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  Chromosome 12 - YAC Map - Single Contig
 

Chromosome 12 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009471
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009471AC069208248947133      
S/G/Y/R/B/O NT_009471AC092773250532991      
S/G/Y/R/B/O NT_009471AC092830252041643CHLC.GATA42B051290.001AC087312, AC087312
S/G/Y/R/B/O NT_009471AC087312252268513      
S/G/Y/R/B/O NT_009471AC093194253438393      
S/G/Y/R/B/O NT_009471AC023796255098613WI-108371291.001AC092867, AC023796, AC092867
S/G/Y/R/B/O NT_009471AC092867255801023WI-23971293.001AC026310, AC023815, AC026310, AC092867
S/G/Y/R/B/O NT_009471AC026310256270563D12S16171292.001AC025889, AC025889, AC026310
S/G/Y/R/B/O NT_009471AC023510257880393WI-73711294.001AC025889, AC092794, AC023510, AC025889, AC092794
S/G/Y/R/B/O NT_009471AC025889258176981      
S/G/Y/R/B/O NT_009471AC092794258199491      
S/G/Y/R/B/O NT_009471AC087239259051713      
S/G/Y/R/B/O NT_009471AC092451260831773      
S/G/Y/R/B/O NT_009471AC022367263042843WI-45201295.001AC044811, AC094009, AC022367, AC044811, AC094009
S/G/Y/R/B/O NT_009471AC044811263286561      
S/G/Y/R/B/O NT_009471AC094009263347081      
S/G/Y/R/B/O NT_009471AC019209264243643D12S15961296.001 AC019209, AC021868, AC087256
S/G/Y/R/B/O NT_009471AC024225265661463      
S/G/Y/R/B/O NT_009471AC055707266233553      
S/G/Y/R/B/O NT_009471AC022509267747073CHLC.ATA14G011297.001 AC022509
S/G/Y/R/B/O NT_009471AC022509269121973WI-67921298.001 AC022509
S/G/Y/R/B/O NT_009471AC055720270148743WI-675712100.001 AC055720
S/G/Y/R/B/O NT_009471AC055720270169323WI-73301299.001 AC055720
S/G/Y/R/B/O NT_009471AC024145270583973      
S/G/Y/R/B/O NT_009471AC023425271321603      
S/G/Y/R/B/O NT_009471AC023051273863873WI-476912101.001 AC018393, AC023051
S/G/Y/R/B/O NT_009471AC024093274923323      
S/G/Y/R/B/O NT_009471AC024896276531701WI-670012102.001AC023261, AC023261, AC024896
S/G/Y/R/B/O NT_009471AC023261276684951      
S/G/Y/R/B/O NT_009471AC092747276962083      
S/G/Y/R/B/O NT_009471AC092827278586083      
S/G/Y/R/B/O NT_009471AC092829279742443      
S/G/Y/R/B/O NT_009471AC092453280890191      
S/G/Y/R/B/O NT_009471AC068794281012463      
S/G/Y/R/B/O NT_009471AC087257281155183D12S164012103.001AC068794, AC068794
S/G/Y/R/B/O NT_009471AC087257281765473CHLC.ATA27A0612104.001AC068794, AC016008, AC021971, AC068794, AC087257
S/G/Y/R/B/O NT_009471AC009509282850453      
S/G/Y/R/B/O NT_009471AC009511284609073      
S/G/Y/R/B/O NT_009471AC008011286402103WI-778512107.001 AC008011, AC016393
S/G/Y/R/B/O NT_009471AC008011286435583WI-722012109.001 AC008011
S/G/Y/R/B/O NT_009471AC008011286441513CHLC.GATA87E0912105.001 AC008011
S/G/Y/R/B/O NT_009471AC008011286447073WI-919312106.001 AC008011
S/G/Y/R/B/O NT_009471AC022363286781543      
S/G/Y/R/B/O NT_009471AC022364287928993      
S/G/Y/R/B/O NT_009471AC022079288662513      
S/G/Y/R/B/O NT_009471AC024939290472453      
S/G/Y/R/B/O NT_009471AC046131291057483      
S/G/Y/R/B/O NT_009471AC084754292167403      
S/G/Y/R/B/O NT_009471AC022081293930543      
S/G/Y/R/B/O NT_009471AC024255295296563CHLC.GATA70C0812110.001AC022651, AC022651, AC024255


  NT_009471 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009471AC012150298915643AFMA082XD912111.001 AC012150, AC025736
S/G/Y/R/B/O NT_009471AC009318299089933      
S/G/Y/R/B/O NT_009471AC012151301587913D12S163112113.001 AC012151, AC079846
S/G/Y/R/B/O NT_009471AC022651301876921      
S/G/Y/R/B/O NT_009471 - WI-107911287.001AC087260, AC022359, AC087260
S/G/Y/R/B/O NT_009471 - WI-108171288.001AC092864, AC092864
S/G/Y/R/B/O NT_009471 - D12S15911289.001AC087319, AC112915, AC087319, AC112915
S/G/Y/R/B/O NT_009471 - WI-716312108.001AL358334, AL358334
S/G/Y/R/B/O NT_009471 - WI-685212112.000AC009318, AC009318