/G/Y/R/B/O NT_009714AC024095115001653AFM338WH51269.001AC023512, AC023087, AC023512, AC024095
S/G/Y/R/B/O NT_009714AC024095115079523CHLC.GATA6C01.4061268.001AC023512, AC023087, AC023512, AC024095
S/G/Y/R/B/O NT_009714AC023512115103963      
S/G/Y/R/B/O NT_009714AC013827116664781      
S/G/Y/R/B/O NT_009714AC092793116955373      
S/G/Y/R/B/O NT_009714AC092110117715373      
S/G/Y/R/B/O NT_009714AC092866119510071      
S/G/Y/R/B/O NT_009714AC092452119560423      
S/G/Y/R/B/O NT_009714AC090672120275483      
S/G/Y/R/B/O NT_009714AC048352120599903AFM211ZB21272.001AC092866, AC026096, AC048352, AC073956, AC087317, AC092866
S/G/Y/R/B/O NT_009714AC048352121078873CHLC.GATA30D061271.001 AC026096, AC048352, AC073956
S/G/Y/R/B/O NT_009714AC048352121486333D12S3631270.001 AC048352
S/G/Y/R/B/O NT_009714AC087321122423403      
S/G/Y/R/B/O NT_009714AC093950123613443      
S/G/Y/R/B/O NT_009714AC087774123821383      
S/G/Y/R/B/O NT_009714AC087259125941993D12S15951273.001AC073504, AC073504, AC087259
S/G/Y/R/B/O NT_009714AC073504126935493      
S/G/Y/R/B/O NT_009714AC087320127338983      
S/G/Y/R/B/O NT_009714AC087240127949803      
S/G/Y/R/B/O NT_009714AC092851129910431      
S/G/Y/R/B/O NT_009714AC007619131278513D12S3581250.001AC092824, AC007619, AC092824
S/G/Y/R/B/O NT_009714AC092824131753151      
S/G/Y/R/B/O NT_009714AC008115132716583      
S/G/Y/R/B/O NT_009714AC007215134280861WI-39851252.001 AC007215
S/G/Y/R/B/O NT_009714AC007688135817173AFM276WA91253.001 AC007688


  NT_009714 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009714AC023790136474673WI-26851251.001AC079628, AC023790, AC079628
S/G/Y/R/B/O NT_009714AC079628136917271CHLC.GAAT11C091256.001 AC079628
S/G/Y/R/B/O NT_009714AC079628152845681D12S15801254.001 AC079628
S/G/Y/R/B/O NT_009714AC079628152859861WI-55821255.001 AC079628
S/G/Y/R/B/O NT_009714AC017041138306961      
S/G/Y/R/B/O NT_009714AC016899138901621      
S/G/Y/R/B/O NT_009714AC087236138907523      
S/G/Y/R/B/O NT_009714AC091815139200193      
S/G/Y/R/B/O NT_009714AC023940140771682      
S/G/Y/R/B/O NT_009714AC024092142158563D12S3101276.001 AC024092
S/G/Y/R/B/O NT_009714AC024092143026213WI-98811275.001 AC024092, AC024553
S/G/Y/R/B/O NT_009714AC024092143157233CHLC.GATA31F051274.001 AC024092, AC024553
S/G/Y/R/B/O NT_009714AC087234143591493      
S/G/Y/R/B/O NT_009714AC092831144039633      
S/G/Y/R/B/O NT_009714AC087244145338813      
S/G/Y/R/B/O NT_009714AC087260147593251WI-107911287.001 AC022359, AC087260
S/G/Y/R/B/O NT_009714AC092864148781623WI-108171288.001 AC092864
S/G/Y/R/B/O NT_009714AC087319150375981D12S15911289.001AC112915, AC087319, AC112915
S/G/Y/R/B/O NT_009714AC112915150511871      
S/G/Y/R/B/O NT_009714AC090675151189281      
S/G/Y/R/B/O NT_009714AC026134152434701      
S/G/Y/R/B/O NT_009714AC022276152986903      
S/G/Y/R/B/O NT_009714AC011594155275373WI-9911259.001 AC011594, AC021065
S/G/Y/R/B/O NT_009714AC007527155587923D12S3201257.001 AC007527, AC021065
S/G/Y/R/B/O NT_009714AC007535156511593WI-79721260.001 AC007535
S/G/Y/R/B/O NT_009714AC007535157700523D12S3641258.001AC007397, AC007397, AC007535
S/G/Y/R/B/O NT_009714AC007397157988753      
S/G/Y/R/B/O NT_009714AC007784158730873      
S/G/Y/R/B/O NT_009714AC007916160612473      
S/G/Y/R/B/O NT_009714AC092470162101343D12S3081261.001 AC092470
S/G/Y/R/B/O NT_009714 - CHLC.GATA21E081238.001AC007068, AC007068
S/G/Y/R/B/O NT_009714 - WI-92141239.001AC007068, AC007068
S/G/Y/R/B/O NT_009714 - CHLC.GATA69H101240.000  
S/G/Y/R/B/O NT_009714 - AFMA184ZC11241.001AC007068, AC007068
S/G/Y/R/B/O NT_009714 - D12S16741242.001AC024224, AC024224
S/G/Y/R/B/O NT_009714 - D12S771243.001AC006510, AC115676, AC006510, AC115676
S/G/Y/R/B/O NT_009714 - WI-70551244.001AC068775, AC068775, AF023840
S/G/Y/R/B/O NT_009714 - WI-92181245.001AC022075, AC068775, AC022075, AC068775, AF027164, AF238470, AJ001685
S/G/Y/R/B/O NT_009714 - WI-6641246.001AC018630, AC018630
S/G/Y/R/B/O NT_009714 - D12S891247.001AC084430, AC084430
S/G/Y/R/B/O NT_009714 - WI-43851248.001AC007537, AC007537
S/G/Y/R/B/O NT_009714 - CHLC.GATA11H081249.001AC007621, AC007621
S/G/Y/R/B/O NT_009714 - WI-12541278.000